Definition | Prosthecochloris aestuarii DSM 271 chromosome, complete genome. |
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Accession | NC_011059 |
Length | 2,512,923 |
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The map label for this gene is 194333243
Identifier: 194333243
GI number: 194333243
Start: 433377
End: 434081
Strand: Reverse
Name: 194333243
Synonym: Paes_0399
Alternate gene names: NA
Gene position: 434081-433377 (Counterclockwise)
Preceding gene: 194333244
Following gene: 194333242
Centisome position: 17.27
GC content: 49.79
Gene sequence:
>705_bases ATGAAAAAAGCACTATCACTCGTGATGGTATTTCTTGTTGCCGTAGCATTTTCCGCTACAGGCTACAGCGCTGACAAATA CATCAGCGGTAATATCGGCATTTCCTGGCTCAACGACTATGAGAGCTCAGAGTCACGTGACGGCTCTTTTATACCAAACA CCGGTCTTTTTGAATTCGGCAGCGGCCTGACACTTGCAGCAGCATTCGGCTGTGATTACGGCGACTACCGTGCTGAAGCT GAAATCGGCTACCAGTCCGGCGATGTTGACACCTTCGCGTTTGGAACAGGTGAGAGGGATCCTTTTGCTATGGATATGAC CGGCGATGTCACTATTCTGTCGATCATGGGTAATGGCTACTACGACATTGCTCTTGGCAGCGATGTAGAACTCTTCCTCA TGGCCGGTGCAGGCTTTGCACAGGTCAACTTTGATGATGTTGCTGCTGCTGAAGAAGAACAGATGATGGGACCAAACCTT GCACTGAACGTCACCGAAGTTGCTTTTGCATACCAGATCGGTGCAGGCCTTGCTCTTCCCGTCAGTGACGGCATCATGCT CGAAGCAAAATACCGCTACTTCGCCACAACTGATTTCACCGTCAGCGATGATTTTGACCTTCCTCTCAACGGTATAGAAG ACACCGAATGGGTTGGAAATATCGAGAGCCACAGCGCAATGCTCGGTATGAGAGTCATGCTCTGA
Upstream 100 bases:
>100_bases AATCGTTCTTGAAAATCTTGTATCTTAACGAAGAAAGCAAAGCGAAATCCTGCTTTGCTATCTATCACTCACTTCACGTA AAACAGAAACGGAGAGAACA
Downstream 100 bases:
>100_bases TAGGTTACGTACCTGCATAGAAGACAAAAAGGCGGCCTCTTCCAGGGTCGCCTTTTCTTTTTAGTCGGAAAGTCGTTTTT CTTTTCTCAGGAGATTGTCT
Product: hypothetical protein
Products: NA
Alternate protein names: Porin Opacity Type; Outer Surface Protein; Tia Invasion Determinant-Related Protein; Hemagglutinin-Related Protein
Number of amino acids: Translated: 234; Mature: 234
Protein sequence:
>234_residues MKKALSLVMVFLVAVAFSATGYSADKYISGNIGISWLNDYESSESRDGSFIPNTGLFEFGSGLTLAAAFGCDYGDYRAEA EIGYQSGDVDTFAFGTGERDPFAMDMTGDVTILSIMGNGYYDIALGSDVELFLMAGAGFAQVNFDDVAAAEEEQMMGPNL ALNVTEVAFAYQIGAGLALPVSDGIMLEAKYRYFATTDFTVSDDFDLPLNGIEDTEWVGNIESHSAMLGMRVML
Sequences:
>Translated_234_residues MKKALSLVMVFLVAVAFSATGYSADKYISGNIGISWLNDYESSESRDGSFIPNTGLFEFGSGLTLAAAFGCDYGDYRAEA EIGYQSGDVDTFAFGTGERDPFAMDMTGDVTILSIMGNGYYDIALGSDVELFLMAGAGFAQVNFDDVAAAEEEQMMGPNL ALNVTEVAFAYQIGAGLALPVSDGIMLEAKYRYFATTDFTVSDDFDLPLNGIEDTEWVGNIESHSAMLGMRVML >Mature_234_residues MKKALSLVMVFLVAVAFSATGYSADKYISGNIGISWLNDYESSESRDGSFIPNTGLFEFGSGLTLAAAFGCDYGDYRAEA EIGYQSGDVDTFAFGTGERDPFAMDMTGDVTILSIMGNGYYDIALGSDVELFLMAGAGFAQVNFDDVAAAEEEQMMGPNL ALNVTEVAFAYQIGAGLALPVSDGIMLEAKYRYFATTDFTVSDDFDLPLNGIEDTEWVGNIESHSAMLGMRVML
Specific function: Unknown
COG id: COG3637
COG function: function code M; Opacity protein and related surface antigens
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25116; Mature: 25116
Theoretical pI: Translated: 3.61; Mature: 3.61
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 5.1 %Met (Translated Protein) 5.6 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 5.1 %Met (Mature Protein) 5.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKALSLVMVFLVAVAFSATGYSADKYISGNIGISWLNDYESSESRDGSFIPNTGLFEFG CHHHHHHHHHHHHHHHHCCCCCCCCEEEECCCCEEEECCCCCCCCCCCCCCCCCCHHHCC SGLTLAAAFGCDYGDYRAEAEIGYQSGDVDTFAFGTGERDPFAMDMTGDVTILSIMGNGY CCEEEEEEECCCCCCCEEEEEECCCCCCEEEEEECCCCCCCEEEECCCCEEEEEEECCCE YDIALGSDVELFLMAGAGFAQVNFDDVAAAEEEQMMGPNLALNVTEVAFAYQIGAGLALP EEEEECCCEEEEEEECCCEEEECHHHHHCCCHHHHCCCCEEEEHHHEEEEEECCCCEEEE VSDGIMLEAKYRYFATTDFTVSDDFDLPLNGIEDTEWVGNIESHSAMLGMRVML CCCCEEEEEEEEEEEEECCEECCCCCCCCCCCCCCHHHCCCCCCHHEEEEEECC >Mature Secondary Structure MKKALSLVMVFLVAVAFSATGYSADKYISGNIGISWLNDYESSESRDGSFIPNTGLFEFG CHHHHHHHHHHHHHHHHCCCCCCCCEEEECCCCEEEECCCCCCCCCCCCCCCCCCHHHCC SGLTLAAAFGCDYGDYRAEAEIGYQSGDVDTFAFGTGERDPFAMDMTGDVTILSIMGNGY CCEEEEEEECCCCCCCEEEEEECCCCCCEEEEEECCCCCCCEEEECCCCEEEEEEECCCE YDIALGSDVELFLMAGAGFAQVNFDDVAAAEEEQMMGPNLALNVTEVAFAYQIGAGLALP EEEEECCCEEEEEEECCCEEEECHHHHHCCCHHHHCCCCEEEEHHHEEEEEECCCCEEEE VSDGIMLEAKYRYFATTDFTVSDDFDLPLNGIEDTEWVGNIESHSAMLGMRVML CCCCEEEEEEEEEEEEECCEECCCCCCCCCCCCCCHHHCCCCCCHHEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA