Definition Prosthecochloris aestuarii DSM 271 chromosome, complete genome.
Accession NC_011059
Length 2,512,923

Click here to switch to the map view.

The map label for this gene is 194333243

Identifier: 194333243

GI number: 194333243

Start: 433377

End: 434081

Strand: Reverse

Name: 194333243

Synonym: Paes_0399

Alternate gene names: NA

Gene position: 434081-433377 (Counterclockwise)

Preceding gene: 194333244

Following gene: 194333242

Centisome position: 17.27

GC content: 49.79

Gene sequence:

>705_bases
ATGAAAAAAGCACTATCACTCGTGATGGTATTTCTTGTTGCCGTAGCATTTTCCGCTACAGGCTACAGCGCTGACAAATA
CATCAGCGGTAATATCGGCATTTCCTGGCTCAACGACTATGAGAGCTCAGAGTCACGTGACGGCTCTTTTATACCAAACA
CCGGTCTTTTTGAATTCGGCAGCGGCCTGACACTTGCAGCAGCATTCGGCTGTGATTACGGCGACTACCGTGCTGAAGCT
GAAATCGGCTACCAGTCCGGCGATGTTGACACCTTCGCGTTTGGAACAGGTGAGAGGGATCCTTTTGCTATGGATATGAC
CGGCGATGTCACTATTCTGTCGATCATGGGTAATGGCTACTACGACATTGCTCTTGGCAGCGATGTAGAACTCTTCCTCA
TGGCCGGTGCAGGCTTTGCACAGGTCAACTTTGATGATGTTGCTGCTGCTGAAGAAGAACAGATGATGGGACCAAACCTT
GCACTGAACGTCACCGAAGTTGCTTTTGCATACCAGATCGGTGCAGGCCTTGCTCTTCCCGTCAGTGACGGCATCATGCT
CGAAGCAAAATACCGCTACTTCGCCACAACTGATTTCACCGTCAGCGATGATTTTGACCTTCCTCTCAACGGTATAGAAG
ACACCGAATGGGTTGGAAATATCGAGAGCCACAGCGCAATGCTCGGTATGAGAGTCATGCTCTGA

Upstream 100 bases:

>100_bases
AATCGTTCTTGAAAATCTTGTATCTTAACGAAGAAAGCAAAGCGAAATCCTGCTTTGCTATCTATCACTCACTTCACGTA
AAACAGAAACGGAGAGAACA

Downstream 100 bases:

>100_bases
TAGGTTACGTACCTGCATAGAAGACAAAAAGGCGGCCTCTTCCAGGGTCGCCTTTTCTTTTTAGTCGGAAAGTCGTTTTT
CTTTTCTCAGGAGATTGTCT

Product: hypothetical protein

Products: NA

Alternate protein names: Porin Opacity Type; Outer Surface Protein; Tia Invasion Determinant-Related Protein; Hemagglutinin-Related Protein

Number of amino acids: Translated: 234; Mature: 234

Protein sequence:

>234_residues
MKKALSLVMVFLVAVAFSATGYSADKYISGNIGISWLNDYESSESRDGSFIPNTGLFEFGSGLTLAAAFGCDYGDYRAEA
EIGYQSGDVDTFAFGTGERDPFAMDMTGDVTILSIMGNGYYDIALGSDVELFLMAGAGFAQVNFDDVAAAEEEQMMGPNL
ALNVTEVAFAYQIGAGLALPVSDGIMLEAKYRYFATTDFTVSDDFDLPLNGIEDTEWVGNIESHSAMLGMRVML

Sequences:

>Translated_234_residues
MKKALSLVMVFLVAVAFSATGYSADKYISGNIGISWLNDYESSESRDGSFIPNTGLFEFGSGLTLAAAFGCDYGDYRAEA
EIGYQSGDVDTFAFGTGERDPFAMDMTGDVTILSIMGNGYYDIALGSDVELFLMAGAGFAQVNFDDVAAAEEEQMMGPNL
ALNVTEVAFAYQIGAGLALPVSDGIMLEAKYRYFATTDFTVSDDFDLPLNGIEDTEWVGNIESHSAMLGMRVML
>Mature_234_residues
MKKALSLVMVFLVAVAFSATGYSADKYISGNIGISWLNDYESSESRDGSFIPNTGLFEFGSGLTLAAAFGCDYGDYRAEA
EIGYQSGDVDTFAFGTGERDPFAMDMTGDVTILSIMGNGYYDIALGSDVELFLMAGAGFAQVNFDDVAAAEEEQMMGPNL
ALNVTEVAFAYQIGAGLALPVSDGIMLEAKYRYFATTDFTVSDDFDLPLNGIEDTEWVGNIESHSAMLGMRVML

Specific function: Unknown

COG id: COG3637

COG function: function code M; Opacity protein and related surface antigens

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 25116; Mature: 25116

Theoretical pI: Translated: 3.61; Mature: 3.61

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
5.1 %Met     (Translated Protein)
5.6 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
5.1 %Met     (Mature Protein)
5.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKALSLVMVFLVAVAFSATGYSADKYISGNIGISWLNDYESSESRDGSFIPNTGLFEFG
CHHHHHHHHHHHHHHHHCCCCCCCCEEEECCCCEEEECCCCCCCCCCCCCCCCCCHHHCC
SGLTLAAAFGCDYGDYRAEAEIGYQSGDVDTFAFGTGERDPFAMDMTGDVTILSIMGNGY
CCEEEEEEECCCCCCCEEEEEECCCCCCEEEEEECCCCCCCEEEECCCCEEEEEEECCCE
YDIALGSDVELFLMAGAGFAQVNFDDVAAAEEEQMMGPNLALNVTEVAFAYQIGAGLALP
EEEEECCCEEEEEEECCCEEEECHHHHHCCCHHHHCCCCEEEEHHHEEEEEECCCCEEEE
VSDGIMLEAKYRYFATTDFTVSDDFDLPLNGIEDTEWVGNIESHSAMLGMRVML
CCCCEEEEEEEEEEEEECCEECCCCCCCCCCCCCCHHHCCCCCCHHEEEEEECC
>Mature Secondary Structure
MKKALSLVMVFLVAVAFSATGYSADKYISGNIGISWLNDYESSESRDGSFIPNTGLFEFG
CHHHHHHHHHHHHHHHHCCCCCCCCEEEECCCCEEEECCCCCCCCCCCCCCCCCCHHHCC
SGLTLAAAFGCDYGDYRAEAEIGYQSGDVDTFAFGTGERDPFAMDMTGDVTILSIMGNGY
CCEEEEEEECCCCCCCEEEEEECCCCCCEEEEEECCCCCCCEEEECCCCEEEEEEECCCE
YDIALGSDVELFLMAGAGFAQVNFDDVAAAEEEQMMGPNLALNVTEVAFAYQIGAGLALP
EEEEECCCEEEEEEECCCEEEECHHHHHCCCHHHHCCCCEEEEHHHEEEEEECCCCEEEE
VSDGIMLEAKYRYFATTDFTVSDDFDLPLNGIEDTEWVGNIESHSAMLGMRVML
CCCCEEEEEEEEEEEEECCEECCCCCCCCCCCCCCHHHCCCCCCHHEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA