Definition | Prosthecochloris aestuarii DSM 271 chromosome, complete genome. |
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Accession | NC_011059 |
Length | 2,512,923 |
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The map label for this gene is 194332978
Identifier: 194332978
GI number: 194332978
Start: 137396
End: 137974
Strand: Reverse
Name: 194332978
Synonym: Paes_0131
Alternate gene names: NA
Gene position: 137974-137396 (Counterclockwise)
Preceding gene: 194332989
Following gene: 194332974
Centisome position: 5.49
GC content: 50.09
Gene sequence:
>579_bases ATGACACGTCTCAACGAACATGATCACGACAAGATGAACAGGATATCGAACGCACTTCTCATAGCGCTTTTCACCCTTCT GCTTCTCGGTCCGACAGCGCTGGCCGCAAACCCGCAGGAGAATTTCAAAACAGGGTATGAACGCCATCAGAGCGGACGAC TCAATGATGCCATCAGCTATTACAACAAGGCTATCAATGCCAACCCGTCATACGTGCTCGCATACCAGATGCGCGCAGCT GCATGGCACCAGAAAAAAGAGCACAGCCAGGCCAGAGCTGATTACTCGAAAGTCATTGAGCTCGGCGATCCTTTTTTCAA GGCCGTAGGCTACTTCAACCGCGGGATCGTCAACTACGACGACGGCCGGTTCACCCAGGCAATCATGGATTTAACCGAAG CCATAAGTCGTGACCATAAAATGACACAGGCATATGTACACCGGGGCATAGCCAAAAGCAAAATCGGGGACAAAAAAGGT CAGATCAAGGATTTTACCTATGCAGCGAAGTTTGGCGATAAAAAGGTCAGAAACTGGCTTGAAACGCACGCCCCTCATGT TCTGAAGCAGAAGCGGTAA
Upstream 100 bases:
>100_bases GGGATTCCGGTATCTGTGCTCCATCCGCCTTGTCTTCAGCTCGCTCACGACAATTAATAAAGCTACCCTTTACTATTCCA AAAAGAGTGTTACTTTTTTG
Downstream 100 bases:
>100_bases CCCCTTTACCGCTTCCTGCAGCAGGTCTGCGCCCTAAAAACCGAACTGACGGGTATCGACCCACTCCATGCTCAGGAGTG ACCAGAAATCGACGGCAAGC
Product: TPR repeat-containing protein
Products: NA
Alternate protein names: Tetratricopeptide TPR_2 Repeat Protein; Tetratricopeptide Repeat Domain Protein; TPR Domain-Containing Protein; Peptidase; TPR Domain Protein; Tetratricopeptide Repeat-Containing Protein; TPR Repeat- And Protein Kinase Domain-Containing Protein; Pentapeptide Repeat-Containing Serine/Threonine Kinase; TPR Repeat-Containing Serine/Threonin Protein Kinase; TPR Repeat-Containing Protein Kinase
Number of amino acids: Translated: 192; Mature: 191
Protein sequence:
>192_residues MTRLNEHDHDKMNRISNALLIALFTLLLLGPTALAANPQENFKTGYERHQSGRLNDAISYYNKAINANPSYVLAYQMRAA AWHQKKEHSQARADYSKVIELGDPFFKAVGYFNRGIVNYDDGRFTQAIMDLTEAISRDHKMTQAYVHRGIAKSKIGDKKG QIKDFTYAAKFGDKKVRNWLETHAPHVLKQKR
Sequences:
>Translated_192_residues MTRLNEHDHDKMNRISNALLIALFTLLLLGPTALAANPQENFKTGYERHQSGRLNDAISYYNKAINANPSYVLAYQMRAA AWHQKKEHSQARADYSKVIELGDPFFKAVGYFNRGIVNYDDGRFTQAIMDLTEAISRDHKMTQAYVHRGIAKSKIGDKKG QIKDFTYAAKFGDKKVRNWLETHAPHVLKQKR >Mature_191_residues TRLNEHDHDKMNRISNALLIALFTLLLLGPTALAANPQENFKTGYERHQSGRLNDAISYYNKAINANPSYVLAYQMRAAA WHQKKEHSQARADYSKVIELGDPFFKAVGYFNRGIVNYDDGRFTQAIMDLTEAISRDHKMTQAYVHRGIAKSKIGDKKGQ IKDFTYAAKFGDKKVRNWLETHAPHVLKQKR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21998; Mature: 21867
Theoretical pI: Translated: 10.26; Mature: 10.26
Prosite motif: PS50005 TPR ; PS50293 TPR_REGION
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTRLNEHDHDKMNRISNALLIALFTLLLLGPTALAANPQENFKTGYERHQSGRLNDAISY CCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHCCCCHHHHHHHHHHHHCCCHHHHHHH YNKAINANPSYVLAYQMRAAAWHQKKEHSQARADYSKVIELGDPFFKAVGYFNRGIVNYD HHHHCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCEECC DGRFTQAIMDLTEAISRDHKMTQAYVHRGIAKSKIGDKKGQIKDFTYAAKFGDKKVRNWL CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCHHHHHHHH ETHAPHVLKQKR HHHCCHHHHCCC >Mature Secondary Structure TRLNEHDHDKMNRISNALLIALFTLLLLGPTALAANPQENFKTGYERHQSGRLNDAISY CCCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHCCCCHHHHHHHHHHHHCCCHHHHHHH YNKAINANPSYVLAYQMRAAAWHQKKEHSQARADYSKVIELGDPFFKAVGYFNRGIVNYD HHHHCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCEECC DGRFTQAIMDLTEAISRDHKMTQAYVHRGIAKSKIGDKKGQIKDFTYAAKFGDKKVRNWL CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCHHHHHHHH ETHAPHVLKQKR HHHCCHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA