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The map label for this gene is ydeM [C]

Identifier: 194332989

GI number: 194332989

Start: 153167

End: 154600

Strand: Reverse

Name: ydeM [C]

Synonym: Paes_0142

Alternate gene names: 194332989

Gene position: 154600-153167 (Counterclockwise)

Preceding gene: 194332991

Following gene: 194332978

Centisome position: 6.15

GC content: 51.39

Gene sequence:

>1434_bases
ATGAAGCCCTGGTCACGATACAATACGCTGTTCCTGTCAGCCAGGAATGGCTGGTTTCTCTACAACGCGCTATCCGGCAT
TATGCTTGAGCTTGACGAAGCGCATTACCGCATAGCCTGTTCACTGCGTGACGCAAAGCAGCTCTCCTCTGGAGATATCG
ATAGCGGGTTCATGGAACTGCTCGAAAAAAAAGGGATTCTCGCTGAACGCCAGGATGAACAGCTCAAGCTTATGGTGTCG
CGCTATCAACGAAACGCCACCTGCTTCAGTACCGCCACGCTGAGTCTGACGATCTGTCCGACACTAGCCTGCAACTTTGC
CTGTCCCTACTGCTTCGAGCACAGTCAGAACGATGAGACGATCATGAGGGATGAAACCATAGCTGCCCTCGCTGAATTCA
TCAAGCAACATCACGATGCCAGGACGCTTACCGTAAGCTGGTACGGTGGCGAAGCAACGTTAGCCTTCGATATCATTGAA
AGGCTGACGAAGGAGTTCATCGAGCTCTATCCCGACTACGATAATGCTGGTATGGTCACCAATGCCTATCTGCTTGATCA
GGACAAAATTGAGCGGTTGAAGGCGCTGAAAATCACCTCCATACAGATAACGCTCGATGGCAGCGAAGCCACGCACAACA
AAAGGCGAATGCTGAAAAACGGCGGCGCAACCTATGAGCGCATTCTCCACAATATTGATCTCTTGATGAACTCCTCATGG
GAAGGAAGCTGTGCAATCAGGGTGAATGTCGATAAAACCAATCAGGAGGAGTACGCTGCGCTGCACACTGAACTGCTCGA
ACGCTACAAAGGAAAAGATCTGTCAGTCTATCCCGGTTATGTCAACACCTTTGAAGGGCATGGCTATAGCGATCAATGCG
GCTTCGACAATAGCGACCGGGCTGCGTTTACGCTCAACCAATATCAGAAAGAGGGCATCATTCCTAAGAACGGATTCTTC
CCCGGCAGCGGAGTGCACAACACCTGTGTTGCCACAAACCATTACTTCTATGTAGTCAGTCCTAACGGTGAGCTGTACAA
GTGCTGGGAGGATGTCGGGCAGGCACAGAGGGCTATTGGGTCCGTCCATGAAGATGAATTCGTGACCAACCCTGAACTGG
TTGCCCACTACAGCATAGGCACTGATCCCTTCAATGACTCCGGGTGCATAGCGTGCCGGGTCTTGCCTATCTGCGGTGGT
GGTTGTGTTCGGAAGCGTCTGCGCGCGCAGCACTATGGAGAAAAGGGTATCGATTACTGTTCGCCGCTCAAGGAGTCACT
TACAGACTATCTCGACGCTTATATCGACACATGGCAGACAAAACAGATTTGCGACGAAGTCCTTGGGAAGGGAGGGGCTC
CATCAATGGAACAGGGATACCGGATGGTACAACCGGAAGAAAAAGAGGGTGAAGCAGATACCATGCTCTCCTGA

Upstream 100 bases:

>100_bases
GGCGCATTTCTACCCACTCATCGCCTGTAAGATCTTTATGAGAAGATTTATTCTTATATAGCAGATCATGTACATCCCGT
CAACACTTTACCGCTTTACC

Downstream 100 bases:

>100_bases
ATCACCTTGCTCCCGGACGGCCTGTCAGGTCGTCCGGGAAGACAAGAGAGCGAATTGCCAGTCCGGTCTTACAACTTGCG
CTGTACTTGCGTGCGGACAT

Product: radical SAM domain-containing protein

Products: NA

Alternate protein names: Radical SAM Domain Protein; Arylsulfatase Regulator; Radical SAM Family Protein; Transcriptional Regulator; Arylsulfatase Regulator Fe-S Oxidoreductase; AstB/ChuR-Related Protein; Radical Sam Domain Protein; Heme Biosynthesis Related Protein; Arylsulfatase Regulatory Protein; Arylsulfatase-Activating AtsB; Regulatory Protein; Fe-S Oxidoreductase; Radical SAM

Number of amino acids: Translated: 477; Mature: 477

Protein sequence:

>477_residues
MKPWSRYNTLFLSARNGWFLYNALSGIMLELDEAHYRIACSLRDAKQLSSGDIDSGFMELLEKKGILAERQDEQLKLMVS
RYQRNATCFSTATLSLTICPTLACNFACPYCFEHSQNDETIMRDETIAALAEFIKQHHDARTLTVSWYGGEATLAFDIIE
RLTKEFIELYPDYDNAGMVTNAYLLDQDKIERLKALKITSIQITLDGSEATHNKRRMLKNGGATYERILHNIDLLMNSSW
EGSCAIRVNVDKTNQEEYAALHTELLERYKGKDLSVYPGYVNTFEGHGYSDQCGFDNSDRAAFTLNQYQKEGIIPKNGFF
PGSGVHNTCVATNHYFYVVSPNGELYKCWEDVGQAQRAIGSVHEDEFVTNPELVAHYSIGTDPFNDSGCIACRVLPICGG
GCVRKRLRAQHYGEKGIDYCSPLKESLTDYLDAYIDTWQTKQICDEVLGKGGAPSMEQGYRMVQPEEKEGEADTMLS

Sequences:

>Translated_477_residues
MKPWSRYNTLFLSARNGWFLYNALSGIMLELDEAHYRIACSLRDAKQLSSGDIDSGFMELLEKKGILAERQDEQLKLMVS
RYQRNATCFSTATLSLTICPTLACNFACPYCFEHSQNDETIMRDETIAALAEFIKQHHDARTLTVSWYGGEATLAFDIIE
RLTKEFIELYPDYDNAGMVTNAYLLDQDKIERLKALKITSIQITLDGSEATHNKRRMLKNGGATYERILHNIDLLMNSSW
EGSCAIRVNVDKTNQEEYAALHTELLERYKGKDLSVYPGYVNTFEGHGYSDQCGFDNSDRAAFTLNQYQKEGIIPKNGFF
PGSGVHNTCVATNHYFYVVSPNGELYKCWEDVGQAQRAIGSVHEDEFVTNPELVAHYSIGTDPFNDSGCIACRVLPICGG
GCVRKRLRAQHYGEKGIDYCSPLKESLTDYLDAYIDTWQTKQICDEVLGKGGAPSMEQGYRMVQPEEKEGEADTMLS
>Mature_477_residues
MKPWSRYNTLFLSARNGWFLYNALSGIMLELDEAHYRIACSLRDAKQLSSGDIDSGFMELLEKKGILAERQDEQLKLMVS
RYQRNATCFSTATLSLTICPTLACNFACPYCFEHSQNDETIMRDETIAALAEFIKQHHDARTLTVSWYGGEATLAFDIIE
RLTKEFIELYPDYDNAGMVTNAYLLDQDKIERLKALKITSIQITLDGSEATHNKRRMLKNGGATYERILHNIDLLMNSSW
EGSCAIRVNVDKTNQEEYAALHTELLERYKGKDLSVYPGYVNTFEGHGYSDQCGFDNSDRAAFTLNQYQKEGIIPKNGFF
PGSGVHNTCVATNHYFYVVSPNGELYKCWEDVGQAQRAIGSVHEDEFVTNPELVAHYSIGTDPFNDSGCIACRVLPICGG
GCVRKRLRAQHYGEKGIDYCSPLKESLTDYLDAYIDTWQTKQICDEVLGKGGAPSMEQGYRMVQPEEKEGEADTMLS

Specific function: Unknown

COG id: COG0641

COG function: function code R; Arylsulfatase regulator (Fe-S oxidoreductase)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 53827; Mature: 53827

Theoretical pI: Translated: 4.93; Mature: 4.93

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.4 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
5.7 %Cys+Met (Translated Protein)
3.4 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
5.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKPWSRYNTLFLSARNGWFLYNALSGIMLELDEAHYRIACSLRDAKQLSSGDIDSGFMEL
CCCCCCCCEEEEEECCCEEEEHHHHHHHEEECCCCEEEEEEEHHHHHCCCCCCCHHHHHH
LEKKGILAERQDEQLKLMVSRYQRNATCFSTATLSLTICPTLACNFACPYCFEHSQNDET
HHHCCCCCCCCCHHHHHHHHHHHCCCEEEEEEEEEEEECCHHHHCCCCCHHHCCCCCCCH
IMRDETIAALAEFIKQHHDARTLTVSWYGGEATLAFDIIERLTKEFIELYPDYDNAGMVT
HHHHHHHHHHHHHHHHCCCCEEEEEEEECCCEEHHHHHHHHHHHHHHHHCCCCCCCCCEE
NAYLLDQDKIERLKALKITSIQITLDGSEATHNKRRMLKNGGATYERILHNIDLLMNSSW
EEEEECHHHHHHHHHEEEEEEEEEECCCHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCC
EGSCAIRVNVDKTNQEEYAALHTELLERYKGKDLSVYPGYVNTFEGHGYSDQCGFDNSDR
CCEEEEEEEECCCCHHHHHHHHHHHHHHHCCCCCEEECCCCCCCCCCCCCCCCCCCCCCC
AAFTLNQYQKEGIIPKNGFFPGSGVHNTCVATNHYFYVVSPNGELYKCWEDVGQAQRAIG
EEEEHHHHHHCCCCCCCCCCCCCCCCCCEEEECEEEEEECCCCCHHHHHHHHHHHHHHHC
SVHEDEFVTNPELVAHYSIGTDPFNDSGCIACRVLPICGGGCVRKRLRAQHYGEKGIDYC
CCCCCCCCCCCCEEEEEECCCCCCCCCCEEEEEEEEECCCHHHHHHHHHHHCCCCCCHHH
SPLKESLTDYLDAYIDTWQTKQICDEVLGKGGAPSMEQGYRMVQPEEKEGEADTMLS
HHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCHHHCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MKPWSRYNTLFLSARNGWFLYNALSGIMLELDEAHYRIACSLRDAKQLSSGDIDSGFMEL
CCCCCCCCEEEEEECCCEEEEHHHHHHHEEECCCCEEEEEEEHHHHHCCCCCCCHHHHHH
LEKKGILAERQDEQLKLMVSRYQRNATCFSTATLSLTICPTLACNFACPYCFEHSQNDET
HHHCCCCCCCCCHHHHHHHHHHHCCCEEEEEEEEEEEECCHHHHCCCCCHHHCCCCCCCH
IMRDETIAALAEFIKQHHDARTLTVSWYGGEATLAFDIIERLTKEFIELYPDYDNAGMVT
HHHHHHHHHHHHHHHHCCCCEEEEEEEECCCEEHHHHHHHHHHHHHHHHCCCCCCCCCEE
NAYLLDQDKIERLKALKITSIQITLDGSEATHNKRRMLKNGGATYERILHNIDLLMNSSW
EEEEECHHHHHHHHHEEEEEEEEEECCCHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCC
EGSCAIRVNVDKTNQEEYAALHTELLERYKGKDLSVYPGYVNTFEGHGYSDQCGFDNSDR
CCEEEEEEEECCCCHHHHHHHHHHHHHHHCCCCCEEECCCCCCCCCCCCCCCCCCCCCCC
AAFTLNQYQKEGIIPKNGFFPGSGVHNTCVATNHYFYVVSPNGELYKCWEDVGQAQRAIG
EEEEHHHHHHCCCCCCCCCCCCCCCCCCEEEECEEEEEECCCCCHHHHHHHHHHHHHHHC
SVHEDEFVTNPELVAHYSIGTDPFNDSGCIACRVLPICGGGCVRKRLRAQHYGEKGIDYC
CCCCCCCCCCCCEEEEEECCCCCCCCCCEEEEEEEEECCCHHHHHHHHHHHCCCCCCHHH
SPLKESLTDYLDAYIDTWQTKQICDEVLGKGGAPSMEQGYRMVQPEEKEGEADTMLS
HHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCHHHCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA