| Definition | Chlorobaculum parvum NCIB 8327 chromosome, complete genome. |
|---|---|
| Accession | NC_011027 |
| Length | 2,289,249 |
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The map label for this gene is 193213602
Identifier: 193213602
GI number: 193213602
Start: 2168853
End: 2169674
Strand: Direct
Name: 193213602
Synonym: Cpar_1965
Alternate gene names: NA
Gene position: 2168853-2169674 (Clockwise)
Preceding gene: 193213597
Following gene: 193213606
Centisome position: 94.74
GC content: 57.42
Gene sequence:
>822_bases ATGAGCGAGACGAAACACGACACGCTCCGGTTCGGCATCGTCACCGACATTCACTACAACCCCGAAACCGAGACCGGCAA CCAGACGGAAGCCGGTCTCGAACGCTGCATTGAAAAGTGGACGAGCGAAGGCGTGGAGTTCGTCATCCAGCTTGGCGACC TCATCAGCCGCGAAGGCCCCGAAGCCGAGGCCGACCTCATCGCCGTGCGCGACATGCTCGCCCGCTTCAGCGGCAAAGTC TATCACGTCGCAGGCAACCACTGCCTCGCCGTGCCGCCGGAACGCTACAAAGCGATCATGGGCCTCGACAGCCTCTACTA CACCTTCAGCTCGCACGGCACCCGTTTCATCGTTCTCGACGGCATGGACGTTTCAATTGTGAACGAGCCGCAGAACAAAG CCGACCGCCACCTTTTGGAATACTACCGAGACGTCGTCAAAGCCCCCTTCTACTGCGGAGCCATCGGCACCCGCCAGCTC GACTGGCTCGTGAAAGAGCTCGACCTCGCCCTGAAAAACGAAGAACCAGTCATCATCTTCAACCACCTGCCGCTTCTCGG AGAGACCACCGACGAAAAGCACGGCCTGCTATGGAATCACGAAGAGGTCGTCGCGATCTTGTCACGATACCCGAACGTCC ACGCCTGCTTGAGCGGGCACTACCACTCCGCTGCCCAAGCCATGCGTAACGGCACTCACTTTGCCGTTCTACCAGCGTTC AGGGATTGCTTTGAAGAGCTGAATGGCTGCTGTTTTATGGGGGAATTTTCAGGAAAAAAGCTTTTCGAGTTCGTTATAAG CATGATTGACGACAAGCTGTAG
Upstream 100 bases:
>100_bases ACTACGAGCGGTTCGATGTCGAAAACGTGCTTGACGGCGACATCGACGACTACATCCAGAAGTACCTCTCCGAATTCGGC GACGCATAAACGAGGATGCC
Downstream 100 bases:
>100_bases CTTTTAGAAATTTTCCGCAAAGAAGAACAATGCCCCCAAGATTTTGACGTCACCTGTGAACGCTTTCAGGATAGCCATGA GATCAAACACCCAAAAGCGC
Product: metallophosphoesterase
Products: NA
Alternate protein names: Twin-Arginine Translocation Pathway Signal; Phosphatase Protein; Calcineurin-Like Phosphoesterase
Number of amino acids: Translated: 273; Mature: 272
Protein sequence:
>273_residues MSETKHDTLRFGIVTDIHYNPETETGNQTEAGLERCIEKWTSEGVEFVIQLGDLISREGPEAEADLIAVRDMLARFSGKV YHVAGNHCLAVPPERYKAIMGLDSLYYTFSSHGTRFIVLDGMDVSIVNEPQNKADRHLLEYYRDVVKAPFYCGAIGTRQL DWLVKELDLALKNEEPVIIFNHLPLLGETTDEKHGLLWNHEEVVAILSRYPNVHACLSGHYHSAAQAMRNGTHFAVLPAF RDCFEELNGCCFMGEFSGKKLFEFVISMIDDKL
Sequences:
>Translated_273_residues MSETKHDTLRFGIVTDIHYNPETETGNQTEAGLERCIEKWTSEGVEFVIQLGDLISREGPEAEADLIAVRDMLARFSGKV YHVAGNHCLAVPPERYKAIMGLDSLYYTFSSHGTRFIVLDGMDVSIVNEPQNKADRHLLEYYRDVVKAPFYCGAIGTRQL DWLVKELDLALKNEEPVIIFNHLPLLGETTDEKHGLLWNHEEVVAILSRYPNVHACLSGHYHSAAQAMRNGTHFAVLPAF RDCFEELNGCCFMGEFSGKKLFEFVISMIDDKL >Mature_272_residues SETKHDTLRFGIVTDIHYNPETETGNQTEAGLERCIEKWTSEGVEFVIQLGDLISREGPEAEADLIAVRDMLARFSGKVY HVAGNHCLAVPPERYKAIMGLDSLYYTFSSHGTRFIVLDGMDVSIVNEPQNKADRHLLEYYRDVVKAPFYCGAIGTRQLD WLVKELDLALKNEEPVIIFNHLPLLGETTDEKHGLLWNHEEVVAILSRYPNVHACLSGHYHSAAQAMRNGTHFAVLPAFR DCFEELNGCCFMGEFSGKKLFEFVISMIDDKL
Specific function: Unknown
COG id: COG1409
COG function: function code R; Predicted phosphohydrolases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 30884; Mature: 30753
Theoretical pI: Translated: 5.07; Mature: 5.07
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.6 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 5.1 %Cys+Met (Translated Protein) 2.6 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 4.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSETKHDTLRFGIVTDIHYNPETETGNQTEAGLERCIEKWTSEGVEFVIQLGDLISREGP CCCCCCCEEEEEEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC EAEADLIAVRDMLARFSGKVYHVAGNHCLAVPPERYKAIMGLDSLYYTFSSHGTRFIVLD CCHHHHHHHHHHHHHHCCCEEEEECCCEEECCHHHHHHHHHHHHHHHHHCCCCCEEEEEE GMDVSIVNEPQNKADRHLLEYYRDVVKAPFYCGAIGTRQLDWLVKELDLALKNEEPVIIF CCEEEEECCCCCHHHHHHHHHHHHHHCCCEEECCCCHHHHHHHHHHHHHHCCCCCCEEEE NHLPLLGETTDEKHGLLWNHEEVVAILSRYPNVHACLSGHYHSAAQAMRNGTHFAVLPAF ECCCCCCCCCCCCCCCEECHHHHHHHHHHCCCCEEHHCCCHHHHHHHHHCCCCEEEHHHH RDCFEELNGCCFMGEFSGKKLFEFVISMIDDKL HHHHHHHCCEEEEECCCCHHHHHHHHHHHHCCC >Mature Secondary Structure SETKHDTLRFGIVTDIHYNPETETGNQTEAGLERCIEKWTSEGVEFVIQLGDLISREGP CCCCCCEEEEEEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC EAEADLIAVRDMLARFSGKVYHVAGNHCLAVPPERYKAIMGLDSLYYTFSSHGTRFIVLD CCHHHHHHHHHHHHHHCCCEEEEECCCEEECCHHHHHHHHHHHHHHHHHCCCCCEEEEEE GMDVSIVNEPQNKADRHLLEYYRDVVKAPFYCGAIGTRQLDWLVKELDLALKNEEPVIIF CCEEEEECCCCCHHHHHHHHHHHHHHCCCEEECCCCHHHHHHHHHHHHHHCCCCCCEEEE NHLPLLGETTDEKHGLLWNHEEVVAILSRYPNVHACLSGHYHSAAQAMRNGTHFAVLPAF ECCCCCCCCCCCCCCCEECHHHHHHHHHHCCCCEEHHCCCHHHHHHHHHCCCCEEEHHHH RDCFEELNGCCFMGEFSGKKLFEFVISMIDDKL HHHHHHHCCEEEEECCCCHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA