| Definition | Chlorobaculum parvum NCIB 8327 chromosome, complete genome. |
|---|---|
| Accession | NC_011027 |
| Length | 2,289,249 |
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The map label for this gene is 193213606
Identifier: 193213606
GI number: 193213606
Start: 2173762
End: 2174715
Strand: Direct
Name: 193213606
Synonym: Cpar_1970
Alternate gene names: NA
Gene position: 2173762-2174715 (Clockwise)
Preceding gene: 193213602
Following gene: 193213610
Centisome position: 94.96
GC content: 59.96
Gene sequence:
>954_bases ATGAACAACACAAAACGATCGATCGTGAAAACCGCGTGGTGGCTGATGCTGCCCCTTGCCGTCTGGGGAACGCTCCTGAC GGATAATACGGCCTCAGCGGGGAAAAAGAAAACAATCCTCGAACATGCCGACTTTATCGAAGGCGGCGAAACCAGCGGTC CATCCGGCGCGGTAATCCCCTACCGCTCGGCGGTCGGCAATGTGCGCTTCCTGCACGGCAAGACAATTCTGGAGTGCGAC CGGGCAACCGACTGGCTTGAAAACGAACGAATCGACCTGAATGGCCATATCGTCATTCGGGACAACACGCTCGAAACCCG TAGCGATACCGGAACGTACGACACCCGTCGAGAGATCGGAGAGCTTTCCGGCAACGTGCGCGGACGGGTGGTCGAGGACA GTCTGACGGCAAAATCGGTGCGGGCAACCGTTGATTTGACTGGTGACAATCTCTGGCTGTTCGGCGATGCGGTGGTGTGG CAACCGGGCCGCCAGCTCAGCGGCGATACCATCCGGGTGCACCTGCGCGAAATTGACGGCAGGAAGCGGGCGGACGAACT CGAGGTGCGCGGCCACGCCTTCCTTGCCACTAAAGACACGCTCGCAACCTCCCCCTTAACCTACGACCAGCTCTCGGCCC GGCGGCTGCTGGCCCGGCTTGACGAGCGCTCTCGCCTGAAGAACGTCACGGCGACGGAGAAGGCGCAGAGCCTGTACCAC CTCTACGACGAAAAGCAGCAGCCCACGGGAGCGAACTACACCTCCGGCGCTAAAATTCGGATGTTCTTTGTCGAAGGCAA GTTGAGCCGGATTCTGACCACCGGAAACCCGCTCGGTAAGGAGTATCCGAACTCGATGCGGGAAAGTCGGGAGATCGACC TGCCGGGCTTCAGGCTGCGCGACAAGGAGCGTCCGGTTTTCGAGCCCCATAGCGACCAAAAAGGTCAAGATTAG
Upstream 100 bases:
>100_bases CTGCGCGTTCCTGGGCAATCAAGACAATTTTTTTCACACCGGGTAGCTTTAGTACATTAAACGATTGAACGTTAACCGCA GGAAACGCAAGCCCAGCCGC
Downstream 100 bases:
>100_bases AACATAGCTCCCATTCTGAGATGCAAGTCGGCTGGGCCTTCCCCAAAGCTTTTTAGGTATCGTTGACACCTTTGCGAACC CACTCTTGCTCTAATCGATA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 317; Mature: 317
Protein sequence:
>317_residues MNNTKRSIVKTAWWLMLPLAVWGTLLTDNTASAGKKKTILEHADFIEGGETSGPSGAVIPYRSAVGNVRFLHGKTILECD RATDWLENERIDLNGHIVIRDNTLETRSDTGTYDTRREIGELSGNVRGRVVEDSLTAKSVRATVDLTGDNLWLFGDAVVW QPGRQLSGDTIRVHLREIDGRKRADELEVRGHAFLATKDTLATSPLTYDQLSARRLLARLDERSRLKNVTATEKAQSLYH LYDEKQQPTGANYTSGAKIRMFFVEGKLSRILTTGNPLGKEYPNSMRESREIDLPGFRLRDKERPVFEPHSDQKGQD
Sequences:
>Translated_317_residues MNNTKRSIVKTAWWLMLPLAVWGTLLTDNTASAGKKKTILEHADFIEGGETSGPSGAVIPYRSAVGNVRFLHGKTILECD RATDWLENERIDLNGHIVIRDNTLETRSDTGTYDTRREIGELSGNVRGRVVEDSLTAKSVRATVDLTGDNLWLFGDAVVW QPGRQLSGDTIRVHLREIDGRKRADELEVRGHAFLATKDTLATSPLTYDQLSARRLLARLDERSRLKNVTATEKAQSLYH LYDEKQQPTGANYTSGAKIRMFFVEGKLSRILTTGNPLGKEYPNSMRESREIDLPGFRLRDKERPVFEPHSDQKGQD >Mature_317_residues MNNTKRSIVKTAWWLMLPLAVWGTLLTDNTASAGKKKTILEHADFIEGGETSGPSGAVIPYRSAVGNVRFLHGKTILECD RATDWLENERIDLNGHIVIRDNTLETRSDTGTYDTRREIGELSGNVRGRVVEDSLTAKSVRATVDLTGDNLWLFGDAVVW QPGRQLSGDTIRVHLREIDGRKRADELEVRGHAFLATKDTLATSPLTYDQLSARRLLARLDERSRLKNVTATEKAQSLYH LYDEKQQPTGANYTSGAKIRMFFVEGKLSRILTTGNPLGKEYPNSMRESREIDLPGFRLRDKERPVFEPHSDQKGQD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 35650; Mature: 35650
Theoretical pI: Translated: 8.91; Mature: 8.91
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 1.6 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNNTKRSIVKTAWWLMLPLAVWGTLLTDNTASAGKKKTILEHADFIEGGETSGPSGAVIP CCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCEEE YRSAVGNVRFLHGKTILECDRATDWLENERIDLNGHIVIRDNTLETRSDTGTYDTRREIG EHHHCCCEEEECCCEEEEECHHHHHHCCCEEECCCEEEEECCCCCCCCCCCCCHHHHHHH ELSGNVRGRVVEDSLTAKSVRATVDLTGDNLWLFGDAVVWQPGRQLSGDTIRVHLREIDG HHCCCCCCEEECCCCCCCEEEEEEEECCCEEEEEECEEEECCCCCCCCCEEEEEEEECCC RKRADELEVRGHAFLATKDTLATSPLTYDQLSARRLLARLDERSRLKNVTATEKAQSLYH CCCCCCEEECCEEEEEECCHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHH LYDEKQQPTGANYTSGAKIRMFFVEGKLSRILTTGNPLGKEYPNSMRESREIDLPGFRLR HHHCCCCCCCCCCCCCCEEEEEEEECCCCCEEECCCCCCHHCCHHHHHCCCCCCCCCEEC DKERPVFEPHSDQKGQD CCCCCCCCCCCCCCCCC >Mature Secondary Structure MNNTKRSIVKTAWWLMLPLAVWGTLLTDNTASAGKKKTILEHADFIEGGETSGPSGAVIP CCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCEEE YRSAVGNVRFLHGKTILECDRATDWLENERIDLNGHIVIRDNTLETRSDTGTYDTRREIG EHHHCCCEEEECCCEEEEECHHHHHHCCCEEECCCEEEEECCCCCCCCCCCCCHHHHHHH ELSGNVRGRVVEDSLTAKSVRATVDLTGDNLWLFGDAVVWQPGRQLSGDTIRVHLREIDG HHCCCCCCEEECCCCCCCEEEEEEEECCCEEEEEECEEEECCCCCCCCCEEEEEEEECCC RKRADELEVRGHAFLATKDTLATSPLTYDQLSARRLLARLDERSRLKNVTATEKAQSLYH CCCCCCEEECCEEEEEECCHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHH LYDEKQQPTGANYTSGAKIRMFFVEGKLSRILTTGNPLGKEYPNSMRESREIDLPGFRLR HHHCCCCCCCCCCCCCCEEEEEEEECCCCCEEECCCCCCHHCCHHHHHCCCCCCCCCEEC DKERPVFEPHSDQKGQD CCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA