| Definition | Chlorobaculum parvum NCIB 8327 chromosome, complete genome. |
|---|---|
| Accession | NC_011027 |
| Length | 2,289,249 |
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The map label for this gene is 193213420
Identifier: 193213420
GI number: 193213420
Start: 1955037
End: 1955483
Strand: Direct
Name: 193213420
Synonym: Cpar_1781
Alternate gene names: NA
Gene position: 1955037-1955483 (Clockwise)
Preceding gene: 193213419
Following gene: 193213421
Centisome position: 85.4
GC content: 54.14
Gene sequence:
>447_bases GTGTCCTCACAAGAGCAACCCGCCCAGGAGAGCTGGGACATCACCATTGTCATCTCCGATTCCGGTCACAGAAAAACACT CATCAAAGCCGGCCACGCGGCTGAGTACCACAAAGGTGACAAAAAGGAAATTCATGTCGATGGCGGAATCAGCATTCGGA CTGTCAACCCGAACGGCTCGACGACCACCATCACGGCAGGACGCGGAATCGTGCACAATAATCAGGACATCGAAGCATTT GACGATGTCGTCATCCGTTCCGATGACGGGACGGTGCTGCGTACCGAATACATCACACGCTCCGCAAGCGACCACATGAT CCGGACAGACAAATACGTAACCATCACCAGCCCCTCCCGAACCATCCGGGGCTATGGCTTTGAAAGCGACGACGCCATGA AACGGTACAGAATTTTCCACGCCAGCGGTGAGGCCTTATCACAATAA
Upstream 100 bases:
>100_bases GTATTCTCGACGGACAACGCTATTCTTTCTGGCTATACTGTTCAGTACCGTAACCGGTTGCGGCGCTCAAGTCGACGAGC GCCGCAGTGCGGATCCGGTT
Downstream 100 bases:
>100_bases TCATCATGACCATAGTTGCATCAGTATGAAAGTACACATGCTCAAATCGAAGATCCACAATGCCATTGTTACCAGTGGAG ACCTCGAATACGAGGGCAGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 148; Mature: 147
Protein sequence:
>148_residues MSSQEQPAQESWDITIVISDSGHRKTLIKAGHAAEYHKGDKKEIHVDGGISIRTVNPNGSTTTITAGRGIVHNNQDIEAF DDVVIRSDDGTVLRTEYITRSASDHMIRTDKYVTITSPSRTIRGYGFESDDAMKRYRIFHASGEALSQ
Sequences:
>Translated_148_residues MSSQEQPAQESWDITIVISDSGHRKTLIKAGHAAEYHKGDKKEIHVDGGISIRTVNPNGSTTTITAGRGIVHNNQDIEAF DDVVIRSDDGTVLRTEYITRSASDHMIRTDKYVTITSPSRTIRGYGFESDDAMKRYRIFHASGEALSQ >Mature_147_residues SSQEQPAQESWDITIVISDSGHRKTLIKAGHAAEYHKGDKKEIHVDGGISIRTVNPNGSTTTITAGRGIVHNNQDIEAFD DVVIRSDDGTVLRTEYITRSASDHMIRTDKYVTITSPSRTIRGYGFESDDAMKRYRIFHASGEALSQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16408; Mature: 16277
Theoretical pI: Translated: 6.63; Mature: 6.63
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 1.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSSQEQPAQESWDITIVISDSGHRKTLIKAGHAAEYHKGDKKEIHVDGGISIRTVNPNGS CCCCCCCCCCCCCEEEEEECCCCEEEEEECCCCCCCCCCCCEEEEECCCEEEEEECCCCC TTTITAGRGIVHNNQDIEAFDDVVIRSDDGTVLRTEYITRSASDHMIRTDKYVTITSPSR EEEEECCCCEEECCCCCCCCCEEEEECCCCCEEEEEEEECCCCCCEEECCCEEEEECCCC TIRGYGFESDDAMKRYRIFHASGEALSQ EEEECCCCCCCCCEEEEEEECCCHHHCC >Mature Secondary Structure SSQEQPAQESWDITIVISDSGHRKTLIKAGHAAEYHKGDKKEIHVDGGISIRTVNPNGS CCCCCCCCCCCCEEEEEECCCCEEEEEECCCCCCCCCCCCEEEEECCCEEEEEECCCCC TTTITAGRGIVHNNQDIEAFDDVVIRSDDGTVLRTEYITRSASDHMIRTDKYVTITSPSR EEEEECCCCEEECCCCCCCCCEEEEECCCCCEEEEEEEECCCCCCEEECCCEEEEECCCC TIRGYGFESDDAMKRYRIFHASGEALSQ EEEECCCCCCCCCEEEEEEECCCHHHCC
PDB accession: NA
Resolution: NA
Structure class: Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA