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The map label for this gene is panD

Identifier: 193213421

GI number: 193213421

Start: 1955509

End: 1955895

Strand: Direct

Name: panD

Synonym: Cpar_1782

Alternate gene names: 193213421

Gene position: 1955509-1955895 (Clockwise)

Preceding gene: 193213420

Following gene: 193213422

Centisome position: 85.42

GC content: 52.97

Gene sequence:

>387_bases
ATGAAAGTACACATGCTCAAATCGAAGATCCACAATGCCATTGTTACCAGTGGAGACCTCGAATACGAGGGCAGCATCAC
CATCGACAAGGAGTTGCTTGAAATTGCCGATATGATGGCCAATGAGAAGGTGCTTGTGGTCAACAACAATAATGGCGAGC
GCTTCGAGACCTACATCATCGAAGGTACCCGTGGCTTGCGGGAAATCCAGTTGAACGGCGCTGCTGCGCGCTGCGCGCTG
CCGGGAGACGAAATCATCATCATGGCTTTTGCGGAGATGGAGCCCGAGGAGGCACGCAACTGGCAACCGATGATCGTGAT
CGTTGACCGGATGAACAACCCGAAACGCCGTCACCGTGTCGGCAAAGACAATGAATATCTCGGCTGA

Upstream 100 bases:

>100_bases
TATGGCTTTGAAAGCGACGACGCCATGAAACGGTACAGAATTTTCCACGCCAGCGGTGAGGCCTTATCACAATAATCATC
ATGACCATAGTTGCATCAGT

Downstream 100 bases:

>100_bases
GAATCATTTCAAATCCGGACAAATACCCCTTTTATGAGTTTGGCAATCGTCATCATGGCAGCCGGTAAAGGCACAAGAAT
GAAGTCCGACCTGCCCAAAG

Product: aspartate alpha-decarboxylase

Products: NA

Alternate protein names: Aspartate alpha-decarboxylase

Number of amino acids: Translated: 128; Mature: 128

Protein sequence:

>128_residues
MKVHMLKSKIHNAIVTSGDLEYEGSITIDKELLEIADMMANEKVLVVNNNNGERFETYIIEGTRGLREIQLNGAAARCAL
PGDEIIIMAFAEMEPEEARNWQPMIVIVDRMNNPKRRHRVGKDNEYLG

Sequences:

>Translated_128_residues
MKVHMLKSKIHNAIVTSGDLEYEGSITIDKELLEIADMMANEKVLVVNNNNGERFETYIIEGTRGLREIQLNGAAARCAL
PGDEIIIMAFAEMEPEEARNWQPMIVIVDRMNNPKRRHRVGKDNEYLG
>Mature_128_residues
MKVHMLKSKIHNAIVTSGDLEYEGSITIDKELLEIADMMANEKVLVVNNNNGERFETYIIEGTRGLREIQLNGAAARCAL
PGDEIIIMAFAEMEPEEARNWQPMIVIVDRMNNPKRRHRVGKDNEYLG

Specific function: Catalyzes the pyruvoyl-dependent decarboxylation of aspartate to produce beta-alanine

COG id: COG0853

COG function: function code H; Aspartate 1-decarboxylase

Gene ontology:

Cell location: Cytoplasm

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the panD family

Homologues:

Organism=Escherichia coli, GI1786323, Length=112, Percent_Identity=46.4285714285714, Blast_Score=105, Evalue=7e-25,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): PAND_CHLP8 (B3QQH1)

Other databases:

- EMBL:   CP001099
- RefSeq:   YP_001999374.1
- GeneID:   6420727
- GenomeReviews:   CP001099_GR
- KEGG:   cpc:Cpar_1782
- HOGENOM:   HBG302821
- OMA:   VMNEQEV
- ProtClustDB:   PRK05449
- GO:   GO:0005737
- GO:   GO:0005488
- HAMAP:   MF_00446
- InterPro:   IPR009010
- InterPro:   IPR003190
- Gene3D:   G3DSA:2.40.40.20
- PANTHER:   PTHR21012
- PIRSF:   PIRSF006246
- ProDom:   PD009294
- TIGRFAMs:   TIGR00223

Pfam domain/function: PF02261 Asp_decarbox; SSF50692 Asp_decarb_fold

EC number: =4.1.1.11

Molecular weight: Translated: 14555; Mature: 14555

Theoretical pI: Translated: 5.01; Mature: 5.01

Prosite motif: NA

Important sites: ACT_SITE 25-25 ACT_SITE 58-58 BINDING 57-57

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
6.2 %Met     (Translated Protein)
7.0 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
6.2 %Met     (Mature Protein)
7.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKVHMLKSKIHNAIVTSGDLEYEGSITIDKELLEIADMMANEKVLVVNNNNGERFETYII
CEEEHHHHHHHHHEEECCCCEECCCEEEHHHHHHHHHHHCCCEEEEEECCCCCEEEEEEE
EGTRGLREIQLNGAAARCALPGDEIIIMAFAEMEPEEARNWQPMIVIVDRMNNPKRRHRV
ECCCCEEEEEECCCEEEEECCCCCEEEEEEECCCHHHHCCCCCEEEEEECCCCCHHHHCC
GKDNEYLG
CCCCCCCC
>Mature Secondary Structure
MKVHMLKSKIHNAIVTSGDLEYEGSITIDKELLEIADMMANEKVLVVNNNNGERFETYII
CEEEHHHHHHHHHEEECCCCEECCCEEEHHHHHHHHHHHCCCEEEEEECCCCCEEEEEEE
EGTRGLREIQLNGAAARCALPGDEIIIMAFAEMEPEEARNWQPMIVIVDRMNNPKRRHRV
ECCCCEEEEEECCCEEEEECCCCCEEEEEEECCCHHHHCCCCCEEEEEECCCCCHHHHCC
GKDNEYLG
CCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA