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The map label for this gene is 193213419

Identifier: 193213419

GI number: 193213419

Start: 1954377

End: 1954916

Strand: Direct

Name: 193213419

Synonym: Cpar_1780

Alternate gene names: NA

Gene position: 1954377-1954916 (Clockwise)

Preceding gene: 193213418

Following gene: 193213420

Centisome position: 85.37

GC content: 52.41

Gene sequence:

>540_bases
ATGTCAGATTTCAAAGGAATCAAAGTCATTTCCAGACTTCTCTTTATGGCCCTTCTTCTGGGCACTTTCTTCACGAGCCG
CCCGGCTTTCGCTGCCGCAGATGGCGCGCAGAAAATCGGTGTAGTCGATTATGGAAGAATTTTCCAGATGATGCCCGAAA
CCAAAGCTGCCGAAAAGAGCATGCAGACCGCCAAAGCGCAGACCAGCCAGGAACTCGGCAAAATGCAGGCCTCTCTGCAA
ACCGCTGTTCAGACCTATCTGCAGCAGAAACAGAAAACCGGCAAATCCGATCCGGCACAGGAACGCGCACTTCAGGGACG
TGAAGAGAACCTGAGGAAAGTCGCTGCTCAAAAATCGCAGGCGCTCGCCCAGCAGGAACAAAGCCTGATTCTGCCTATCC
GCCAGAAAATCGATGCCACGGTGGCCGCAATCGCCAAAAAGGAAGGCTACAGCATGATTTTCGACAAGAACGTGCGCGTG
TATGGCGATGCCCAGTCGGACATCACCTACAAGGTGCTCGATCAGTTGAAGATCAAGTAA

Upstream 100 bases:

>100_bases
ATAGCTTTTTATCACCGGATTGCTTACTTTTGTTGGTGTTGTTCCGATGAGTTGACCAGAACAAGACTCGCTGTTTTTAT
GTAACCCAAACAACCCGACA

Downstream 100 bases:

>100_bases
CCCTCTTCTGAAAGTCCCTTGTATTCTCGACGGACAACGCTATTCTTTCTGGCTATACTGTTCAGTACCGTAACCGGTTG
CGGCGCTCAAGTCGACGAGC

Product: outer membrane chaperone Skp

Products: NA

Alternate protein names: Outer Membrane Protein OmpH; Outer Membrane Protein

Number of amino acids: Translated: 179; Mature: 178

Protein sequence:

>179_residues
MSDFKGIKVISRLLFMALLLGTFFTSRPAFAAADGAQKIGVVDYGRIFQMMPETKAAEKSMQTAKAQTSQELGKMQASLQ
TAVQTYLQQKQKTGKSDPAQERALQGREENLRKVAAQKSQALAQQEQSLILPIRQKIDATVAAIAKKEGYSMIFDKNVRV
YGDAQSDITYKVLDQLKIK

Sequences:

>Translated_179_residues
MSDFKGIKVISRLLFMALLLGTFFTSRPAFAAADGAQKIGVVDYGRIFQMMPETKAAEKSMQTAKAQTSQELGKMQASLQ
TAVQTYLQQKQKTGKSDPAQERALQGREENLRKVAAQKSQALAQQEQSLILPIRQKIDATVAAIAKKEGYSMIFDKNVRV
YGDAQSDITYKVLDQLKIK
>Mature_178_residues
SDFKGIKVISRLLFMALLLGTFFTSRPAFAAADGAQKIGVVDYGRIFQMMPETKAAEKSMQTAKAQTSQELGKMQASLQT
AVQTYLQQKQKTGKSDPAQERALQGREENLRKVAAQKSQALAQQEQSLILPIRQKIDATVAAIAKKEGYSMIFDKNVRVY
GDAQSDITYKVLDQLKIK

Specific function: Unknown

COG id: COG2825

COG function: function code M; Outer membrane protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 19852; Mature: 19721

Theoretical pI: Translated: 10.42; Mature: 10.42

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSDFKGIKVISRLLFMALLLGTFFTSRPAFAAADGAQKIGVVDYGRIFQMMPETKAAEKS
CCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCCCCCCCCHHHHHHHHHCCCHHHHHHH
MQTAKAQTSQELGKMQASLQTAVQTYLQQKQKTGKSDPAQERALQGREENLRKVAAQKSQ
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCHHHHHHHHHHHHHH
ALAQQEQSLILPIRQKIDATVAAIAKKEGYSMIFDKNVRVYGDAQSDITYKVLDQLKIK
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCEEEEECCCCCHHHHHHHHHCCC
>Mature Secondary Structure 
SDFKGIKVISRLLFMALLLGTFFTSRPAFAAADGAQKIGVVDYGRIFQMMPETKAAEKS
CCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCCCCCCCCHHHHHHHHHCCCHHHHHHH
MQTAKAQTSQELGKMQASLQTAVQTYLQQKQKTGKSDPAQERALQGREENLRKVAAQKSQ
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCHHHHHHHHHHHHHH
ALAQQEQSLILPIRQKIDATVAAIAKKEGYSMIFDKNVRVYGDAQSDITYKVLDQLKIK
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCEEEEECCCCCHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA