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The map label for this gene is smf [H]

Identifier: 193213418

GI number: 193213418

Start: 1953062

End: 1954225

Strand: Direct

Name: smf [H]

Synonym: Cpar_1779

Alternate gene names: 193213418

Gene position: 1953062-1954225 (Clockwise)

Preceding gene: 193213417

Following gene: 193213419

Centisome position: 85.31

GC content: 60.91

Gene sequence:

>1164_bases
ATGACAACCACCCCTGAATCGAACGAAACGCTCGTCCGGATCCTCATGCTCTCGAAATTGCCCGGCATCGGCCCGGCGCG
CGCACGCACCATGATTGCCACTTTCGGCTCCGGCAGCACGCTGCTGGAAGCGGACGCTGAGGCTCTCATCCAGATACCAG
GAATCGGCAAAACGCTCGCTCGCCAGACTGCCGAAAACCTCGCAAGCCCGGCGTGGCGGAACAAAGCGAAGCTGGCCGCC
GAGGAGCAGATCGAACGCGCTGGACGGCTGAATACCACCATCGTCACCATGCTTGATCCGGCCTACCCGACCCTGCTCAA
GGAAATTTACGACCCGCCGCTCGCGCTCTTCGTCCGGGGCAATGTAAAGGCGCTGGCCACACCGTCGCTTGCCGTGGTCG
GCACCCGCAAGGCGACGTCATACGGTAAACAGGCCACCGAACACCTTTGCCGCGATCTTGTCAGCATGGGGTTAACCATC
ACCAGTGGAATGGCTTACGGCATCGACATGACCGCGCATCACACCGCCGTGCAGCATGGCGGCGTAACCATCGCCGTGCT
AGGCTGCGGCGTCGATACAATCTACACCGATCCGGCAGGCCGGCTCTGGCCGCGCATCCTTGAGAGCGGCGGCGCGATTG
TGGCTGAGGACTGGCTCGGTACCGAACCCGTTCCCGGTAATTTCCCGAGAAGGAACCGCCTGATCGCCGGCATGACCCTC
GGCACGCTGGTGGTCGAATCGGATATCAAGGGCGGATCGATGATCACCGCCTCCAGCGCCCTTGAGCAGAACCGCGAAGT
GTTCGCCGTGCCGGGCAGCATCTTTGCCAAAGTTTCGCGAGGCCCGAACAGCCTGATTCAACGCTCGCAGGCCAAAGCGG
CGCTCTCTGCCGATGACATTCTCTCCGAACTGCCACCAGCAGCCTTCTTGCCAACGGCCGGCCGCCAAGATGTTGATAAG
CCTTCACTGCCCGCTCTGACCCCGGAAGAATCGCGCATTATCGAAGCTATCGAAAAGGAAGCAATCCACATCGACCTCAT
CGCCGAAAAAACCGGCATCCCCATCGAACAGCTGCTGGTGCATCTGTTCGAACTTGAAATGAACCGGATCGTCCTTCAGG
AACCGGGCCAACTGTTCAGCATCCGGCCACCCGAAAGACGCTGA

Upstream 100 bases:

>100_bases
CTGAGAGGCTTTGCCAACATCCTCATGAAGCGCGATTTCTGAATTCTGTCCGGGGGGAACCCCTCCCCCCGGCACCTCTT
CAATTCCCCTGCCCCCGACC

Downstream 100 bases:

>100_bases
ACACTGCTTTGAAAAACCAGTGAACGACCCCGCCTATTTATCTCACAGGCAATAGCTTTTTATCACCGGATTGCTTACTT
TTGTTGGTGTTGTTCCGATG

Product: DNA protecting protein DprA

Products: NA

Alternate protein names: DNA-processing chain A [H]

Number of amino acids: Translated: 387; Mature: 386

Protein sequence:

>387_residues
MTTTPESNETLVRILMLSKLPGIGPARARTMIATFGSGSTLLEADAEALIQIPGIGKTLARQTAENLASPAWRNKAKLAA
EEQIERAGRLNTTIVTMLDPAYPTLLKEIYDPPLALFVRGNVKALATPSLAVVGTRKATSYGKQATEHLCRDLVSMGLTI
TSGMAYGIDMTAHHTAVQHGGVTIAVLGCGVDTIYTDPAGRLWPRILESGGAIVAEDWLGTEPVPGNFPRRNRLIAGMTL
GTLVVESDIKGGSMITASSALEQNREVFAVPGSIFAKVSRGPNSLIQRSQAKAALSADDILSELPPAAFLPTAGRQDVDK
PSLPALTPEESRIIEAIEKEAIHIDLIAEKTGIPIEQLLVHLFELEMNRIVLQEPGQLFSIRPPERR

Sequences:

>Translated_387_residues
MTTTPESNETLVRILMLSKLPGIGPARARTMIATFGSGSTLLEADAEALIQIPGIGKTLARQTAENLASPAWRNKAKLAA
EEQIERAGRLNTTIVTMLDPAYPTLLKEIYDPPLALFVRGNVKALATPSLAVVGTRKATSYGKQATEHLCRDLVSMGLTI
TSGMAYGIDMTAHHTAVQHGGVTIAVLGCGVDTIYTDPAGRLWPRILESGGAIVAEDWLGTEPVPGNFPRRNRLIAGMTL
GTLVVESDIKGGSMITASSALEQNREVFAVPGSIFAKVSRGPNSLIQRSQAKAALSADDILSELPPAAFLPTAGRQDVDK
PSLPALTPEESRIIEAIEKEAIHIDLIAEKTGIPIEQLLVHLFELEMNRIVLQEPGQLFSIRPPERR
>Mature_386_residues
TTTPESNETLVRILMLSKLPGIGPARARTMIATFGSGSTLLEADAEALIQIPGIGKTLARQTAENLASPAWRNKAKLAAE
EQIERAGRLNTTIVTMLDPAYPTLLKEIYDPPLALFVRGNVKALATPSLAVVGTRKATSYGKQATEHLCRDLVSMGLTIT
SGMAYGIDMTAHHTAVQHGGVTIAVLGCGVDTIYTDPAGRLWPRILESGGAIVAEDWLGTEPVPGNFPRRNRLIAGMTLG
TLVVESDIKGGSMITASSALEQNREVFAVPGSIFAKVSRGPNSLIQRSQAKAALSADDILSELPPAAFLPTAGRQDVDKP
SLPALTPEESRIIEAIEKEAIHIDLIAEKTGIPIEQLLVHLFELEMNRIVLQEPGQLFSIRPPERR

Specific function: Essential for efficient chromosomal DNA transformation but not required for plasmid transformation [H]

COG id: COG0758

COG function: function code LU; Predicted Rossmann fold nucleotide-binding protein involved in DNA uptake

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the smf family [H]

Homologues:

Organism=Escherichia coli, GI48994932, Length=375, Percent_Identity=36, Blast_Score=187, Evalue=8e-49,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003488 [H]

Pfam domain/function: PF02481 DNA_processg_A [H]

EC number: NA

Molecular weight: Translated: 41470; Mature: 41339

Theoretical pI: Translated: 6.27; Mature: 6.27

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTTTPESNETLVRILMLSKLPGIGPARARTMIATFGSGSTLLEADAEALIQIPGIGKTLA
CCCCCCCCHHHHHHHHHHHCCCCCCHHHHEEEEECCCCCEEEECCCCEEEECCCCCHHHH
RQTAENLASPAWRNKAKLAAEEQIERAGRLNTTIVTMLDPAYPTLLKEIYDPPLALFVRG
HHHHHHHCCCHHCCHHHHHHHHHHHHHCCCCEEEEEEECCCHHHHHHHHCCCCEEEEEEC
NVKALATPSLAVVGTRKATSYGKQATEHLCRDLVSMGLTITSGMAYGIDMTAHHTAVQHG
CEEEEECCCEEEEECCHHHHHHHHHHHHHHHHHHHCCCEEECCCEECCCCHHHHHHHHCC
GVTIAVLGCGVDTIYTDPAGRLWPRILESGGAIVAEDWLGTEPVPGNFPRRNRLIAGMTL
CEEEEEEECCCCEEEECCCHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCCEEEEEEE
GTLVVESDIKGGSMITASSALEQNREVFAVPGSIFAKVSRGPNSLIQRSQAKAALSADDI
EEEEEECCCCCCCEEEEHHHHHCCCEEEEECHHHHHHHCCCHHHHHHHHHHHHHCCHHHH
LSELPPAAFLPTAGRQDVDKPSLPALTPEESRIIEAIEKEAIHIDLIAEKTGIPIEQLLV
HHHCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCEEEEEEECCCCCCHHHHHH
HLFELEMNRIVLQEPGQLFSIRPPERR
HHHHHHHCEEEEECCCCEEECCCCCCC
>Mature Secondary Structure 
TTTPESNETLVRILMLSKLPGIGPARARTMIATFGSGSTLLEADAEALIQIPGIGKTLA
CCCCCCCHHHHHHHHHHHCCCCCCHHHHEEEEECCCCCEEEECCCCEEEECCCCCHHHH
RQTAENLASPAWRNKAKLAAEEQIERAGRLNTTIVTMLDPAYPTLLKEIYDPPLALFVRG
HHHHHHHCCCHHCCHHHHHHHHHHHHHCCCCEEEEEEECCCHHHHHHHHCCCCEEEEEEC
NVKALATPSLAVVGTRKATSYGKQATEHLCRDLVSMGLTITSGMAYGIDMTAHHTAVQHG
CEEEEECCCEEEEECCHHHHHHHHHHHHHHHHHHHCCCEEECCCEECCCCHHHHHHHHCC
GVTIAVLGCGVDTIYTDPAGRLWPRILESGGAIVAEDWLGTEPVPGNFPRRNRLIAGMTL
CEEEEEEECCCCEEEECCCHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCCEEEEEEE
GTLVVESDIKGGSMITASSALEQNREVFAVPGSIFAKVSRGPNSLIQRSQAKAALSADDI
EEEEEECCCCCCCEEEEHHHHHCCCEEEEECHHHHHHHCCCHHHHHHHHHHHHHCCHHHH
LSELPPAAFLPTAGRQDVDKPSLPALTPEESRIIEAIEKEAIHIDLIAEKTGIPIEQLLV
HHHCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCEEEEEEECCCCCCHHHHHH
HLFELEMNRIVLQEPGQLFSIRPPERR
HHHHHHHCEEEEECCCCEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 7768823; 7542800 [H]