Click here to switch to the map view.

The map label for this gene is 193213309

Identifier: 193213309

GI number: 193213309

Start: 1818609

End: 1819046

Strand: Direct

Name: 193213309

Synonym: Cpar_1667

Alternate gene names: NA

Gene position: 1818609-1819046 (Clockwise)

Preceding gene: 193213308

Following gene: 193213310

Centisome position: 79.44

GC content: 54.79

Gene sequence:

>438_bases
ATGAGCGAATCCGGAAAATCGAAAGGATGGCTGGTCATCTCTTTCGGTATCCTTGTTTTGACCATCGTGTATGTGGTCTT
TCAACCCCCGCAAAATACAGAGGTTCTGCCCCGGAAAATCGATCCGGAGGTGATGGGAGCTCTCGAACAGAGTACAGCAA
CGGAGACCACAGCCGGTCCGGGGCGGTACATCGACAATCCCGACGCCATCGCCGCAGGCAAGGCTGAATATGAAACCCAC
TGCGCCGCCTGCCACCTGAGCGACGCCAGAGGAGCCATCGGCCCGAACCTCAGAAAACGCCTCAAATTCGGCTCGACCCC
TGAAAAAATCTACAAGTCGATCGAGAAAGGCCGACCAGCCGGTATGCCCGCATTTGGCAAACAGCTCAGCAACGACAAAA
TCAGCAAGATCATCGCCTACATTGAAAGTCTGCGGTGA

Upstream 100 bases:

>100_bases
CGCCGGTGTTTTCTTCACAAAACTGCTCGAATAGCACATCGCTGCGACTCGAAAAAAGTCTATGGACTCACCGGGGCAAC
AGCAACAACAGGAGAAAAGC

Downstream 100 bases:

>100_bases
ACTGCTGCATCCATCGTTCTGGAAAAATAAGCCCCAAAACGATGGATATTTGCGAACTAACCGTTCGGTTGATTCATCGA
TAAACTGAGCATCTCTGGCA

Product: cytochrome c class I

Products: NA

Alternate protein names: Cb-Type Cytochrome C Oxidase Subunit III; Cytochrome C; Cytochrome C Oxidase Cbb3-Type Subunit III

Number of amino acids: Translated: 145; Mature: 144

Protein sequence:

>145_residues
MSESGKSKGWLVISFGILVLTIVYVVFQPPQNTEVLPRKIDPEVMGALEQSTATETTAGPGRYIDNPDAIAAGKAEYETH
CAACHLSDARGAIGPNLRKRLKFGSTPEKIYKSIEKGRPAGMPAFGKQLSNDKISKIIAYIESLR

Sequences:

>Translated_145_residues
MSESGKSKGWLVISFGILVLTIVYVVFQPPQNTEVLPRKIDPEVMGALEQSTATETTAGPGRYIDNPDAIAAGKAEYETH
CAACHLSDARGAIGPNLRKRLKFGSTPEKIYKSIEKGRPAGMPAFGKQLSNDKISKIIAYIESLR
>Mature_144_residues
SESGKSKGWLVISFGILVLTIVYVVFQPPQNTEVLPRKIDPEVMGALEQSTATETTAGPGRYIDNPDAIAAGKAEYETHC
AACHLSDARGAIGPNLRKRLKFGSTPEKIYKSIEKGRPAGMPAFGKQLSNDKISKIIAYIESLR

Specific function: Unknown

COG id: COG2010

COG function: function code C; Cytochrome c, mono- and diheme variants

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 15721; Mature: 15590

Theoretical pI: Translated: 9.42; Mature: 9.42

Prosite motif: PS51007 CYTC

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSESGKSKGWLVISFGILVLTIVYVVFQPPQNTEVLPRKIDPEVMGALEQSTATETTAGP
CCCCCCCCCEEEEHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCC
GRYIDNPDAIAAGKAEYETHCAACHLSDARGAIGPNLRKRLKFGSTPEKIYKSIEKGRPA
CCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCHHHHHHHCCCCCHHHHHHHHHCCCCC
GMPAFGKQLSNDKISKIIAYIESLR
CCCHHHHHCCHHHHHHHHHHHHHCC
>Mature Secondary Structure 
SESGKSKGWLVISFGILVLTIVYVVFQPPQNTEVLPRKIDPEVMGALEQSTATETTAGP
CCCCCCCCEEEEHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCC
GRYIDNPDAIAAGKAEYETHCAACHLSDARGAIGPNLRKRLKFGSTPEKIYKSIEKGRPA
CCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCHHHHHHHCCCCCHHHHHHHHHCCCCC
GMPAFGKQLSNDKISKIIAYIESLR
CCCHHHHHCCHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA