| Definition | Chlorobaculum parvum NCIB 8327 chromosome, complete genome. |
|---|---|
| Accession | NC_011027 |
| Length | 2,289,249 |
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The map label for this gene is 193213308
Identifier: 193213308
GI number: 193213308
Start: 1817722
End: 1818402
Strand: Direct
Name: 193213308
Synonym: Cpar_1666
Alternate gene names: NA
Gene position: 1817722-1818402 (Clockwise)
Preceding gene: 193213307
Following gene: 193213309
Centisome position: 79.4
GC content: 64.02
Gene sequence:
>681_bases ATGAAAAGTGAACTGCTTGCAATGCTGCTGGCCGGACTGGCGGGCGGCTTCGGCCACTGCATCGGCATGTGCGGGCCGCT GGTTGCGGCGCTCTCGCTCGGCCAGCACAAGCCCGGCCTCGGGCACCATCTGCTCTACAACCTCGGACGGGTGACGACCT ACACCATCCTCGGTGCGGTGGTCGGCGTAACCGGATCGTTCCTGTCGCTCGCCTCCTCGATCGACCCGATCCAGACTGCG GTCATGGCGCTCTCAGGCCTCTTCATCGTGCTGATGGGTCTGGCCTCTGCTGGCTGGCTGCCCTTTGGTCAGCGCCTGAT GAGCTGCAACCCCTCCACACCGTTCATCAGGAAGACAGTGGAACTGTTCAGAAGCCCGGCCTCAGCAGGCGCCTGGTTTC CACTCGGCATCGTGCTCGGCTTCCTGCCCTGCGGCCTCACCTACACCGCCCTGCTCGCCGCTGCCCGAGCCGCGATGGAC GCTCCCGACCACTTTGCAGGTATGGTGCTGGGCGCGCTCATGATGCTGCTTTTCGGCATCGGCACTGCCCCGGCGCTGCT ACTCGTCGGCAAAACTGCAACCCTGATCGGCGAAAAGACCCGCCAGCGCCTCTACCGCCTGGCAGGCATCATCATGATCC TCACCGGCATCTGGTTCATCTACGGCGCATTTCGAGGTTAG
Upstream 100 bases:
>100_bases CAAGCCCGATAATGATGCATATTTGTTATGGAATGGAATAAAAAAGGCAAGTGCAAGAACGATTTCGATCAATACAATGG AGGAATAAACCATCGCAACC
Downstream 100 bases:
>100_bases CGTCTCTCATCCAGATCCAGATTAAAATCGCTATCGAGATCGGATTTGAAAATCAAGCGCTGACGCTCCGAGAATTCAAA GACACAAACATGAACGACGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 226; Mature: 226
Protein sequence:
>226_residues MKSELLAMLLAGLAGGFGHCIGMCGPLVAALSLGQHKPGLGHHLLYNLGRVTTYTILGAVVGVTGSFLSLASSIDPIQTA VMALSGLFIVLMGLASAGWLPFGQRLMSCNPSTPFIRKTVELFRSPASAGAWFPLGIVLGFLPCGLTYTALLAAARAAMD APDHFAGMVLGALMMLLFGIGTAPALLLVGKTATLIGEKTRQRLYRLAGIIMILTGIWFIYGAFRG
Sequences:
>Translated_226_residues MKSELLAMLLAGLAGGFGHCIGMCGPLVAALSLGQHKPGLGHHLLYNLGRVTTYTILGAVVGVTGSFLSLASSIDPIQTA VMALSGLFIVLMGLASAGWLPFGQRLMSCNPSTPFIRKTVELFRSPASAGAWFPLGIVLGFLPCGLTYTALLAAARAAMD APDHFAGMVLGALMMLLFGIGTAPALLLVGKTATLIGEKTRQRLYRLAGIIMILTGIWFIYGAFRG >Mature_226_residues MKSELLAMLLAGLAGGFGHCIGMCGPLVAALSLGQHKPGLGHHLLYNLGRVTTYTILGAVVGVTGSFLSLASSIDPIQTA VMALSGLFIVLMGLASAGWLPFGQRLMSCNPSTPFIRKTVELFRSPASAGAWFPLGIVLGFLPCGLTYTALLAAARAAMD APDHFAGMVLGALMMLLFGIGTAPALLLVGKTATLIGEKTRQRLYRLAGIIMILTGIWFIYGAFRG
Specific function: Unknown
COG id: COG2836
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23596; Mature: 23596
Theoretical pI: Translated: 10.05; Mature: 10.05
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 4.9 %Met (Translated Protein) 6.6 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 4.9 %Met (Mature Protein) 6.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKSELLAMLLAGLAGGFGHCIGMCGPLVAALSLGQHKPGLGHHLLYNLGRVTTYTILGAV CHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHH VGVTGSFLSLASSIDPIQTAVMALSGLFIVLMGLASAGWLPFGQRLMSCNPSTPFIRKTV HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCHHHHHHH ELFRSPASAGAWFPLGIVLGFLPCGLTYTALLAAARAAMDAPDHFAGMVLGALMMLLFGI HHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHC GTAPALLLVGKTATLIGEKTRQRLYRLAGIIMILTGIWFIYGAFRG CHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MKSELLAMLLAGLAGGFGHCIGMCGPLVAALSLGQHKPGLGHHLLYNLGRVTTYTILGAV CHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHH VGVTGSFLSLASSIDPIQTAVMALSGLFIVLMGLASAGWLPFGQRLMSCNPSTPFIRKTV HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCHHHHHHH ELFRSPASAGAWFPLGIVLGFLPCGLTYTALLAAARAAMDAPDHFAGMVLGALMMLLFGI HHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHC GTAPALLLVGKTATLIGEKTRQRLYRLAGIIMILTGIWFIYGAFRG CHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA