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The map label for this gene is yhfI [H]

Identifier: 193213095

GI number: 193213095

Start: 1586346

End: 1587092

Strand: Direct

Name: yhfI [H]

Synonym: Cpar_1450

Alternate gene names: 193213095

Gene position: 1586346-1587092 (Clockwise)

Preceding gene: 193213094

Following gene: 193213096

Centisome position: 69.3

GC content: 55.15

Gene sequence:

>747_bases
ATGAAGGTGGTGTTTCTCGGCACGAACGGATGGTATGACTCATCCACAGGCAAGACGATCTGTACTCTTGTCGAAACCAG
CGCATCGGTGATCGTGCTCGATGCCGGTAACGGCTTGCAGAACGCTGACCGGTTCATGTGTGCCGACAAACCGGTTCACC
TGTTTCTGAGTCATCTGCATCTCGATCATATTATCGGCCTGCACCTGCTCAACAAGTTCAGTATTCCAAAAGGACTGACC
ATTCATTGCCGTAAGGGCGATCTCCAACATCTCAAAACCATCATCGCCCCGCCCTACTCCCTGCCTTTTTCCGCCCTTTC
GTATCCGGTTACGCTCAGGGAGCATGACGGAACAGCCATCGAACTCGACGGCTTTACGGTTCAGTCGGCTCCAATGCGCC
ACTCGGTACCCACGATCGGCTTTCGCTTAGGCATCGAAGGCAAAACCGTGGCCTATTGCCCCGACACCGGCTACTGCCAA
AGCGCGGTCGAGCTGGCCAGCAATGCCGATCTGTTGATAGCCGAATGTGCTTTTCGAAGTGGCGAAGAGAATCAGGACTG
GCCGCATCTCAATCCCGAAAGCGCAGCCAGGCTCGCCCTCGAGGCAGGAGCCAAACAGCTCGCGCTGGTGCATTTCGATG
CGTTCAGGTATCCCGACAGGAAAAGCCGGATGGAGGCGGAACAGGCCGCGCGCAAGATTTTTGTGAACGTTCTGGCAGCC
GAAGACGATCAGATTATTGCGTTATAA

Upstream 100 bases:

>100_bases
CGGTGAACTGGTACCAGCAGTACCAAAGTGGCCGGATATTAGAGATTTGCCAGGCGCAGATCGAGGCTTACATGAATAGT
TGACAAGCGGAGAAATGCGT

Downstream 100 bases:

>100_bases
CCACAAGCAGAAACAGGAGCCCGGATAATTGATGACAAACAAGGCAGAAGCTCTGAAGCAGGAGATCCTGAACAAAACCA
GAGAGTACTACGAACTGGTG

Product: seceted metal-dependent hydrolase of the beta-lactamase superfamily III

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 248; Mature: 248

Protein sequence:

>248_residues
MKVVFLGTNGWYDSSTGKTICTLVETSASVIVLDAGNGLQNADRFMCADKPVHLFLSHLHLDHIIGLHLLNKFSIPKGLT
IHCRKGDLQHLKTIIAPPYSLPFSALSYPVTLREHDGTAIELDGFTVQSAPMRHSVPTIGFRLGIEGKTVAYCPDTGYCQ
SAVELASNADLLIAECAFRSGEENQDWPHLNPESAARLALEAGAKQLALVHFDAFRYPDRKSRMEAEQAARKIFVNVLAA
EDDQIIAL

Sequences:

>Translated_248_residues
MKVVFLGTNGWYDSSTGKTICTLVETSASVIVLDAGNGLQNADRFMCADKPVHLFLSHLHLDHIIGLHLLNKFSIPKGLT
IHCRKGDLQHLKTIIAPPYSLPFSALSYPVTLREHDGTAIELDGFTVQSAPMRHSVPTIGFRLGIEGKTVAYCPDTGYCQ
SAVELASNADLLIAECAFRSGEENQDWPHLNPESAARLALEAGAKQLALVHFDAFRYPDRKSRMEAEQAARKIFVNVLAA
EDDQIIAL
>Mature_248_residues
MKVVFLGTNGWYDSSTGKTICTLVETSASVIVLDAGNGLQNADRFMCADKPVHLFLSHLHLDHIIGLHLLNKFSIPKGLT
IHCRKGDLQHLKTIIAPPYSLPFSALSYPVTLREHDGTAIELDGFTVQSAPMRHSVPTIGFRLGIEGKTVAYCPDTGYCQ
SAVELASNADLLIAECAFRSGEENQDWPHLNPESAARLALEAGAKQLALVHFDAFRYPDRKSRMEAEQAARKIFVNVLAA
EDDQIIAL

Specific function: Zinc Phosphodiesterase, Which Displays Some Trna 3'- Processing Endonuclease Activity. Probably Involved In Trna Maturation, By Removing A 3'Trailer From Precursor Trna. [C]

COG id: COG1234

COG function: function code R; Metal-dependent hydrolases of the beta-lactamase superfamily III

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001279 [H]

Pfam domain/function: PF00753 Lactamase_B [H]

EC number: 3.1.26.11 [C]

Molecular weight: Translated: 27183; Mature: 27183

Theoretical pI: Translated: 6.43; Mature: 6.43

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.4 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
2.4 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKVVFLGTNGWYDSSTGKTICTLVETSASVIVLDAGNGLQNADRFMCADKPVHLFLSHLH
CEEEEEECCCCCCCCCCCEEEEEEECCCCEEEEECCCCCCCCCCEEECCCCHHHHHHHHH
LDHIIGLHLLNKFSIPKGLTIHCRKGDLQHLKTIIAPPYSLPFSALSYPVTLREHDGTAI
HHHHHHHHHHHHCCCCCCCEEEECCCCHHHHHHHHCCCCCCCHHHHCCCEEEEECCCCEE
ELDGFTVQSAPMRHSVPTIGFRLGIEGKTVAYCPDTGYCQSAVELASNADLLIAECAFRS
EECCEEEECCCCCCCCCCEEEEEECCCCEEEECCCCCHHHHHHHHHCCCCEEEEEEHHCC
GEENQDWPHLNPESAARLALEAGAKQLALVHFDAFRYPDRKSRMEAEQAARKIFVNVLAA
CCCCCCCCCCCHHHHHHHHHHCCCCEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHEEEC
EDDQIIAL
CCCEEEEC
>Mature Secondary Structure
MKVVFLGTNGWYDSSTGKTICTLVETSASVIVLDAGNGLQNADRFMCADKPVHLFLSHLH
CEEEEEECCCCCCCCCCCEEEEEEECCCCEEEEECCCCCCCCCCEEECCCCHHHHHHHHH
LDHIIGLHLLNKFSIPKGLTIHCRKGDLQHLKTIIAPPYSLPFSALSYPVTLREHDGTAI
HHHHHHHHHHHHCCCCCCCEEEECCCCHHHHHHHHCCCCCCCHHHHCCCEEEEECCCCEE
ELDGFTVQSAPMRHSVPTIGFRLGIEGKTVAYCPDTGYCQSAVELASNADLLIAECAFRS
EECCEEEECCCCCCCCCCEEEEEECCCCEEEECCCCCHHHHHHHHHCCCCEEEEEEHHCC
GEENQDWPHLNPESAARLALEAGAKQLALVHFDAFRYPDRKSRMEAEQAARKIFVNVLAA
CCCCCCCCCCCHHHHHHHHHHCCCCEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHEEEC
EDDQIIAL
CCCEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9579061; 9384377 [H]