Definition | Chlorobaculum parvum NCIB 8327 chromosome, complete genome. |
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Accession | NC_011027 |
Length | 2,289,249 |
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The map label for this gene is 193213007
Identifier: 193213007
GI number: 193213007
Start: 1472805
End: 1474922
Strand: Direct
Name: 193213007
Synonym: Cpar_1358
Alternate gene names: NA
Gene position: 1472805-1474922 (Clockwise)
Preceding gene: 193213006
Following gene: 193213014
Centisome position: 64.34
GC content: 51.13
Gene sequence:
>2118_bases ATGGGCGAGCAGAAAACCAATGTCACGGCCCCTCCGGTTGTAGAGCGTTTCGGTGAAGCTCGCCACAGAGAACCCGTCTC TCCAGATTCAAAAAAACAGTGGTTTCAACGCAGCTCATCCTCCGAAACCCCGACCTATAATTTTATCATACCGGCCAATC TCTCGGAACAAACCGTTCGCAATGACGGAATCGGTCACGGCTGGGCAGAATTCGAGGGGATTTCCGTATCGCAGGATTCC AACCCGCAGGAATTCAACGGAGCGATTTCCACTGACCCCAACGGCAAGAACTTCAGATTCGTCGATATAGCCTGGCAATT CATTCTCAGGAGCGATATTGAAACCTTCGGTTCCTCAACCGAAGAGTGGGCCTCGGCCCTGCTCGAAAAGCTTGAGCTTC GGAAGAAGAATGGCAAGCCGATGGCTTCCTGGGCGCTGCCAATGCTCAAGTCCATCGTCAATACGGCCATCCCCGTTAAA GAGATGCTGGCATTCAAATATGCCGCCTTGACGAAACTGGTTTTTGACGGCTTCCTGGGCGACGTGCATCTTTATGGCGA TTACGGCAGAACCCGAGGACGCGCGGTCAGGCATTTCCATGTCGTGCTGGATGAAATCATGATCAGGGATTTTCTGCAAT GGTACTGGCAAATCTATTACCAGAGCAAAGAGCAGAACGCTAAAAAACCGGCATACGAACCACCGGAATTCACCATCATC GCGCACAGTCTCGGCAGCATCATGAGTTTCGACTCGCTGGTCTACGCGCACATCAGGGACGACATCCGGCGAAACGACTA CACCAGCGAAGAGTGGCCCGAGAGCCTGCCGTTTCCAGGCTACGATTTCATTCATGACATCGAAAAAAAGAACTGGAACT ACCTGCACGGCAAACTCCAGAGCATATGGAAAGCCGAGCAAGGCAACCCGGCTATTCTCGACGTTATCAGGCACATCATT CCAAATGCAGACGAGCTGTTTAACGCCGATACCGCGCATGCAAACGGTGACCAACAAGAGCACAAGAGCATTGCCGCACC TGAAATCCCCTACGTATCATGGAAAAATCATGTAACCAATTTCATCACCATCGGCTCTCCTATCGATAAATTTCTTGCAC TCTGGCCTGATAATTATCTGCACCTCTACGACACTGGAACAGTCACCACGTCCGCCCCGGAAAAGATGTATCATTACAAC TTCTGCGACGAACAGGATCCGGTTGGCCATCATCTGGAAGAGGCGATGAAAACTCCGGTGTATCAAACGCTGTTCAACAC CGACCCGATAGGCAATCACGATGTCGTTTTCAGGCGTTACGGCATTCCCGGCGTTGCGCACAACCTGTACTGGACGGATC AGGAGCTTTTCTTCGGCATCATTGACAAAATTATCGACACCAAAACCGCCAACACCAGCGACGACTTTGTCTGGAAGGAG ATTCACGAAAAAACAAGAGCGTTCAAATCAGCGAAACGGTGGGCCTATTACCTGATTCCGTTAATCACCACACTGGCAAC AACGGCGCTGGTCAGTTATGGCATCCTGAACGACTCGCTCTTATGGCGCTGGCTGTCCATCATTGCCGCTGTTCTGCTCT GGGTGCAGCCGAACCTGCTGACGGCATACAAGGATGAAACCGCCGACAGCCGCAAAATGGCCCCGTCATGGCTCGAAGAT AAATGGAATAAAATCCGGCCGGTCAGGGGTATTTTCAGCCGTCTGGTCAGCGCGGCGATTGAGTGGAGAAGAATCCTGAT CGTCGAAAGCCTCGGCTCAAATACCGTACCAGTTGATAATCAACCCTATGATGTCAGCGAACGCATAGCTTTCCAGAGCC AGGAGATGACCGACAAGCCCTTGAAGTATTTTGCTTTACTGGTCACCGTCGCAACCTTATCCCTCGCCGGAAGCCTTGCG CTGGGTTATACGCTTTATTATCCGGTTGAGGCTGACGCATTATTACACATCAACGTATTCACTCATCTATCCACTATTTC GGGACCATGGTTGAACGCAGGAAAAATCGCATTCTTCTTCACGCTAAGCTATAGCCTTGTGCGCTTTTACGTTGCGGGTT CATTCCTTGGAGCCTGGAAAAGATGCAGACCGGAATAG
Upstream 100 bases:
>100_bases CTTTATCTATTCACCGAAAGAAAAGGAGAGAGCCGTGGATAACCAGCACCAGAATTCGGCGAGCCCTCAAAAACGGCAAT ATATCGTCGTTGTGCATGGC
Downstream 100 bases:
>100_bases CGCCTATCAGCTTAGGCTCACGGCTATTTCATCGACATCATGAGCAATGACCAGCGGAATACCAAAAAGCTCAACGCCGC TGGATGAGGTTTTAAGCTGG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 705; Mature: 704
Protein sequence:
>705_residues MGEQKTNVTAPPVVERFGEARHREPVSPDSKKQWFQRSSSSETPTYNFIIPANLSEQTVRNDGIGHGWAEFEGISVSQDS NPQEFNGAISTDPNGKNFRFVDIAWQFILRSDIETFGSSTEEWASALLEKLELRKKNGKPMASWALPMLKSIVNTAIPVK EMLAFKYAALTKLVFDGFLGDVHLYGDYGRTRGRAVRHFHVVLDEIMIRDFLQWYWQIYYQSKEQNAKKPAYEPPEFTII AHSLGSIMSFDSLVYAHIRDDIRRNDYTSEEWPESLPFPGYDFIHDIEKKNWNYLHGKLQSIWKAEQGNPAILDVIRHII PNADELFNADTAHANGDQQEHKSIAAPEIPYVSWKNHVTNFITIGSPIDKFLALWPDNYLHLYDTGTVTTSAPEKMYHYN FCDEQDPVGHHLEEAMKTPVYQTLFNTDPIGNHDVVFRRYGIPGVAHNLYWTDQELFFGIIDKIIDTKTANTSDDFVWKE IHEKTRAFKSAKRWAYYLIPLITTLATTALVSYGILNDSLLWRWLSIIAAVLLWVQPNLLTAYKDETADSRKMAPSWLED KWNKIRPVRGIFSRLVSAAIEWRRILIVESLGSNTVPVDNQPYDVSERIAFQSQEMTDKPLKYFALLVTVATLSLAGSLA LGYTLYYPVEADALLHINVFTHLSTISGPWLNAGKIAFFFTLSYSLVRFYVAGSFLGAWKRCRPE
Sequences:
>Translated_705_residues MGEQKTNVTAPPVVERFGEARHREPVSPDSKKQWFQRSSSSETPTYNFIIPANLSEQTVRNDGIGHGWAEFEGISVSQDS NPQEFNGAISTDPNGKNFRFVDIAWQFILRSDIETFGSSTEEWASALLEKLELRKKNGKPMASWALPMLKSIVNTAIPVK EMLAFKYAALTKLVFDGFLGDVHLYGDYGRTRGRAVRHFHVVLDEIMIRDFLQWYWQIYYQSKEQNAKKPAYEPPEFTII AHSLGSIMSFDSLVYAHIRDDIRRNDYTSEEWPESLPFPGYDFIHDIEKKNWNYLHGKLQSIWKAEQGNPAILDVIRHII PNADELFNADTAHANGDQQEHKSIAAPEIPYVSWKNHVTNFITIGSPIDKFLALWPDNYLHLYDTGTVTTSAPEKMYHYN FCDEQDPVGHHLEEAMKTPVYQTLFNTDPIGNHDVVFRRYGIPGVAHNLYWTDQELFFGIIDKIIDTKTANTSDDFVWKE IHEKTRAFKSAKRWAYYLIPLITTLATTALVSYGILNDSLLWRWLSIIAAVLLWVQPNLLTAYKDETADSRKMAPSWLED KWNKIRPVRGIFSRLVSAAIEWRRILIVESLGSNTVPVDNQPYDVSERIAFQSQEMTDKPLKYFALLVTVATLSLAGSLA LGYTLYYPVEADALLHINVFTHLSTISGPWLNAGKIAFFFTLSYSLVRFYVAGSFLGAWKRCRPE >Mature_704_residues GEQKTNVTAPPVVERFGEARHREPVSPDSKKQWFQRSSSSETPTYNFIIPANLSEQTVRNDGIGHGWAEFEGISVSQDSN PQEFNGAISTDPNGKNFRFVDIAWQFILRSDIETFGSSTEEWASALLEKLELRKKNGKPMASWALPMLKSIVNTAIPVKE MLAFKYAALTKLVFDGFLGDVHLYGDYGRTRGRAVRHFHVVLDEIMIRDFLQWYWQIYYQSKEQNAKKPAYEPPEFTIIA HSLGSIMSFDSLVYAHIRDDIRRNDYTSEEWPESLPFPGYDFIHDIEKKNWNYLHGKLQSIWKAEQGNPAILDVIRHIIP NADELFNADTAHANGDQQEHKSIAAPEIPYVSWKNHVTNFITIGSPIDKFLALWPDNYLHLYDTGTVTTSAPEKMYHYNF CDEQDPVGHHLEEAMKTPVYQTLFNTDPIGNHDVVFRRYGIPGVAHNLYWTDQELFFGIIDKIIDTKTANTSDDFVWKEI HEKTRAFKSAKRWAYYLIPLITTLATTALVSYGILNDSLLWRWLSIIAAVLLWVQPNLLTAYKDETADSRKMAPSWLEDK WNKIRPVRGIFSRLVSAAIEWRRILIVESLGSNTVPVDNQPYDVSERIAFQSQEMTDKPLKYFALLVTVATLSLAGSLAL GYTLYYPVEADALLHINVFTHLSTISGPWLNAGKIAFFFTLSYSLVRFYVAGSFLGAWKRCRPE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 80741; Mature: 80610
Theoretical pI: Translated: 6.37; Mature: 6.37
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGEQKTNVTAPPVVERFGEARHREPVSPDSKKQWFQRSSSSETPTYNFIIPANLSEQTVR CCCCCCCCCCCHHHHHHHHHHCCCCCCCCHHHHHHHHCCCCCCCEEEEEEECCCCHHHHH NDGIGHGWAEFEGISVSQDSNPQEFNGAISTDPNGKNFRFVDIAWQFILRSDIETFGSST CCCCCCCHHHCCCCCCCCCCCHHHCCCCCCCCCCCCCEEEHHHHHHHHHHHHHHHHCCCH EEWASALLEKLELRKKNGKPMASWALPMLKSIVNTAIPVKEMLAFKYAALTKLVFDGFLG HHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCC DVHLYGDYGRTRGRAVRHFHVVLDEIMIRDFLQWYWQIYYQSKEQNAKKPAYEPPEFTII CEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEE AHSLGSIMSFDSLVYAHIRDDIRRNDYTSEEWPESLPFPGYDFIHDIEKKNWNYLHGKLQ HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHCCCHHHHHHHH SIWKAEQGNPAILDVIRHIIPNADELFNADTAHANGDQQEHKSIAAPEIPYVSWKNHVTN HHHHCCCCCHHHHHHHHHHCCCHHHHCCCCCCCCCCCHHHHHCCCCCCCCCCCHHHCCCE FITIGSPIDKFLALWPDNYLHLYDTGTVTTSAPEKMYHYNFCDEQDPVGHHLEEAMKTPV EEECCCCHHHHHHHCCCCEEEEEECCEEECCCCHHHHCCCCCCCCCCCHHHHHHHHHCCH YQTLFNTDPIGNHDVVFRRYGIPGVAHNLYWTDQELFFGIIDKIIDTKTANTSDDFVWKE HHHHHCCCCCCCCCEEEEECCCCCHHCCCEECHHHHHHHHHHHHHCCCCCCCCCHHHHHH IHEKTRAFKSAKRWAYYLIPLITTLATTALVSYGILNDSLLWRWLSIIAAVLLWVQPNLL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCHH TAYKDETADSRKMAPSWLEDKWNKIRPVRGIFSRLVSAAIEWRRILIVESLGSNTVPVDN HHCCCCCCCHHHCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHEEEEEECCCCCCCCCC QPYDVSERIAFQSQEMTDKPLKYFALLVTVATLSLAGSLALGYTLYYPVEADALLHINVF CCCCHHHHHHHCCHHCCCHHHHHHHHHHHHHHHHHHHHHHHCEEEEEECCCCCEEEEEHH THLSTISGPWLNAGKIAFFFTLSYSLVRFYVAGSFLGAWKRCRPE HHHHHCCCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure GEQKTNVTAPPVVERFGEARHREPVSPDSKKQWFQRSSSSETPTYNFIIPANLSEQTVR CCCCCCCCCCHHHHHHHHHHCCCCCCCCHHHHHHHHCCCCCCCEEEEEEECCCCHHHHH NDGIGHGWAEFEGISVSQDSNPQEFNGAISTDPNGKNFRFVDIAWQFILRSDIETFGSST CCCCCCCHHHCCCCCCCCCCCHHHCCCCCCCCCCCCCEEEHHHHHHHHHHHHHHHHCCCH EEWASALLEKLELRKKNGKPMASWALPMLKSIVNTAIPVKEMLAFKYAALTKLVFDGFLG HHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCC DVHLYGDYGRTRGRAVRHFHVVLDEIMIRDFLQWYWQIYYQSKEQNAKKPAYEPPEFTII CEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEE AHSLGSIMSFDSLVYAHIRDDIRRNDYTSEEWPESLPFPGYDFIHDIEKKNWNYLHGKLQ HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHCCCHHHHHHHH SIWKAEQGNPAILDVIRHIIPNADELFNADTAHANGDQQEHKSIAAPEIPYVSWKNHVTN HHHHCCCCCHHHHHHHHHHCCCHHHHCCCCCCCCCCCHHHHHCCCCCCCCCCCHHHCCCE FITIGSPIDKFLALWPDNYLHLYDTGTVTTSAPEKMYHYNFCDEQDPVGHHLEEAMKTPV EEECCCCHHHHHHHCCCCEEEEEECCEEECCCCHHHHCCCCCCCCCCCHHHHHHHHHCCH YQTLFNTDPIGNHDVVFRRYGIPGVAHNLYWTDQELFFGIIDKIIDTKTANTSDDFVWKE HHHHHCCCCCCCCCEEEEECCCCCHHCCCEECHHHHHHHHHHHHHCCCCCCCCCHHHHHH IHEKTRAFKSAKRWAYYLIPLITTLATTALVSYGILNDSLLWRWLSIIAAVLLWVQPNLL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCHH TAYKDETADSRKMAPSWLEDKWNKIRPVRGIFSRLVSAAIEWRRILIVESLGSNTVPVDN HHCCCCCCCHHHCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHEEEEEECCCCCCCCCC QPYDVSERIAFQSQEMTDKPLKYFALLVTVATLSLAGSLALGYTLYYPVEADALLHINVF CCCCHHHHHHHCCHHCCCHHHHHHHHHHHHHHHHHHHHHHHCEEEEEECCCCCEEEEEHH THLSTISGPWLNAGKIAFFFTLSYSLVRFYVAGSFLGAWKRCRPE HHHHHCCCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA