Definition | Chlorobaculum parvum NCIB 8327 chromosome, complete genome. |
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Accession | NC_011027 |
Length | 2,289,249 |
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The map label for this gene is 193213006
Identifier: 193213006
GI number: 193213006
Start: 1472042
End: 1472494
Strand: Direct
Name: 193213006
Synonym: Cpar_1357
Alternate gene names: NA
Gene position: 1472042-1472494 (Clockwise)
Preceding gene: 193213004
Following gene: 193213007
Centisome position: 64.3
GC content: 56.07
Gene sequence:
>453_bases ATGAATACGACACCGCGCGACACCATGCTTATCTCAAGGAAAATCGAGATCGACTACGGCCACACCCTTCCCAACAGCTT CACCTTCTGCAACCAGCTGCACGGCCACCGCGGCGTGATTGTTGCAAGCGTCGAAGGCCCGGTCATCAATCGCGACGGCG ATGCCGAACAGGGCATGGTGATGGATTTCAAGTTCCTGCGCGAAATCATGGACAAGCAGATTCATGACGTGCTCGATCAC GGTTTTGCGGTCTGGAAAGAGGATAAGGAAGACCTCGAATTCATCCTCAAGCGCAACACCCGCGTGCTGGTCACCGACGA GCCCCCCACCGCCGAATACCTCGCCAAATGGGCCTTCAACCAGATCAGCGACAAGCTCCCCGAAGGCGTGACACTCAAAA ACCTCCGCTGGTACGAAACACCAAACAATTGGGCAGACTTCACCGGCGAGTGA
Upstream 100 bases:
>100_bases ATCCACCTGCCCCTTGCCACACCACGCATCAGGTCGTCTGAACGAACGGAAAATGCTCCATGTTTTCTGAAAAATTTTAC GTACACTTGCCTACAGCTCC
Downstream 100 bases:
>100_bases CCCCCGATATCGTCTCGAATCGGAACACCGATTGTCTGGCCAACCAATGTCCTACCTTTTAGCAAAAACCTTGCTAACCT GCTGATTTAGAATCATTTCT
Product: hypothetical protein
Products: NA
Alternate protein names: 6-Pyruvoyl Tetrahydrobiopterin Synthase; Queuosine Biosynthesis Protein QueD; 6-Pyruvoyl-Tetrahydropterin Synthase; 6-Pyruvoyl Tetrahydrobiopterin Synthase Protein; 6-Pyruvoyltetrahydropterin Synthase; 6-Pyruvoyl-Tetrahydropterin Synthase-Like
Number of amino acids: Translated: 150; Mature: 150
Protein sequence:
>150_residues MNTTPRDTMLISRKIEIDYGHTLPNSFTFCNQLHGHRGVIVASVEGPVINRDGDAEQGMVMDFKFLREIMDKQIHDVLDH GFAVWKEDKEDLEFILKRNTRVLVTDEPPTAEYLAKWAFNQISDKLPEGVTLKNLRWYETPNNWADFTGE
Sequences:
>Translated_150_residues MNTTPRDTMLISRKIEIDYGHTLPNSFTFCNQLHGHRGVIVASVEGPVINRDGDAEQGMVMDFKFLREIMDKQIHDVLDH GFAVWKEDKEDLEFILKRNTRVLVTDEPPTAEYLAKWAFNQISDKLPEGVTLKNLRWYETPNNWADFTGE >Mature_150_residues MNTTPRDTMLISRKIEIDYGHTLPNSFTFCNQLHGHRGVIVASVEGPVINRDGDAEQGMVMDFKFLREIMDKQIHDVLDH GFAVWKEDKEDLEFILKRNTRVLVTDEPPTAEYLAKWAFNQISDKLPEGVTLKNLRWYETPNNWADFTGE
Specific function: Unknown
COG id: COG0720
COG function: function code H; 6-pyruvoyl-tetrahydropterin synthase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17382; Mature: 17382
Theoretical pI: Translated: 4.86; Mature: 4.86
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNTTPRDTMLISRKIEIDYGHTLPNSFTFCNQLHGHRGVIVASVEGPVINRDGDAEQGMV CCCCCCCEEEEEEEEEEECCCCCCCCHHHHHHHCCCCCEEEEECCCCEECCCCCCCCCEE MDFKFLREIMDKQIHDVLDHGFAVWKEDKEDLEFILKRNTRVLVTDEPPTAEYLAKWAFN HHHHHHHHHHHHHHHHHHHCCCEEECCCHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHH QISDKLPEGVTLKNLRWYETPNNWADFTGE HHHHHCCCCCEECCEEEEECCCCCCCCCCC >Mature Secondary Structure MNTTPRDTMLISRKIEIDYGHTLPNSFTFCNQLHGHRGVIVASVEGPVINRDGDAEQGMV CCCCCCCEEEEEEEEEEECCCCCCCCHHHHHHHCCCCCEEEEECCCCEECCCCCCCCCEE MDFKFLREIMDKQIHDVLDHGFAVWKEDKEDLEFILKRNTRVLVTDEPPTAEYLAKWAFN HHHHHHHHHHHHHHHHHHHCCCEEECCCHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHH QISDKLPEGVTLKNLRWYETPNNWADFTGE HHHHHCCCCCEECCEEEEECCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA