Definition | Chlorobaculum parvum NCIB 8327 chromosome, complete genome. |
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Accession | NC_011027 |
Length | 2,289,249 |
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The map label for this gene is 193213002
Identifier: 193213002
GI number: 193213002
Start: 1468068
End: 1468649
Strand: Direct
Name: 193213002
Synonym: Cpar_1353
Alternate gene names: NA
Gene position: 1468068-1468649 (Clockwise)
Preceding gene: 193212999
Following gene: 193213003
Centisome position: 64.13
GC content: 50.17
Gene sequence:
>582_bases ATGAACAGAAAAACAGCAGAACCTGTCGTCGACAAGGTCTTTGAGAAACAAGCGTTCGGCGATCTTGAAAAGCTGGGCGA GGTATTCGAAAATTGTCGATTTGTGCAGTGCAACCTGGCACAAGCCGATCTTTCAGGCTTCATGTTCAGGGAATGCTCTT TTGAGCAGTGCGACATGGGGCTTGCAAAACTCATCGACACAGGGTTTCAGGAGGTGAAATTCATCGACTGCAAACTGCTC GGCGTGCAGTTCAGCGACTGTCGGAAACTGCTGCTTGAGATAAACTTCAAGCGATGCATCCTCAAACTTTCAGTTTTCAC CAACCTCGATCTGAAAAACACCGTGTTTGACGACTGCGACATGCAGGAAGCCGATTTCACCGAGGCAAACCTGACGGGAT CACGTTTCGACAACTGCGACCTCCGGCTGGCGATTTTTTTCCACACCAATCTCGAAAAAGCCGATTTGCGCACGGCCGTT AACTTCTCCATCCCGCCTGAATCGAACCGTCTCAGAAAAGCGAAATTCTCACTCCATGGGCTGCCCGGCCTGCTTGAGCA CTACGGTATTGACGTGGAGTAA
Upstream 100 bases:
>100_bases TACTGGATGGATCGATCGAACACCTCAACCCCACGGCGCTGTGAAGAGTTTCAGGAACCGAAAGCCCTCACAAACCGGGT GATAACCTCAACAGGAGCAG
Downstream 100 bases:
>100_bases CCCAACCAATATCGCAATAGCGGTTTGACGTAAAAGGGAATCATGACCTTAACCAAATTGATTACCCAACATGTTGACAA GGTGTTTTCCCGTTCTATAT
Product: pentapeptide repeat-containing protein
Products: NA
Alternate protein names: Pentapeptide Repeat Protein; Protein McbG; Antibiotic Resistance Protein McbG; MCBG Protein-Like; MCBG-Like Protein; Mcbg Like Protein; MCBG Protein; McbG Protein; McbG-Like Protein; Related MCBG Protein; Pentapeptide Repeat; Antibiotic Resistance Protein; Mcbg Protein
Number of amino acids: Translated: 193; Mature: 193
Protein sequence:
>193_residues MNRKTAEPVVDKVFEKQAFGDLEKLGEVFENCRFVQCNLAQADLSGFMFRECSFEQCDMGLAKLIDTGFQEVKFIDCKLL GVQFSDCRKLLLEINFKRCILKLSVFTNLDLKNTVFDDCDMQEADFTEANLTGSRFDNCDLRLAIFFHTNLEKADLRTAV NFSIPPESNRLRKAKFSLHGLPGLLEHYGIDVE
Sequences:
>Translated_193_residues MNRKTAEPVVDKVFEKQAFGDLEKLGEVFENCRFVQCNLAQADLSGFMFRECSFEQCDMGLAKLIDTGFQEVKFIDCKLL GVQFSDCRKLLLEINFKRCILKLSVFTNLDLKNTVFDDCDMQEADFTEANLTGSRFDNCDLRLAIFFHTNLEKADLRTAV NFSIPPESNRLRKAKFSLHGLPGLLEHYGIDVE >Mature_193_residues MNRKTAEPVVDKVFEKQAFGDLEKLGEVFENCRFVQCNLAQADLSGFMFRECSFEQCDMGLAKLIDTGFQEVKFIDCKLL GVQFSDCRKLLLEINFKRCILKLSVFTNLDLKNTVFDDCDMQEADFTEANLTGSRFDNCDLRLAIFFHTNLEKADLRTAV NFSIPPESNRLRKAKFSLHGLPGLLEHYGIDVE
Specific function: Unknown
COG id: COG1357
COG function: function code S; Uncharacterized low-complexity proteins
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22087; Mature: 22087
Theoretical pI: Translated: 4.83; Mature: 4.83
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
4.7 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 6.7 %Cys+Met (Translated Protein) 4.7 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 6.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNRKTAEPVVDKVFEKQAFGDLEKLGEVFENCRFVQCNLAQADLSGFMFRECSFEQCDMG CCCCCCHHHHHHHHHHHHCCCHHHHHHHHHCCEEEEEECCHHHHHHHHHHCCCHHHHCCH LAKLIDTGFQEVKFIDCKLLGVQFSDCRKLLLEINFKRCILKLSVFTNLDLKNTVFDDCD HHHHHHCCHHHEEEEEEEEECCCHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCCCCCC MQEADFTEANLTGSRFDNCDLRLAIFFHTNLEKADLRTAVNFSIPPESNRLRKAKFSLHG CCCCCCCCCCCCCCCCCCCCEEEEEEEECCCCHHHHHEEEEECCCCCCCCHHHHHHHHCC LPGLLEHYGIDVE CCHHHHHCCCCCC >Mature Secondary Structure MNRKTAEPVVDKVFEKQAFGDLEKLGEVFENCRFVQCNLAQADLSGFMFRECSFEQCDMG CCCCCCHHHHHHHHHHHHCCCHHHHHHHHHCCEEEEEECCHHHHHHHHHHCCCHHHHCCH LAKLIDTGFQEVKFIDCKLLGVQFSDCRKLLLEINFKRCILKLSVFTNLDLKNTVFDDCD HHHHHHCCHHHEEEEEEEEECCCHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCCCCCC MQEADFTEANLTGSRFDNCDLRLAIFFHTNLEKADLRTAVNFSIPPESNRLRKAKFSLHG CCCCCCCCCCCCCCCCCCCCEEEEEEEECCCCHHHHHEEEEECCCCCCCCHHHHHHHHCC LPGLLEHYGIDVE CCHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA