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The map label for this gene is 193213003

Identifier: 193213003

GI number: 193213003

Start: 1468854

End: 1469660

Strand: Direct

Name: 193213003

Synonym: Cpar_1354

Alternate gene names: NA

Gene position: 1468854-1469660 (Clockwise)

Preceding gene: 193213002

Following gene: 193213004

Centisome position: 64.16

GC content: 51.3

Gene sequence:

>807_bases
ATGCCATTCAATCGTAACAGAATAGCCCTCTTGGTGCTGCTCCTGCTGACGCTTGCCTCCGGGCAGGCGAAAGGCGCCCA
CGTACTATTTAAAGGGGATTCCGGCCAATTTGAGCAAGGCGGTGAAAGCGCTTCTGAAGTTGCACACCATTTTAATAATG
AACCTTACCTGAACCGAACCGAGTTAGCGATAATCACAGAAATCAACCTGTTGAGAAGCGACCCTGCAGGCTATGCCCGC
CAATACCTTGCCCCTCTAAGAAAATACTACAACGGAAACCTGCTCCAGCTCCCCGGAAAACTTCCCATCAGAACACGCGA
AGGAGTTGATGCGCTCGAAGAATGCATCAACGAACTGGAAAATACCAGACCGATGCGTCCCTTGCTGCCGAGCAAAGGCC
TTACACTGGCCGCTCGTGATCTGGTGCAAGATCAGGGCTTAACCCGAACAACCGGGCATACAGGCAACGACGGCTCTTCG
ATGTCAGACCGGATCGAACGCTACGGACAATGGGATGGATGTATAGCGGAGAATCTCGCTTACGGATTCGATGATGCCCG
CCAAGTCATCGTGGGGCTGCTCATCGATGACGGCGTTCTGTCACGCGGACACAGAAAAAACATGCTGAACGGCACATTCA
GTTATGTCGGTGTAAAAATCGGCCCACATCGCCGCTTTAATACCATGTGCGTTATGGAGTTCGCAGCGCAGTACTCTCTC
TCAGAAGTTCAACCGCATCATTATGAGTCCCCGCATTCAAGATTGTCGAAAAACGTGAGGTCATACTTTGAACCTGAACA
TCGATAG

Upstream 100 bases:

>100_bases
GATAATACCTGTTATTTTCTTTTTATAAACGCCTGATACCATATAATCGATACCACAGGAATTAGGTGTAGAACCATCGA
CACGATCTGTTTTCAAGATC

Downstream 100 bases:

>100_bases
CTATCAAGCAGATCTCGTCCCCTAAGCCGCTAACGTCAAAAACATCCCGATCGTCAGCATGTACGATAGATGACATAACC
AACGGTTTTACAACAATATC

Product: SCP-like extracellular protein

Products: NA

Alternate protein names: Allergen V5/Tpx-1 Family Protein; SCP-Like Extracellular Protein; Allergen V5/TPX-1 Family Protein; Allergen V5/Tpx-1 Related Protein; Allergen V5/Tpx-1 ; Lipoprotein

Number of amino acids: Translated: 268; Mature: 267

Protein sequence:

>268_residues
MPFNRNRIALLVLLLLTLASGQAKGAHVLFKGDSGQFEQGGESASEVAHHFNNEPYLNRTELAIITEINLLRSDPAGYAR
QYLAPLRKYYNGNLLQLPGKLPIRTREGVDALEECINELENTRPMRPLLPSKGLTLAARDLVQDQGLTRTTGHTGNDGSS
MSDRIERYGQWDGCIAENLAYGFDDARQVIVGLLIDDGVLSRGHRKNMLNGTFSYVGVKIGPHRRFNTMCVMEFAAQYSL
SEVQPHHYESPHSRLSKNVRSYFEPEHR

Sequences:

>Translated_268_residues
MPFNRNRIALLVLLLLTLASGQAKGAHVLFKGDSGQFEQGGESASEVAHHFNNEPYLNRTELAIITEINLLRSDPAGYAR
QYLAPLRKYYNGNLLQLPGKLPIRTREGVDALEECINELENTRPMRPLLPSKGLTLAARDLVQDQGLTRTTGHTGNDGSS
MSDRIERYGQWDGCIAENLAYGFDDARQVIVGLLIDDGVLSRGHRKNMLNGTFSYVGVKIGPHRRFNTMCVMEFAAQYSL
SEVQPHHYESPHSRLSKNVRSYFEPEHR
>Mature_267_residues
PFNRNRIALLVLLLLTLASGQAKGAHVLFKGDSGQFEQGGESASEVAHHFNNEPYLNRTELAIITEINLLRSDPAGYARQ
YLAPLRKYYNGNLLQLPGKLPIRTREGVDALEECINELENTRPMRPLLPSKGLTLAARDLVQDQGLTRTTGHTGNDGSSM
SDRIERYGQWDGCIAENLAYGFDDARQVIVGLLIDDGVLSRGHRKNMLNGTFSYVGVKIGPHRRFNTMCVMEFAAQYSLS
EVQPHHYESPHSRLSKNVRSYFEPEHR

Specific function: Unknown

COG id: COG2340

COG function: function code S; Uncharacterized protein with SCP/PR1 domains

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 30066; Mature: 29935

Theoretical pI: Translated: 7.71; Mature: 7.71

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPFNRNRIALLVLLLLTLASGQAKGAHVLFKGDSGQFEQGGESASEVAHHFNNEPYLNRT
CCCCCHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCCCCHHHHHHHHCCCCCCCCCH
ELAIITEINLLRSDPAGYARQYLAPLRKYYNGNLLQLPGKLPIRTREGVDALEECINELE
HEEEEEEHHHHHCCCHHHHHHHHHHHHHHHCCCEEECCCCCCCCCCCCHHHHHHHHHHHH
NTRPMRPLLPSKGLTLAARDLVQDQGLTRTTGHTGNDGSSMSDRIERYGQWDGCIAENLA
CCCCCCCCCCCCCCHHHHHHHHHHCCCEECCCCCCCCCCHHHHHHHHCCCCCCHHHHHHH
YGFDDARQVIVGLLIDDGVLSRGHRKNMLNGTFSYVGVKIGPHRRFNTMCVMEFAAQYSL
CCHHHHHHHHHHHHHCCHHHCCCCHHHHCCCCEEEEEEEECCCCCHHHHHHHHHHHHHHH
SEVQPHHYESPHSRLSKNVRSYFEPEHR
HHCCCCCCCCHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure 
PFNRNRIALLVLLLLTLASGQAKGAHVLFKGDSGQFEQGGESASEVAHHFNNEPYLNRT
CCCCHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCCCCHHHHHHHHCCCCCCCCCH
ELAIITEINLLRSDPAGYARQYLAPLRKYYNGNLLQLPGKLPIRTREGVDALEECINELE
HEEEEEEHHHHHCCCHHHHHHHHHHHHHHHCCCEEECCCCCCCCCCCCHHHHHHHHHHHH
NTRPMRPLLPSKGLTLAARDLVQDQGLTRTTGHTGNDGSSMSDRIERYGQWDGCIAENLA
CCCCCCCCCCCCCCHHHHHHHHHHCCCEECCCCCCCCCCHHHHHHHHCCCCCCHHHHHHH
YGFDDARQVIVGLLIDDGVLSRGHRKNMLNGTFSYVGVKIGPHRRFNTMCVMEFAAQYSL
CCHHHHHHHHHHHHHCCHHHCCCCHHHHCCCCEEEEEEEECCCCCHHHHHHHHHHHHHHH
SEVQPHHYESPHSRLSKNVRSYFEPEHR
HHCCCCCCCCHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA