Definition | Rhodopseudomonas palustris TIE-1 chromosome, complete genome. |
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Accession | NC_011004 |
Length | 5,744,041 |
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The map label for this gene is 192288829
Identifier: 192288829
GI number: 192288829
Start: 427232
End: 428011
Strand: Reverse
Name: 192288829
Synonym: Rpal_0398
Alternate gene names: NA
Gene position: 428011-427232 (Counterclockwise)
Preceding gene: 192288830
Following gene: 192288828
Centisome position: 7.45
GC content: 68.21
Gene sequence:
>780_bases ATGAACCGCAACGGACTTCTCATCGCGCTGGCGCTGTTCGCCGGCATCGGGCTGACGTTCGGTCTGTTTCCGAGCCTCGA CCTATGGCTGGCCGGCCTGTTCTACGACACGGCCGCCAAGACCTTCCCGATGCGCTCGATGCCGGATCTCGAATTCGCCC GCGACTTTGCGATGTGGGTCGCCTGGGCGATCGCGGCGCCGTCGATCTTCGCGCTGGTCTATAAGATGATCCGGCCGGAC CGGCCGCTGGTGATGCCCGGCCGTACGGTGGCGTTTCTGCTGATCAGCATCACGCTGTCGGCCGGCGTCCTCACCAACAT GACCTTCAAGAGCCATTGGGGCCGGCCGCGGCCGGCCGCGGTGACCGAATTCAATGGCCCGTGGCAGTTCAAGGCGTGGT GGGACAATTCCGGCGCCTGCCCGAAGAACTGCTCGTTCTTCTCCGGCGAGGGCGCCACCGCCTATTGGACCTTCGCGCCC GCGGCGCTGACCCCGCCGGCGGTGCGCCCCTACGCCTATGCGGCGGCCTTCACCTTCGGCACCGTCACCAGCGGCCTGCG GATGGCGTTCGGCGGCCACTTCTTCACGGACGTGGCGATCGCCGGCCTCGTCACCTTCCTGGTGGTCTGGCTGCTTTACG CACTGATCTACCGCTGGGCCTGGAGCCGGACCTCGGACGAGGCGGTCGACGCGGCGCTGACCCGCGCGTTCTGGCCGCTG TACCGGCTGCGGCTGAAGAAATGGCGCGGCCAGGACATCGGCCCGGCGCCGGCCGCCTGA
Upstream 100 bases:
>100_bases TGGTCGCTGGCCGCAACGCCGGCGCCTGGCGCGATCCGCCGCGCCGGCGCGCGCCCTTGCCGCCTTCCCAACCCGAACCG CCTCCGGTAAACCGCGCCCC
Downstream 100 bases:
>100_bases GCCGCATCCGCACCTCCGCCGCGATTAAACGCGTGCCGCTAGCCGCGAAGTTTGATATGCGCGCAGCAACCGCAACTGCT TCAACCGATTGGGACTTCCA
Product: PA-phosphatase-like phosphoesterase
Products: NA
Alternate protein names: Phosphoesterase PA-Phosphatase Related Protein; PAP2 Superfamily Protein; PA-Phosphatase Related Phosphoesterase; Transmembrane Protein; PAP2 Family Protein; Membrane-Associated Phospholipid Phosphatase; Phosphatase Protein; Superfamily Protein; NADHUbiquinone Oxidoreductase F Subunit
Number of amino acids: Translated: 259; Mature: 259
Protein sequence:
>259_residues MNRNGLLIALALFAGIGLTFGLFPSLDLWLAGLFYDTAAKTFPMRSMPDLEFARDFAMWVAWAIAAPSIFALVYKMIRPD RPLVMPGRTVAFLLISITLSAGVLTNMTFKSHWGRPRPAAVTEFNGPWQFKAWWDNSGACPKNCSFFSGEGATAYWTFAP AALTPPAVRPYAYAAAFTFGTVTSGLRMAFGGHFFTDVAIAGLVTFLVVWLLYALIYRWAWSRTSDEAVDAALTRAFWPL YRLRLKKWRGQDIGPAPAA
Sequences:
>Translated_259_residues MNRNGLLIALALFAGIGLTFGLFPSLDLWLAGLFYDTAAKTFPMRSMPDLEFARDFAMWVAWAIAAPSIFALVYKMIRPD RPLVMPGRTVAFLLISITLSAGVLTNMTFKSHWGRPRPAAVTEFNGPWQFKAWWDNSGACPKNCSFFSGEGATAYWTFAP AALTPPAVRPYAYAAAFTFGTVTSGLRMAFGGHFFTDVAIAGLVTFLVVWLLYALIYRWAWSRTSDEAVDAALTRAFWPL YRLRLKKWRGQDIGPAPAA >Mature_259_residues MNRNGLLIALALFAGIGLTFGLFPSLDLWLAGLFYDTAAKTFPMRSMPDLEFARDFAMWVAWAIAAPSIFALVYKMIRPD RPLVMPGRTVAFLLISITLSAGVLTNMTFKSHWGRPRPAAVTEFNGPWQFKAWWDNSGACPKNCSFFSGEGATAYWTFAP AALTPPAVRPYAYAAAFTFGTVTSGLRMAFGGHFFTDVAIAGLVTFLVVWLLYALIYRWAWSRTSDEAVDAALTRAFWPL YRLRLKKWRGQDIGPAPAA
Specific function: Unknown
COG id: COG0671
COG function: function code I; Membrane-associated phospholipid phosphatase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 28717; Mature: 28717
Theoretical pI: Translated: 10.22; Mature: 10.22
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNRNGLLIALALFAGIGLTFGLFPSLDLWLAGLFYDTAAKTFPMRSMPDLEFARDFAMWV CCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHH AWAIAAPSIFALVYKMIRPDRPLVMPGRTVAFLLISITLSAGVLTNMTFKSHWGRPRPAA HHHHHHHHHHHHHHHHHCCCCCEECCCHHHHHHHHHHHHHHHHHHCCCHHHHCCCCCCCE VTEFNGPWQFKAWWDNSGACPKNCSFFSGEGATAYWTFAPAALTPPAVRPYAYAAAFTFG EEECCCCEEEEEEECCCCCCCCCCCEECCCCCEEEEEECCCCCCCCCCCHHHHHHHHHHH TVTSGLRMAFGGHFFTDVAIAGLVTFLVVWLLYALIYRWAWSRTSDEAVDAALTRAFWPL HHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHH YRLRLKKWRGQDIGPAPAA HHHHHHHHCCCCCCCCCCC >Mature Secondary Structure MNRNGLLIALALFAGIGLTFGLFPSLDLWLAGLFYDTAAKTFPMRSMPDLEFARDFAMWV CCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHH AWAIAAPSIFALVYKMIRPDRPLVMPGRTVAFLLISITLSAGVLTNMTFKSHWGRPRPAA HHHHHHHHHHHHHHHHHCCCCCEECCCHHHHHHHHHHHHHHHHHHCCCHHHHCCCCCCCE VTEFNGPWQFKAWWDNSGACPKNCSFFSGEGATAYWTFAPAALTPPAVRPYAYAAAFTFG EEECCCCEEEEEEECCCCCCCCCCCEECCCCCEEEEEECCCCCCCCCCCHHHHHHHHHHH TVTSGLRMAFGGHFFTDVAIAGLVTFLVVWLLYALIYRWAWSRTSDEAVDAALTRAFWPL HHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHH YRLRLKKWRGQDIGPAPAA HHHHHHHHCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA