Definition | Rhodopseudomonas palustris TIE-1 chromosome, complete genome. |
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Accession | NC_011004 |
Length | 5,744,041 |
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The map label for this gene is argG [H]
Identifier: 192288828
GI number: 192288828
Start: 425794
End: 427131
Strand: Reverse
Name: argG [H]
Synonym: Rpal_0397
Alternate gene names: 192288828
Gene position: 427131-425794 (Counterclockwise)
Preceding gene: 192288829
Following gene: 192288827
Centisome position: 7.44
GC content: 64.95
Gene sequence:
>1338_bases ATGACTACGATCTTGAAAAGCCTGCCCAAGGGCGAAAACGTCGGCATCGCTTTCTCAGGGGGTCTCGATACCAGCGCGGC GCTGCTGTGGATGAAGCAGAAGGGCGCCAAGGTGTTCGCCTATACGGCGAACCTCGGCCAGCCCGACGAGGCCGACTACG ACGCGATCCCGCGCAAGGCGATGGAGTTCGGCGCCGAGAAGGCCCGGCTGGTCGACTGCCGCACCCAGCTGGTGCACGAA GGCATCGCGGCGATCCAGGCCGGCGCCTTCCACGTCTCGACCGGCGGCATCGCGTATTTCAACACCACCCCGCTCGGCCG CGCCGTGACCGGCACCATGCTGGTGTCGGCGATGAAGGAAGACGGCGTCAACATCTGGGGCGACGGCTCGACCTACAAGG GCAACGACATCGAGCGGTTCTACCGCTACGGCCTGCTCACCAATCCGGCCTTGCGGATCTACAAGCCCTGGCTCGACCAG CAGTTCATCGACGAGCTCGGCGGCCGCGCCGAGATGTCGGCATTCATGACCTCGCACGGCTTCGCCTACAAGATGAGCGC CGAAAAGGCGTACTCGACCGACAGCAACCTGCTCGGCGCCACCCACGAGGCCAAGGATCTCGAACACCTCGACAGCGGCA TCAAGATCGTCAACCCGATCATGGGCGTGCCGTTCTGGCGCGACGATTGCGCGGTGAAAGCCGAAGCCGTCACGGTGCGG TTCGAGGAAGGCCAGCCGGTCGCGCTCAATGGCCAGACTTTCACGGATCCGGTCGCGATGTTCTACGAAGCCAATGCCAT TGGCGGACGTCACGGCCTCGGCATGAGCGACCAGATCGAGAACCGCATCATCGAGGCCAAGAGCCGCGGCATCTACGAGG CGCCCGGCATGGCGCTGCTGCACATCGCCTATGAGCGGCTGGTCACCGGCATTCACAACGAAGACACCATCGAGCAGTAC CGCATCAACGGCATGAAGCTCGGCCGGCTGCTGTATCAGGGCCGCTGGTTCGACTCACAGGCTTTGATGCTGCGCGAGAC CGCGCAGCGCTGGGTCGCCCGTGCCGTCACCGGCGAGGTGACGCTCGAACTGCGCCGCGGCAACGACTACTCGATCCTCA ACACCGTCAGCCCGAACCTGACCTACGCGCCGGAGCGGCTGAGCATGGAGAAGGTCGAGGACGCGCCGTTCACGCCGGCC GACCGCATCGGCCAGCTCACCATGCGCAACCTCGACATCACCGACACCCGCGCCAAGCTCGGCCTCTACGCCAAGACCGG CCTGCTGTCCTCCGGCGAAGGCACCCCGATTCCGCAGCTGGAAAACGACAAGGGCTGA
Upstream 100 bases:
>100_bases GCCGCATCCGCACCTCCGCCGCGATTAAACGCGTGCCGCTAGCCGCGAAGTTTGATATGCGCGCAGCAACCGCAACTGCT TCAACCGATTGGGACTTCCA
Downstream 100 bases:
>100_bases GGGCCTTCACGGTCATTCCGGGGCGCTCACGGCAGTGAGCGAACCCGGAATCCCGAGATTGTTTGGCTGTCTCGGTGCCC CGAACTTCGAGATTTCCGGT
Product: argininosuccinate synthase
Products: NA
Alternate protein names: Citrulline--aspartate ligase [H]
Number of amino acids: Translated: 445; Mature: 444
Protein sequence:
>445_residues MTTILKSLPKGENVGIAFSGGLDTSAALLWMKQKGAKVFAYTANLGQPDEADYDAIPRKAMEFGAEKARLVDCRTQLVHE GIAAIQAGAFHVSTGGIAYFNTTPLGRAVTGTMLVSAMKEDGVNIWGDGSTYKGNDIERFYRYGLLTNPALRIYKPWLDQ QFIDELGGRAEMSAFMTSHGFAYKMSAEKAYSTDSNLLGATHEAKDLEHLDSGIKIVNPIMGVPFWRDDCAVKAEAVTVR FEEGQPVALNGQTFTDPVAMFYEANAIGGRHGLGMSDQIENRIIEAKSRGIYEAPGMALLHIAYERLVTGIHNEDTIEQY RINGMKLGRLLYQGRWFDSQALMLRETAQRWVARAVTGEVTLELRRGNDYSILNTVSPNLTYAPERLSMEKVEDAPFTPA DRIGQLTMRNLDITDTRAKLGLYAKTGLLSSGEGTPIPQLENDKG
Sequences:
>Translated_445_residues MTTILKSLPKGENVGIAFSGGLDTSAALLWMKQKGAKVFAYTANLGQPDEADYDAIPRKAMEFGAEKARLVDCRTQLVHE GIAAIQAGAFHVSTGGIAYFNTTPLGRAVTGTMLVSAMKEDGVNIWGDGSTYKGNDIERFYRYGLLTNPALRIYKPWLDQ QFIDELGGRAEMSAFMTSHGFAYKMSAEKAYSTDSNLLGATHEAKDLEHLDSGIKIVNPIMGVPFWRDDCAVKAEAVTVR FEEGQPVALNGQTFTDPVAMFYEANAIGGRHGLGMSDQIENRIIEAKSRGIYEAPGMALLHIAYERLVTGIHNEDTIEQY RINGMKLGRLLYQGRWFDSQALMLRETAQRWVARAVTGEVTLELRRGNDYSILNTVSPNLTYAPERLSMEKVEDAPFTPA DRIGQLTMRNLDITDTRAKLGLYAKTGLLSSGEGTPIPQLENDKG >Mature_444_residues TTILKSLPKGENVGIAFSGGLDTSAALLWMKQKGAKVFAYTANLGQPDEADYDAIPRKAMEFGAEKARLVDCRTQLVHEG IAAIQAGAFHVSTGGIAYFNTTPLGRAVTGTMLVSAMKEDGVNIWGDGSTYKGNDIERFYRYGLLTNPALRIYKPWLDQQ FIDELGGRAEMSAFMTSHGFAYKMSAEKAYSTDSNLLGATHEAKDLEHLDSGIKIVNPIMGVPFWRDDCAVKAEAVTVRF EEGQPVALNGQTFTDPVAMFYEANAIGGRHGLGMSDQIENRIIEAKSRGIYEAPGMALLHIAYERLVTGIHNEDTIEQYR INGMKLGRLLYQGRWFDSQALMLRETAQRWVARAVTGEVTLELRRGNDYSILNTVSPNLTYAPERLSMEKVEDAPFTPAD RIGQLTMRNLDITDTRAKLGLYAKTGLLSSGEGTPIPQLENDKG
Specific function: Arginine biosynthesis; seventh step. [C]
COG id: COG0137
COG function: function code E; Argininosuccinate synthase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the argininosuccinate synthase family. Type 2 subfamily [H]
Homologues:
Organism=Homo sapiens, GI53759107, Length=415, Percent_Identity=29.3975903614458, Blast_Score=155, Evalue=5e-38, Organism=Homo sapiens, GI16950633, Length=415, Percent_Identity=29.3975903614458, Blast_Score=155, Evalue=5e-38, Organism=Escherichia coli, GI1789563, Length=442, Percent_Identity=80.0904977375566, Blast_Score=734, Evalue=0.0, Organism=Saccharomyces cerevisiae, GI6324514, Length=421, Percent_Identity=29.2161520190024, Blast_Score=157, Evalue=4e-39, Organism=Drosophila melanogaster, GI21358151, Length=429, Percent_Identity=28.6713286713287, Blast_Score=171, Evalue=8e-43,
Paralogues:
None
Copy number: 380 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001518 - InterPro: IPR018223 - InterPro: IPR014729 [H]
Pfam domain/function: PF00764 Arginosuc_synth [H]
EC number: =6.3.4.5 [H]
Molecular weight: Translated: 48969; Mature: 48838
Theoretical pI: Translated: 5.71; Mature: 5.71
Prosite motif: PS00564 ARGININOSUCCIN_SYN_1 ; PS00565 ARGININOSUCCIN_SYN_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTILKSLPKGENVGIAFSGGLDTSAALLWMKQKGAKVFAYTANLGQPDEADYDAIPRKA CCCHHHHCCCCCCEEEEEECCCCCCCEEEEEECCCCEEEEEECCCCCCCCCCHHHCCHHH MEFGAEKARLVDCRTQLVHEGIAAIQAGAFHVSTGGIAYFNTTPLGRAVTGTMLVSAMKE HHCCCCHHHHHHHHHHHHHHHHHHHHCCCEEEECCCEEEEECCCCCHHHHHHHHHHHHHH DGVNIWGDGSTYKGNDIERFYRYGLLTNPALRIYKPWLDQQFIDELGGRAEMSAFMTSHG CCCEEECCCCCCCCCHHHHHHHHCCCCCCCHHEEHHHCCHHHHHHHCCHHHHHHHHHCCC FAYKMSAEKAYSTDSNLLGATHEAKDLEHLDSGIKIVNPIMGVPFWRDDCAVKAEAVTVR EEEEECCCHHCCCCCCCCCCCCHHHHHHHHHCCCEEHHHHHCCCCCCCCCCEEEEEEEEE FEEGQPVALNGQTFTDPVAMFYEANAIGGRHGLGMSDQIENRIIEAKSRGIYEAPGMALL ECCCCEEEECCCCCCCHHHHEEECCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCHHHH HIAYERLVTGIHNEDTIEQYRINGMKLGRLLYQGRWFDSQALMLRETAQRWVARAVTGEV HHHHHHHHHCCCCCCHHHHHHCCCCHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCEE TLELRRGNDYSILNTVSPNLTYAPERLSMEKVEDAPFTPADRIGQLTMRNLDITDTRAKL EEEEECCCCEEEEEECCCCCEECCCCCCHHHHCCCCCCCHHHHCCEEECCCCCCCCHHHH GLYAKTGLLSSGEGTPIPQLENDKG EEEEECCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure TTILKSLPKGENVGIAFSGGLDTSAALLWMKQKGAKVFAYTANLGQPDEADYDAIPRKA CCHHHHCCCCCCEEEEEECCCCCCCEEEEEECCCCEEEEEECCCCCCCCCCHHHCCHHH MEFGAEKARLVDCRTQLVHEGIAAIQAGAFHVSTGGIAYFNTTPLGRAVTGTMLVSAMKE HHCCCCHHHHHHHHHHHHHHHHHHHHCCCEEEECCCEEEEECCCCCHHHHHHHHHHHHHH DGVNIWGDGSTYKGNDIERFYRYGLLTNPALRIYKPWLDQQFIDELGGRAEMSAFMTSHG CCCEEECCCCCCCCCHHHHHHHHCCCCCCCHHEEHHHCCHHHHHHHCCHHHHHHHHHCCC FAYKMSAEKAYSTDSNLLGATHEAKDLEHLDSGIKIVNPIMGVPFWRDDCAVKAEAVTVR EEEEECCCHHCCCCCCCCCCCCHHHHHHHHHCCCEEHHHHHCCCCCCCCCCEEEEEEEEE FEEGQPVALNGQTFTDPVAMFYEANAIGGRHGLGMSDQIENRIIEAKSRGIYEAPGMALL ECCCCEEEECCCCCCCHHHHEEECCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCHHHH HIAYERLVTGIHNEDTIEQYRINGMKLGRLLYQGRWFDSQALMLRETAQRWVARAVTGEV HHHHHHHHHCCCCCCHHHHHHCCCCHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCEE TLELRRGNDYSILNTVSPNLTYAPERLSMEKVEDAPFTPADRIGQLTMRNLDITDTRAKL EEEEECCCCEEEEEECCCCCEECCCCCCHHHHCCCCCCCHHHHCCEEECCCCCCCCHHHH GLYAKTGLLSSGEGTPIPQLENDKG EEEEECCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA