Definition Rhodopseudomonas palustris TIE-1 chromosome, complete genome.
Accession NC_011004
Length 5,744,041

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The map label for this gene is 192288830

Identifier: 192288830

GI number: 192288830

Start: 428008

End: 428508

Strand: Reverse

Name: 192288830

Synonym: Rpal_0399

Alternate gene names: NA

Gene position: 428508-428008 (Counterclockwise)

Preceding gene: 192288831

Following gene: 192288829

Centisome position: 7.46

GC content: 67.86

Gene sequence:

>501_bases
ATGGCATTGCTCGGCCGCCTGTTCGTGATCGCGATCGGCTTTCTGCTCGCCTCGATCGCCGCCGGCCTGGTGGTGGTCGG
GATGCTGCTGTTTCCCGAGCTGAGCCAGATCGCCGACGGCCCGATCGACCCCGACGCGCTGAATATCATGATGGGCTTCG
GCTTCATCTTCGTGTCCGGCTTCGCCCTGCTGCCGGCGCTGGTGGTGGTGCTGATCACCGAAGCGTTCTCGATCCGCAGC
GCGCTGGCCTATGCGATCGGCGGGGGCCTGGTCGGAGTGGCCTGCTATCTTGGCCTGGTGCCGTTCGATCCCGCGACGCT
GCATTTCGATGGCATCATCCGCCGCCACCTCGAAATCATGACCGGGGCCGGCATCGTCGGCGGCATGGTGTATTGGCTGG
TCGCTGGCCGCAACGCCGGCGCCTGGCGCGATCCGCCGCGCCGGCGCGCGCCCTTGCCGCCTTCCCAACCCGAACCGCCT
CCGGTAAACCGCGCCCCATGA

Upstream 100 bases:

>100_bases
ACACCGCAGTTCATCCGCTGGTGAGCGCGATCCGCGCCGAACTCGACAACGACACAAGGGCGCGGATGGCAGCGCAGCAA
GCTTCCGGAGCACCCCACTG

Downstream 100 bases:

>100_bases
ACCGCAACGGACTTCTCATCGCGCTGGCGCTGTTCGCCGGCATCGGGCTGACGTTCGGTCTGTTTCCGAGCCTCGACCTA
TGGCTGGCCGGCCTGTTCTA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 166; Mature: 165

Protein sequence:

>166_residues
MALLGRLFVIAIGFLLASIAAGLVVVGMLLFPELSQIADGPIDPDALNIMMGFGFIFVSGFALLPALVVVLITEAFSIRS
ALAYAIGGGLVGVACYLGLVPFDPATLHFDGIIRRHLEIMTGAGIVGGMVYWLVAGRNAGAWRDPPRRRAPLPPSQPEPP
PVNRAP

Sequences:

>Translated_166_residues
MALLGRLFVIAIGFLLASIAAGLVVVGMLLFPELSQIADGPIDPDALNIMMGFGFIFVSGFALLPALVVVLITEAFSIRS
ALAYAIGGGLVGVACYLGLVPFDPATLHFDGIIRRHLEIMTGAGIVGGMVYWLVAGRNAGAWRDPPRRRAPLPPSQPEPP
PVNRAP
>Mature_165_residues
ALLGRLFVIAIGFLLASIAAGLVVVGMLLFPELSQIADGPIDPDALNIMMGFGFIFVSGFALLPALVVVLITEAFSIRSA
LAYAIGGGLVGVACYLGLVPFDPATLHFDGIIRRHLEIMTGAGIVGGMVYWLVAGRNAGAWRDPPRRRAPLPPSQPEPPP
VNRAP

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 17458; Mature: 17327

Theoretical pI: Translated: 7.52; Mature: 7.52

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MALLGRLFVIAIGFLLASIAAGLVVVGMLLFPELSQIADGPIDPDALNIMMGFGFIFVSG
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHH
FALLPALVVVLITEAFSIRSALAYAIGGGLVGVACYLGLVPFDPATLHFDGIIRRHLEIM
HHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHH
TGAGIVGGMVYWLVAGRNAGAWRDPPRRRAPLPPSQPEPPPVNRAP
HCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
ALLGRLFVIAIGFLLASIAAGLVVVGMLLFPELSQIADGPIDPDALNIMMGFGFIFVSG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHH
FALLPALVVVLITEAFSIRSALAYAIGGGLVGVACYLGLVPFDPATLHFDGIIRRHLEIM
HHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHH
TGAGIVGGMVYWLVAGRNAGAWRDPPRRRAPLPPSQPEPPPVNRAP
HCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA