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The map label for this gene is yebC [C]

Identifier: 190571591

GI number: 190571591

Start: 1287823

End: 1288563

Strand: Direct

Name: yebC [C]

Synonym: WPa_1214

Alternate gene names: 190571591

Gene position: 1287823-1288563 (Clockwise)

Preceding gene: 190571590

Following gene: 190571592

Centisome position: 86.87

GC content: 36.44

Gene sequence:

>741_bases
ATGGCTGGTCATTCACAGTTTTCAAATATAAAACATCGAAAAGGTGCTCAGGATGCAAAGCGCTCGCAAAAATTTACGAA
GCTCATTAGGGAAATAACAGTTGCTGCAAAACAAGGGCTAACTGATCCCGAGCTTAATCCACGTCTTCGCTCTGCTATCT
TTTCTGCGCGAAAGGAAAATCTACCAAAAGATAAAATAGAAACAGCAATAAAAAATGCAGCTGGTAACGTTGCTGGAGAA
AGTTATGAAGAAATACAATATGAAGGCTGCGGACCTTCTGGTGCTGCACTTATTGTCCATGCTCTGACAAATAATCGCAA
CCGAACTGCTTCTGAGATACGTTATATCTTTTCTCGCAAAGGCGGTAATTTGGGAGAAACAGGATGTGTGAGTTACCTTT
TCGATCATGTAGGCTTAATTGTCTATAAAGCAGAGGGTATAAATTTTGAAGATTTATTTAACTATGGAATTGAATTAGAA
GTATTGAATGTTGAGGAAAATAACAAGGAAGAATTATATGTTATAACTTGTGGAGTGAAAGATTTTGGTAGAGTGCGTGA
TGCTTTCTATACAAAATTTGGAGAACCAGAACTTGCTCGTCTTTCATGGCAACCAAAGGACCTGATTGAAGTTAGCGACA
AAGAATTAATTGATAAATTATCTATATTAGTTGAAGAGCTAGAAGATAATGATGATGTGCAGTATGTTGAAGGTAATTTT
ATTTTTGCTGATAAACTATGA

Upstream 100 bases:

>100_bases
GTTATTAGTTATTTAATAACAGCTCACTTAGCTCTTGGCCTTGACTTAGAAGCTGAGCAGTATGAAAATATGTTAGTAGA
AGGGGTGAATTAGTTTTCTT

Downstream 100 bases:

>100_bases
GGCTGGTAATATTTCTACTGCTTTGTATTTTACCAGCATATGCAACTGAAACATTTGCGCAGAAAGACTATTGTCATTCC
AGTGCCCAGACACTGGAAAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 246; Mature: 245

Protein sequence:

>246_residues
MAGHSQFSNIKHRKGAQDAKRSQKFTKLIREITVAAKQGLTDPELNPRLRSAIFSARKENLPKDKIETAIKNAAGNVAGE
SYEEIQYEGCGPSGAALIVHALTNNRNRTASEIRYIFSRKGGNLGETGCVSYLFDHVGLIVYKAEGINFEDLFNYGIELE
VLNVEENNKEELYVITCGVKDFGRVRDAFYTKFGEPELARLSWQPKDLIEVSDKELIDKLSILVEELEDNDDVQYVEGNF
IFADKL

Sequences:

>Translated_246_residues
MAGHSQFSNIKHRKGAQDAKRSQKFTKLIREITVAAKQGLTDPELNPRLRSAIFSARKENLPKDKIETAIKNAAGNVAGE
SYEEIQYEGCGPSGAALIVHALTNNRNRTASEIRYIFSRKGGNLGETGCVSYLFDHVGLIVYKAEGINFEDLFNYGIELE
VLNVEENNKEELYVITCGVKDFGRVRDAFYTKFGEPELARLSWQPKDLIEVSDKELIDKLSILVEELEDNDDVQYVEGNF
IFADKL
>Mature_245_residues
AGHSQFSNIKHRKGAQDAKRSQKFTKLIREITVAAKQGLTDPELNPRLRSAIFSARKENLPKDKIETAIKNAAGNVAGES
YEEIQYEGCGPSGAALIVHALTNNRNRTASEIRYIFSRKGGNLGETGCVSYLFDHVGLIVYKAEGINFEDLFNYGIELEV
LNVEENNKEELYVITCGVKDFGRVRDAFYTKFGEPELARLSWQPKDLIEVSDKELIDKLSILVEELEDNDDVQYVEGNFI
FADKL

Specific function: Unknown

COG id: COG0217

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the TACO1 family

Homologues:

Organism=Homo sapiens, GI27545315, Length=247, Percent_Identity=28.7449392712551, Blast_Score=107, Evalue=8e-24,
Organism=Escherichia coli, GI1788171, Length=246, Percent_Identity=39.8373983739837, Blast_Score=170, Evalue=7e-44,
Organism=Escherichia coli, GI1788294, Length=239, Percent_Identity=37.6569037656904, Blast_Score=135, Evalue=2e-33,
Organism=Caenorhabditis elegans, GI17556100, Length=186, Percent_Identity=31.7204301075269, Blast_Score=70, Evalue=1e-12,
Organism=Saccharomyces cerevisiae, GI6321458, Length=147, Percent_Identity=38.0952380952381, Blast_Score=98, Evalue=1e-21,
Organism=Drosophila melanogaster, GI24583305, Length=143, Percent_Identity=32.8671328671329, Blast_Score=66, Evalue=2e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y1214_WOLPP (B3CNE0)

Other databases:

- EMBL:   AM999887
- RefSeq:   YP_001975949.1
- EnsemblBacteria:   EBWOLT00000000896
- GeneID:   6384531
- GenomeReviews:   AM999887_GR
- KEGG:   wpi:WPa_1214
- GeneTree:   EBGT00050000031125
- HOGENOM:   HBG715231
- OMA:   NDDVQYV
- ProtClustDB:   PRK00110
- HAMAP:   MF_00693
- InterPro:   IPR002876
- InterPro:   IPR017856
- Gene3D:   G3DSA:1.10.10.200
- PANTHER:   PTHR12532
- TIGRFAMs:   TIGR01033

Pfam domain/function: PF01709 DUF28; SSF75625 DUF28

EC number: NA

Molecular weight: Translated: 27657; Mature: 27526

Theoretical pI: Translated: 4.98; Mature: 4.98

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
0.4 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
1.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAGHSQFSNIKHRKGAQDAKRSQKFTKLIREITVAAKQGLTDPELNPRLRSAIFSARKEN
CCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHC
LPKDKIETAIKNAAGNVAGESYEEIQYEGCGPSGAALIVHALTNNRNRTASEIRYIFSRK
CCHHHHHHHHHHHCCCCCCCCHHHHEECCCCCCCCEEEEEEECCCCCCHHHHHHHHHHHC
GGNLGETGCVSYLFDHVGLIVYKAEGINFEDLFNYGIELEVLNVEENNKEELYVITCGVK
CCCCCHHHHHHHHHHHHCEEEEEECCCCHHHHHHCCCEEEEEECCCCCCCEEEEEEECCH
DFGRVRDAFYTKFGEPELARLSWQPKDLIEVSDKELIDKLSILVEELEDNDDVQYVEGNF
HHHHHHHHHHHHCCCCHHHHCCCCCHHHHHCCHHHHHHHHHHHHHHHCCCCCEEEEECCE
IFADKL
EEECCC
>Mature Secondary Structure 
AGHSQFSNIKHRKGAQDAKRSQKFTKLIREITVAAKQGLTDPELNPRLRSAIFSARKEN
CCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHC
LPKDKIETAIKNAAGNVAGESYEEIQYEGCGPSGAALIVHALTNNRNRTASEIRYIFSRK
CCHHHHHHHHHHHCCCCCCCCHHHHEECCCCCCCCEEEEEEECCCCCCHHHHHHHHHHHC
GGNLGETGCVSYLFDHVGLIVYKAEGINFEDLFNYGIELEVLNVEENNKEELYVITCGVK
CCCCCHHHHHHHHHHHHCEEEEEECCCCHHHHHHCCCEEEEEECCCCCCCEEEEEEECCH
DFGRVRDAFYTKFGEPELARLSWQPKDLIEVSDKELIDKLSILVEELEDNDDVQYVEGNF
HHHHHHHHHHHHCCCCHHHHCCCCCHHHHHCCHHHHHHHHHHHHHHHCCCCCEEEEECCE
IFADKL
EEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA