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The map label for this gene is yebA [C]

Identifier: 190571592

GI number: 190571592

Start: 1288560

End: 1289600

Strand: Direct

Name: yebA [C]

Synonym: WPa_1215

Alternate gene names: 190571592

Gene position: 1288560-1289600 (Clockwise)

Preceding gene: 190571591

Following gene: 190571593

Centisome position: 86.92

GC content: 34.87

Gene sequence:

>1041_bases
ATGAGGCTGGTAATATTTCTACTGCTTTGTATTTTACCAGCATATGCAACTGAAACATTTGCGCAGAAAGACTATTGTCA
TTCCAGTGCCCAGACACTGGAAATTGATTGTAAACAGCACGCTATACAACATTTTCGATTAAAAAACTGGTCAAGCACTG
GAATGACACTAACCCACTCTCCAGTGTTATTCCAAGACGGGATCAGGAAAAAAAAATCTACAGAAAGTGATAGAAAGTTG
TTATTCATATCCAGTGACATAAAATCCTCTTTTTTTGATGCAGAAGGTTTGGCGCCAGATACAATAATGAGATTAATCGG
CATATATAAAGATTATGGTGTAGATTTTAAAAAAGACATTGTGCCAAAAGGTAAGTTGGAGGTTCTTTTTGAGAAATCGC
TCGGTAATCAGAAGGCTGAAGAAAAAATTTTATATACTTCACTCACAACAAGCAATAAAGCTATAAGTTTATATTATTAT
GAGTCACAAAACAGCAAAGAAGAGTATTTTAATAAAGAGGGGGTAAGCTTGAAGAGTAGCGAAATTTTTGTAAGTCCTTT
AAACGGAGATTTTCGTATATCCTCGAATTTTGGTAATAGAAAGCATCCCATTCATGGTAAAATTGCTTTTCATAAAGGAG
TAGATTATGCAGCTAAACTTGGCACTCCTATACACGCCACTGCAGAAGGTGTAATAGAATATATAGGAAAGAATGGTGGC
TATGGGAATTACATCAAAATAAAGCACAACAATAAATATTCAACTTGTTACGCACATATAAGCAAATTTAGTAGCGATGT
AAAGTTAGGCTCTAAAGTAAAGCAGGGACAAATCATTGCTTATGTTGGCAGCACTGGTGTTGCAACAGGACCTCATTTAC
ATTATGAAGTTATATATAATGGTAAACATATTGATCCGCTTACGATAGCTCATGGCAATGAGATAAAGTTGCCTGATTGT
GAATTAAGAGAGTTTAAATTATTTGTAAGTAAGGTAGATGAAATAATCAGCAGAGAGGGTGCAAGTGAAAAAGCAATCTG
A

Upstream 100 bases:

>100_bases
ACAAAGAATTAATTGATAAATTATCTATATTAGTTGAAGAGCTAGAAGATAATGATGATGTGCAGTATGTTGAAGGTAAT
TTTATTTTTGCTGATAAACT

Downstream 100 bases:

>100_bases
TGAAAACAGTACAGATAAAAATACAATAAATGATAGAAATCTAAGTAAAATTCAGGCTTTTCCTGTACTAATAGCGCTAG
GGTTAATTTTATTGGTACTT

Product: M23 peptidase domain protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 346; Mature: 346

Protein sequence:

>346_residues
MRLVIFLLLCILPAYATETFAQKDYCHSSAQTLEIDCKQHAIQHFRLKNWSSTGMTLTHSPVLFQDGIRKKKSTESDRKL
LFISSDIKSSFFDAEGLAPDTIMRLIGIYKDYGVDFKKDIVPKGKLEVLFEKSLGNQKAEEKILYTSLTTSNKAISLYYY
ESQNSKEEYFNKEGVSLKSSEIFVSPLNGDFRISSNFGNRKHPIHGKIAFHKGVDYAAKLGTPIHATAEGVIEYIGKNGG
YGNYIKIKHNNKYSTCYAHISKFSSDVKLGSKVKQGQIIAYVGSTGVATGPHLHYEVIYNGKHIDPLTIAHGNEIKLPDC
ELREFKLFVSKVDEIISREGASEKAI

Sequences:

>Translated_346_residues
MRLVIFLLLCILPAYATETFAQKDYCHSSAQTLEIDCKQHAIQHFRLKNWSSTGMTLTHSPVLFQDGIRKKKSTESDRKL
LFISSDIKSSFFDAEGLAPDTIMRLIGIYKDYGVDFKKDIVPKGKLEVLFEKSLGNQKAEEKILYTSLTTSNKAISLYYY
ESQNSKEEYFNKEGVSLKSSEIFVSPLNGDFRISSNFGNRKHPIHGKIAFHKGVDYAAKLGTPIHATAEGVIEYIGKNGG
YGNYIKIKHNNKYSTCYAHISKFSSDVKLGSKVKQGQIIAYVGSTGVATGPHLHYEVIYNGKHIDPLTIAHGNEIKLPDC
ELREFKLFVSKVDEIISREGASEKAI
>Mature_346_residues
MRLVIFLLLCILPAYATETFAQKDYCHSSAQTLEIDCKQHAIQHFRLKNWSSTGMTLTHSPVLFQDGIRKKKSTESDRKL
LFISSDIKSSFFDAEGLAPDTIMRLIGIYKDYGVDFKKDIVPKGKLEVLFEKSLGNQKAEEKILYTSLTTSNKAISLYYY
ESQNSKEEYFNKEGVSLKSSEIFVSPLNGDFRISSNFGNRKHPIHGKIAFHKGVDYAAKLGTPIHATAEGVIEYIGKNGG
YGNYIKIKHNNKYSTCYAHISKFSSDVKLGSKVKQGQIIAYVGSTGVATGPHLHYEVIYNGKHIDPLTIAHGNEIKLPDC
ELREFKLFVSKVDEIISREGASEKAI

Specific function: Could Be Involved In Cell Wall Degradation Or Formation. [C]

COG id: COG0739

COG function: function code M; Membrane proteins related to metalloendopeptidases

Gene ontology:

Cell location: Cell membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase M23B family [H]

Homologues:

Organism=Escherichia coli, GI87081989, Length=228, Percent_Identity=34.2105263157895, Blast_Score=125, Evalue=3e-30,
Organism=Escherichia coli, GI87082174, Length=101, Percent_Identity=44.5544554455446, Blast_Score=74, Evalue=2e-14,
Organism=Escherichia coli, GI1789099, Length=116, Percent_Identity=40.5172413793103, Blast_Score=74, Evalue=2e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011055
- InterPro:   IPR007340
- InterPro:   IPR016047
- InterPro:   IPR002886 [H]

Pfam domain/function: PF04225 OapA; PF01551 Peptidase_M23 [H]

EC number: 3.4.24.- [C]

Molecular weight: Translated: 38811; Mature: 38811

Theoretical pI: Translated: 9.22; Mature: 9.22

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRLVIFLLLCILPAYATETFAQKDYCHSSAQTLEIDCKQHAIQHFRLKNWSSTGMTLTHS
CHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEHHHHHHHHHHHCCCCCCCCEEEECC
PVLFQDGIRKKKSTESDRKLLFISSDIKSSFFDAEGLAPDTIMRLIGIYKDYGVDFKKDI
CCHHHHHCCHHCCCCCCCEEEEEECCHHHHHCCCCCCCHHHHHHHHHHHHHCCCCHHHHC
VPKGKLEVLFEKSLGNQKAEEKILYTSLTTSNKAISLYYYESQNSKEEYFNKEGVSLKSS
CCCCCEEEEEEHHCCCCCHHCEEEEEEEECCCCEEEEEEEECCCCHHHHHCCCCCCEECC
EIFVSPLNGDFRISSNFGNRKHPIHGKIAFHKGVDYAAKLGTPIHATAEGVIEYIGKNGG
EEEEEECCCCEEEECCCCCCCCCCCEEEEEECCCCHHHHCCCCCHHHHHHHHHHHCCCCC
YGNYIKIKHNNKYSTCYAHISKFSSDVKLGSKVKQGQIIAYVGSTGVATGPHLHYEVIYN
CCCEEEEEECCCHHHHHHHHHHHHCCHHHCCCCCCCEEEEEECCCCCCCCCCEEEEEEEC
GKHIDPLTIAHGNEIKLPDCELREFKLFVSKVDEIISREGASEKAI
CCCCCEEEEECCCEECCCCCHHHHHHHHHHHHHHHHHCCCCCCCCC
>Mature Secondary Structure
MRLVIFLLLCILPAYATETFAQKDYCHSSAQTLEIDCKQHAIQHFRLKNWSSTGMTLTHS
CHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEHHHHHHHHHHHCCCCCCCCEEEECC
PVLFQDGIRKKKSTESDRKLLFISSDIKSSFFDAEGLAPDTIMRLIGIYKDYGVDFKKDI
CCHHHHHCCHHCCCCCCCEEEEEECCHHHHHCCCCCCCHHHHHHHHHHHHHCCCCHHHHC
VPKGKLEVLFEKSLGNQKAEEKILYTSLTTSNKAISLYYYESQNSKEEYFNKEGVSLKSS
CCCCCEEEEEEHHCCCCCHHCEEEEEEEECCCCEEEEEEEECCCCHHHHHCCCCCCEECC
EIFVSPLNGDFRISSNFGNRKHPIHGKIAFHKGVDYAAKLGTPIHATAEGVIEYIGKNGG
EEEEEECCCCEEEECCCCCCCCCCCEEEEEECCCCHHHHCCCCCHHHHHHHHHHHCCCCC
YGNYIKIKHNNKYSTCYAHISKFSSDVKLGSKVKQGQIIAYVGSTGVATGPHLHYEVIYN
CCCEEEEEECCCHHHHHHHHHHHHCCHHHCCCCCCCEEEEEECCCCCCCCCCEEEEEEEC
GKHIDPLTIAHGNEIKLPDCELREFKLFVSKVDEIISREGASEKAI
CCCCCEEEEECCCEECCCCCHHHHHHHHHHHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]