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The map label for this gene is yfiO [C]

Identifier: 190571590

GI number: 190571590

Start: 1287129

End: 1287815

Strand: Direct

Name: yfiO [C]

Synonym: WPa_1213

Alternate gene names: 190571590

Gene position: 1287129-1287815 (Clockwise)

Preceding gene: 190571589

Following gene: 190571591

Centisome position: 86.82

GC content: 30.86

Gene sequence:

>687_bases
ATGTATAAGACTTTAATCATATGCTTTTTTCTTCTGACTTGCCCCTTCACGCAGTTATATGCGAATGATCTTGAACACAC
TGAAACTGAACTATATGAGGAGGCAGTTAAGCTTTATGATCAGAAAAAATATAAGCAAGCTATTAGAGCATTTCAAAAGA
TAGAGGATTTGTATCCTTTATCTTATTGGGCAATGAAAGCAAAATTATTATCTGGAGTTTCTTACTATAATATGGGTAAC
TACAGCAGTGCTGCAAGTGATATGGATGATTATATATACGTTTATCCAAATGGTGAAGATTTGCCATATGTATATTACTT
AAGAGTATTATCTTATTACATGCAAATTAATAAAGTGCAGCTTGGGCAACAAATTGCATATAAAACTTTAGAGCTAGCTA
CTGAATATATTAATCTTTTTCCGAATAGCGAATATATAGAAGAGATCAAAGAAAAAGAAAAATTAATCACAGAACATATA
TCAAAAAAAGAGTATTCTATTGGTGAATTTTACCTAAAGCGTGGTGAATATTTAGCAGCAATTAAGCGTTTTCAAGATAT
GATAAGCAATAAAGATTCTAAATATTCTTCTAGAGTTATTAGTTATTTAATAACAGCTCACTTAGCTCTTGGCCTTGACT
TAGAAGCTGAGCAGTATGAAAATATGTTAGTAGAAGGGGTGAATTAG

Upstream 100 bases:

>100_bases
AATGGTGGCCAAGAGACGCTTTTCGTTCGATGATAATGCCAAAAATTTGTTTATTTAGGTAATATTTAGTCTATACTTTA
TTTTGATCAAAAAAAATCTT

Downstream 100 bases:

>100_bases
TTTTCTTATGGCTGGTCATTCACAGTTTTCAAATATAAAACATCGAAAAGGTGCTCAGGATGCAAAGCGCTCGCAAAAAT
TTACGAAGCTCATTAGGGAA

Product: competence lipoprotein ComL, putative

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 228; Mature: 228

Protein sequence:

>228_residues
MYKTLIICFFLLTCPFTQLYANDLEHTETELYEEAVKLYDQKKYKQAIRAFQKIEDLYPLSYWAMKAKLLSGVSYYNMGN
YSSAASDMDDYIYVYPNGEDLPYVYYLRVLSYYMQINKVQLGQQIAYKTLELATEYINLFPNSEYIEEIKEKEKLITEHI
SKKEYSIGEFYLKRGEYLAAIKRFQDMISNKDSKYSSRVISYLITAHLALGLDLEAEQYENMLVEGVN

Sequences:

>Translated_228_residues
MYKTLIICFFLLTCPFTQLYANDLEHTETELYEEAVKLYDQKKYKQAIRAFQKIEDLYPLSYWAMKAKLLSGVSYYNMGN
YSSAASDMDDYIYVYPNGEDLPYVYYLRVLSYYMQINKVQLGQQIAYKTLELATEYINLFPNSEYIEEIKEKEKLITEHI
SKKEYSIGEFYLKRGEYLAAIKRFQDMISNKDSKYSSRVISYLITAHLALGLDLEAEQYENMLVEGVN
>Mature_228_residues
MYKTLIICFFLLTCPFTQLYANDLEHTETELYEEAVKLYDQKKYKQAIRAFQKIEDLYPLSYWAMKAKLLSGVSYYNMGN
YSSAASDMDDYIYVYPNGEDLPYVYYLRVLSYYMQINKVQLGQQIAYKTLELATEYINLFPNSEYIEEIKEKEKLITEHI
SKKEYSIGEFYLKRGEYLAAIKRFQDMISNKDSKYSSRVISYLITAHLALGLDLEAEQYENMLVEGVN

Specific function: Unknown

COG id: COG4105

COG function: function code R; DNA uptake lipoprotein

Gene ontology:

Cell location: Cell membrane; Lipid-anchor (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 3 TPR repeats [H]

Homologues:

Organism=Escherichia coli, GI1788947, Length=229, Percent_Identity=19.6506550218341, Blast_Score=73, Evalue=2e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017689
- InterPro:   IPR013026
- InterPro:   IPR011990 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 26902; Mature: 26902

Theoretical pI: Translated: 4.78; Mature: 4.78

Prosite motif: PS50293 TPR_REGION

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYKTLIICFFLLTCPFTQLYANDLEHTETELYEEAVKLYDQKKYKQAIRAFQKIEDLYPL
CHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCH
SYWAMKAKLLSGVSYYNMGNYSSAASDMDDYIYVYPNGEDLPYVYYLRVLSYYMQINKVQ
HHHHHHHHHHHCCHHHCCCCCCHHHCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHH
LGQQIAYKTLELATEYINLFPNSEYIEEIKEKEKLITEHISKKEYSIGEFYLKRGEYLAA
HHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH
IKRFQDMISNKDSKYSSRVISYLITAHLALGLDLEAEQYENMLVEGVN
HHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCC
>Mature Secondary Structure
MYKTLIICFFLLTCPFTQLYANDLEHTETELYEEAVKLYDQKKYKQAIRAFQKIEDLYPL
CHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCH
SYWAMKAKLLSGVSYYNMGNYSSAASDMDDYIYVYPNGEDLPYVYYLRVLSYYMQINKVQ
HHHHHHHHHHHCCHHHCCCCCCHHHCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHH
LGQQIAYKTLELATEYINLFPNSEYIEEIKEKEKLITEHISKKEYSIGEFYLKRGEYLAA
HHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH
IKRFQDMISNKDSKYSSRVISYLITAHLALGLDLEAEQYENMLVEGVN
HHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11214968 [H]