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The map label for this gene is ccl2 [H]

Identifier: 190570634

GI number: 190570634

Start: 185766

End: 186167

Strand: Reverse

Name: ccl2 [H]

Synonym: WPa_0176

Alternate gene names: 190570634

Gene position: 186167-185766 (Counterclockwise)

Preceding gene: 190570635

Following gene: 190570632

Centisome position: 12.56

GC content: 31.59

Gene sequence:

>402_bases
ATGAGAATAGTAATTAGCTTACTTTTTACATTGATATTCCATTTAAGCATAAATGCTTTTACTTTGGATGATAAACTAAG
AGACGAAAGCATGGAAGAGCGAGCAAGTAGCTTATTTGCAGTAATAAAGTGTCCAGTATGCTCTGGTGAATTATTATCCG
AATCTGAGTCTCAAGTTGCATATGGTGTGCGTAAGACAATTCGCAAGAAGATCAGTGATGGATATACTAACGAGCAAATA
GTTTCAGAGTTAAAAAATTCTTATGGAGATTCAATTATCATTGTACCACCTGTAAAATCTAGTACCTACATTTTATGGTT
TACTCCTTTTATAATTCTTCTTATTGGATGTTTTCTAGTACGAAAATCAGTTCAGAAAATAGATAAAGTAGTAAAAAGAT
AA

Upstream 100 bases:

>100_bases
AATAACGACATTCAATTTTCAATAAAGTACGACAATAATGTAGGTTCAGGCTTTATTGGAAAATTATCCACTACTGATTT
TATCACTCAATTCACCAAGA

Downstream 100 bases:

>100_bases
CTATAGAGTAAAAGTGAGTTTACAACAAATGCAAGTAGCTACTATACGAACATTTGAGTTTAGATCAAAGATTGTAAGGT
TAAATCTTCCATCCAAATAA

Product: Putative cytochrome c-type biogenesis protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 133; Mature: 133

Protein sequence:

>133_residues
MRIVISLLFTLIFHLSINAFTLDDKLRDESMEERASSLFAVIKCPVCSGELLSESESQVAYGVRKTIRKKISDGYTNEQI
VSELKNSYGDSIIIVPPVKSSTYILWFTPFIILLIGCFLVRKSVQKIDKVVKR

Sequences:

>Translated_133_residues
MRIVISLLFTLIFHLSINAFTLDDKLRDESMEERASSLFAVIKCPVCSGELLSESESQVAYGVRKTIRKKISDGYTNEQI
VSELKNSYGDSIIIVPPVKSSTYILWFTPFIILLIGCFLVRKSVQKIDKVVKR
>Mature_133_residues
MRIVISLLFTLIFHLSINAFTLDDKLRDESMEERASSLFAVIKCPVCSGELLSESESQVAYGVRKTIRKKISDGYTNEQI
VSELKNSYGDSIIIVPPVKSSTYILWFTPFIILLIGCFLVRKSVQKIDKVVKR

Specific function: Required for the biogenesis of c-type cytochromes. Possible subunit of a heme lyase [H]

COG id: COG3088

COG function: function code O; Uncharacterized protein involved in biosynthesis of c-type cytochromes

Gene ontology:

Cell location: Periplasm (Probable) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the CcmH/CycL/Ccl2/NrfF family [H]

Homologues:

Organism=Escherichia coli, GI1788522, Length=116, Percent_Identity=25.8620689655172, Blast_Score=60, Evalue=4e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005616 [H]

Pfam domain/function: PF03918 CcmH [H]

EC number: NA

Molecular weight: Translated: 15092; Mature: 15092

Theoretical pI: Translated: 9.19; Mature: 9.19

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.3 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
2.3 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRIVISLLFTLIFHLSINAFTLDDKLRDESMEERASSLFAVIKCPVCSGELLSESESQVA
CHHHHHHHHHHHHHHHCCCEECCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHCCCHHHHH
YGVRKTIRKKISDGYTNEQIVSELKNSYGDSIIIVPPVKSSTYILWFTPFIILLIGCFLV
HHHHHHHHHHHHCCCCHHHHHHHHHHHHCCEEEEECCCCCCCEEHHHHHHHHHHHHHHHH
RKSVQKIDKVVKR
HHHHHHHHHHHCC
>Mature Secondary Structure
MRIVISLLFTLIFHLSINAFTLDDKLRDESMEERASSLFAVIKCPVCSGELLSESESQVA
CHHHHHHHHHHHHHHHCCCEECCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHCCCHHHHH
YGVRKTIRKKISDGYTNEQIVSELKNSYGDSIIIVPPVKSSTYILWFTPFIILLIGCFLV
HHHHHHHHHHHHCCCCHHHHHHHHHHHHCCEEEEECCCCCCCEEHHHHHHHHHHHHHHHH
RKSVQKIDKVVKR
HHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1310666 [H]