| Definition | Wolbachia endosymbiont of Culex quinquefasciatus Pel, complete genome. |
|---|---|
| Accession | NC_010981 |
| Length | 1,482,455 |
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The map label for this gene is 190570635
Identifier: 190570635
GI number: 190570635
Start: 186151
End: 187164
Strand: Reverse
Name: 190570635
Synonym: WPa_0177
Alternate gene names: NA
Gene position: 187164-186151 (Counterclockwise)
Preceding gene: 190570636
Following gene: 190570634
Centisome position: 12.63
GC content: 27.51
Gene sequence:
>1014_bases ATGCGTAAAATTTTTATCTATATTCTTATCTCCTTACCTTTGTTTATTCCTCTAGCTTATAGTGGTTTTTGGTATTTTTC TGCATTTAAGGTAAAAAGTCTTTTAACTGATTACATTAATGACGAAAAAGTTGATATTTCACATGATTTTAAGGGGTTTC CTTTTAACCTAGTTTTTCGTGTAACGAATCCAAAATTTTCTAATGAGCAATTAACTGTTTCATCTGAAGCTTTAATGATA AAAAACAGATTATTTGATAAGTCAGTATATATCTATATACCAAGCAATAAAGTAAACATTGCTGTCCGTAGTGATGAGAA AAAGAATATAAAGTGTCACACACACGTGAGTAGCCACTTTGTTGTTAAACTAAATGATTTACTATCTTCATTAAAATTCA ACAGAAATAGCACTGTAATAGACTATATAGATACATTTCGTTACGAAGATTATGGATTAAAATGTGATGTTTTAGAAAAT CAGCAAAGTGTTATAACTGAAGTGAATGATAAAAGTAATTACATTCAATTTCACTTTGATAAAGAACTGAATGAAAATAC TAAACTAGAATTTGATTTTTATACTTACCGTTATAAACATACTGCAAGTCCTGAAAATTACCTTAGTGTCGACGCTAAAT TAGATTATGAATTTGTAAACCATATTTCAGCTTCTAAGATTAATTTCAACATAGAAAAATTTTTGATTGAGAGTAATAAC TTTTCTATTGCTGCGAATGGTGGAGTAAGTAATTACAATTTAGTTACATCTTCATTTGAAGATAAAATCAATGTAGCCAT ATCAAATTATAAAGAATTAATTTCGTTTGTGACTAATGATTCAAAGACTGCAGATAAATTGGAAAAATCAATATCTTCCT TATCAGAAAAAATCACTAATAACGACATTCAATTTTCAATAAAGTACGACAATAATGTAGGTTCAGGCTTTATTGGAAAA TTATCCACTACTGATTTTATCACTCAATTCACCAAGAATGAGAATAGTAATTAG
Upstream 100 bases:
>100_bases AGGCTTGGATGCCAAATAAAAATCACAAAAGATATTGACGGTTTGTGCGTAACCGTGCCCAGAGGTACAAGAAATATATC ATTAGATAAATAAGAGGATA
Downstream 100 bases:
>100_bases CTTACTTTTTACATTGATATTCCATTTAAGCATAAATGCTTTTACTTTGGATGATAAACTAAGAGACGAAAGCATGGAAG AGCGAGCAAGTAGCTTATTT
Product: Putative outer membrane protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 337; Mature: 337
Protein sequence:
>337_residues MRKIFIYILISLPLFIPLAYSGFWYFSAFKVKSLLTDYINDEKVDISHDFKGFPFNLVFRVTNPKFSNEQLTVSSEALMI KNRLFDKSVYIYIPSNKVNIAVRSDEKKNIKCHTHVSSHFVVKLNDLLSSLKFNRNSTVIDYIDTFRYEDYGLKCDVLEN QQSVITEVNDKSNYIQFHFDKELNENTKLEFDFYTYRYKHTASPENYLSVDAKLDYEFVNHISASKINFNIEKFLIESNN FSIAANGGVSNYNLVTSSFEDKINVAISNYKELISFVTNDSKTADKLEKSISSLSEKITNNDIQFSIKYDNNVGSGFIGK LSTTDFITQFTKNENSN
Sequences:
>Translated_337_residues MRKIFIYILISLPLFIPLAYSGFWYFSAFKVKSLLTDYINDEKVDISHDFKGFPFNLVFRVTNPKFSNEQLTVSSEALMI KNRLFDKSVYIYIPSNKVNIAVRSDEKKNIKCHTHVSSHFVVKLNDLLSSLKFNRNSTVIDYIDTFRYEDYGLKCDVLEN QQSVITEVNDKSNYIQFHFDKELNENTKLEFDFYTYRYKHTASPENYLSVDAKLDYEFVNHISASKINFNIEKFLIESNN FSIAANGGVSNYNLVTSSFEDKINVAISNYKELISFVTNDSKTADKLEKSISSLSEKITNNDIQFSIKYDNNVGSGFIGK LSTTDFITQFTKNENSN >Mature_337_residues MRKIFIYILISLPLFIPLAYSGFWYFSAFKVKSLLTDYINDEKVDISHDFKGFPFNLVFRVTNPKFSNEQLTVSSEALMI KNRLFDKSVYIYIPSNKVNIAVRSDEKKNIKCHTHVSSHFVVKLNDLLSSLKFNRNSTVIDYIDTFRYEDYGLKCDVLEN QQSVITEVNDKSNYIQFHFDKELNENTKLEFDFYTYRYKHTASPENYLSVDAKLDYEFVNHISASKINFNIEKFLIESNN FSIAANGGVSNYNLVTSSFEDKINVAISNYKELISFVTNDSKTADKLEKSISSLSEKITNNDIQFSIKYDNNVGSGFIGK LSTTDFITQFTKNENSN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 38973; Mature: 38973
Theoretical pI: Translated: 6.64; Mature: 6.64
Prosite motif: PS00362 RIBOSOMAL_S15
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 0.6 %Met (Translated Protein) 1.2 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 1.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRKIFIYILISLPLFIPLAYSGFWYFSAFKVKSLLTDYINDEKVDISHDFKGFPFNLVFR CCEEEEEEEHHHHHHHHHHCCCEEEHHHHHHHHHHHHHCCCCEEEECCCCCCCCEEEEEE VTNPKFSNEQLTVSSEALMIKNRLFDKSVYIYIPSNKVNIAVRSDEKKNIKCHTHVSSHF EECCCCCCCEEEECCCCEEEEHHCCCCEEEEEECCCEEEEEEECCCCCCCEEEEECCCEE VVKLNDLLSSLKFNRNSTVIDYIDTFRYEDYGLKCDVLENQQSVITEVNDKSNYIQFHFD EEEEHHHHHHHCCCCCCEEEEEHHHCEECCCCEEEEEECCCCHHHEEECCCCCEEEEEEC KELNENTKLEFDFYTYRYKHTASPENYLSVDAKLDYEFVNHISASKINFNIEKFLIESNN CCCCCCCEEEEEEEEEEEEECCCCCCEEEEEEEECHHHHCCCCCCEEEEEEEEEEEECCC FSIAANGGVSNYNLVTSSFEDKINVAISNYKELISFVTNDSKTADKLEKSISSLSEKITN EEEEECCCCCCCEEEECCCCCEEEEEHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCC NDIQFSIKYDNNVGSGFIGKLSTTDFITQFTKNENSN CCEEEEEEECCCCCCCEEECCCHHHHHHHHHCCCCCC >Mature Secondary Structure MRKIFIYILISLPLFIPLAYSGFWYFSAFKVKSLLTDYINDEKVDISHDFKGFPFNLVFR CCEEEEEEEHHHHHHHHHHCCCEEEHHHHHHHHHHHHHCCCCEEEECCCCCCCCEEEEEE VTNPKFSNEQLTVSSEALMIKNRLFDKSVYIYIPSNKVNIAVRSDEKKNIKCHTHVSSHF EECCCCCCCEEEECCCCEEEEHHCCCCEEEEEECCCEEEEEEECCCCCCCEEEEECCCEE VVKLNDLLSSLKFNRNSTVIDYIDTFRYEDYGLKCDVLENQQSVITEVNDKSNYIQFHFD EEEEHHHHHHHCCCCCCEEEEEHHHCEECCCCEEEEEECCCCHHHEEECCCCCEEEEEEC KELNENTKLEFDFYTYRYKHTASPENYLSVDAKLDYEFVNHISASKINFNIEKFLIESNN CCCCCCCEEEEEEEEEEEEECCCCCCEEEEEEEECHHHHCCCCCCEEEEEEEEEEEECCC FSIAANGGVSNYNLVTSSFEDKINVAISNYKELISFVTNDSKTADKLEKSISSLSEKITN EEEEECCCCCCCEEEECCCCCEEEEEHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCC NDIQFSIKYDNNVGSGFIGKLSTTDFITQFTKNENSN CCEEEEEEECCCCCCCEEECCCHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA