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The map label for this gene is soxA

Identifier: 189352148

GI number: 189352148

Start: 174849

End: 176021

Strand: Direct

Name: soxA

Synonym: BMULJ_03366

Alternate gene names: NA

Gene position: 174849-176021 (Clockwise)

Preceding gene: 189352147

Following gene: 189352150

Centisome position: 7.07

GC content: 65.98

Gene sequence:

>1173_bases
GTGAGTTCTCAAATCGTCATCGTCGGCGGTGGCGTGATCGGCAGCTCGATCGCCTACTTTCTGCGCGCCACCGATCCGAC
GGTCGCCGTGACCGTCATCGAGCGCGATCCGTCGTACGCGAAGTCGTCGTCGGCGCTGTCGGCCGCCTCGATCCGTCAGC
AGTTTTCGACACCGCTGTCGATCGAGATGTCGCTGTTCGGGATCGAGTTTCTGCGTACGCTCGGCGAGCGGCTCGAAGTG
GACGGCAACCGGCCGTCGATCGATCTGCACGAAGGCGGCTACCTGTTTCTCGCGACGCCGGCCGGCGATGCGACGCTGCG
CGAGAACCATGCGCTGCAGACGCACCTCGGCGCCGATATCCGGCTGATGGACCGCGACGCGTTGCGCGCGAAATTCCCCT
GGCTCAACGTCGACGATCTCGTGTCGGGCGCGTACGGCGCCAGCGGCGAAGGCTGGTTCGACGGCTACGGGCTCGTCCAG
GCGCTGCGCAAGAAGGCGCAGGCGCTCGGCGCGCGCTATGTCGCGTCCGACGTGACTAACGTCGTGCGCGACGGCCGCAG
GATCACGCACGTCGTTACGAAGGACGGCGAGCGCTACGCGTGCGACACGCTGGTCAATGCGGCCGGCGCGTGGACGCGTG
CGCTGTCCGCGATGATGGGGATCGACATCCCCGTGTACGCGCGGCGCCGCAGCATCTTCAACGTATCGTCGCCGGCGAAG
CTTGCCGACTGCCCGCTGCTGATCGATCCGAGCGGCGTGTATTTCCGGCCGGAAGGGCGCACGTATATCTGCGGTACCTC
TCCAAGCGCGGACAACGATCCGGACGATCTGCCGCTCGACGAGGTCGATCACGCGCTGTTCGACGACGTGATCTGGCCGA
CGCTGGCGCATCGCGTGCCCGAGTTCGAGGCGCTGCGCGTCGAGAACTGCTGGTCCGGCTATTACGAATACAACGTCTTC
GATCACAACGCGATCATCGGCTATCACCCTGATCTGGACAACGTCGTGTTCGCGAACGGCTACAGCGGCCATGGCCTGCA
GCAGGGGCCGGCGACCGGCCGCGGCGTCAGCGAACTGATTCTCGGCGGCCGCTATGCGACGCTCGACCTGTCGCCGCTCG
GCTGGTCGCGCGTGCTCGAAAACCGCCCGATCGTCGAAAAGAACGTCGTGTAG

Upstream 100 bases:

>100_bases
ACATGCTGAAATACCGTCGGCGACCGGGCGCGGCCGCGAACTCAACCTCTTTCGGGCGCGGCCGGCCGGCGGCGCCTTTT
ACGTCAAACCGGAGTCAGTC

Downstream 100 bases:

>100_bases
CGCGGCGGGAACGCCCGGTGTGGCGGGCGGGATTCTCCTTGCTTCTACCCATTGGCCCGACTGTGTCGGGCTTTTTTTCT
GTGGGTGCGCGGGGAGTGGG

Product: sarcosine oxidase

Products: NA

Alternate protein names: Sarcosine Oxidase Subunit Beta; Oxidoreductase; Glycine/D-Amino Acid Oxidase; Sarcosine Dehydrogenase; Sarcosine Oxidase Beta Subunit; Glycine/D-Amino Acid Oxidase Deaminating; Glycine Oxidase ThiO; Glycine Cleavage T-Protein; Sarcosine Oxidase Beta Subunit Family Protein; Sarcosine Oxidase; Glycine Cleavage System T Protein; Proline Dehydrogenase Beta Subunit; FAD-Dependent Oxidoreductase Domain-Containing; Fad Dependent Oxidoreductase; Oxidoreductase Protein; Sarcosine Deshydrogenase; Proline Dehydrogenase; Dehydrogenase; Dye-Linked L-Proline Dehydrogenase Beta2 Subunit; Glycine Oxidase; SoxB-Like Sarcosine Oxidase Beta Subunit ; FAD Dependent Oxidoreductase/Aminomethyl Transferase; Sarcosine Oxidase Related Protein; D-Amino-Acid Dehydrogenase; Sarcosine Oxidase Subunit Beta Family Protein; Fad-Dependent Oxidoreductase; Sarcosine Dehydrogenase Beta Subunit

Number of amino acids: Translated: 390; Mature: 389

Protein sequence:

>390_residues
MSSQIVIVGGGVIGSSIAYFLRATDPTVAVTVIERDPSYAKSSSALSAASIRQQFSTPLSIEMSLFGIEFLRTLGERLEV
DGNRPSIDLHEGGYLFLATPAGDATLRENHALQTHLGADIRLMDRDALRAKFPWLNVDDLVSGAYGASGEGWFDGYGLVQ
ALRKKAQALGARYVASDVTNVVRDGRRITHVVTKDGERYACDTLVNAAGAWTRALSAMMGIDIPVYARRRSIFNVSSPAK
LADCPLLIDPSGVYFRPEGRTYICGTSPSADNDPDDLPLDEVDHALFDDVIWPTLAHRVPEFEALRVENCWSGYYEYNVF
DHNAIIGYHPDLDNVVFANGYSGHGLQQGPATGRGVSELILGGRYATLDLSPLGWSRVLENRPIVEKNVV

Sequences:

>Translated_390_residues
MSSQIVIVGGGVIGSSIAYFLRATDPTVAVTVIERDPSYAKSSSALSAASIRQQFSTPLSIEMSLFGIEFLRTLGERLEV
DGNRPSIDLHEGGYLFLATPAGDATLRENHALQTHLGADIRLMDRDALRAKFPWLNVDDLVSGAYGASGEGWFDGYGLVQ
ALRKKAQALGARYVASDVTNVVRDGRRITHVVTKDGERYACDTLVNAAGAWTRALSAMMGIDIPVYARRRSIFNVSSPAK
LADCPLLIDPSGVYFRPEGRTYICGTSPSADNDPDDLPLDEVDHALFDDVIWPTLAHRVPEFEALRVENCWSGYYEYNVF
DHNAIIGYHPDLDNVVFANGYSGHGLQQGPATGRGVSELILGGRYATLDLSPLGWSRVLENRPIVEKNVV
>Mature_389_residues
SSQIVIVGGGVIGSSIAYFLRATDPTVAVTVIERDPSYAKSSSALSAASIRQQFSTPLSIEMSLFGIEFLRTLGERLEVD
GNRPSIDLHEGGYLFLATPAGDATLRENHALQTHLGADIRLMDRDALRAKFPWLNVDDLVSGAYGASGEGWFDGYGLVQA
LRKKAQALGARYVASDVTNVVRDGRRITHVVTKDGERYACDTLVNAAGAWTRALSAMMGIDIPVYARRRSIFNVSSPAKL
ADCPLLIDPSGVYFRPEGRTYICGTSPSADNDPDDLPLDEVDHALFDDVIWPTLAHRVPEFEALRVENCWSGYYEYNVFD
HNAIIGYHPDLDNVVFANGYSGHGLQQGPATGRGVSELILGGRYATLDLSPLGWSRVLENRPIVEKNVV

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Homo sapiens, GI8923708, Length=412, Percent_Identity=39.3203883495146, Blast_Score=297, Evalue=1e-80,
Organism=Homo sapiens, GI197927446, Length=376, Percent_Identity=22.3404255319149, Blast_Score=73, Evalue=5e-13,
Organism=Homo sapiens, GI21361378, Length=376, Percent_Identity=22.3404255319149, Blast_Score=73, Evalue=5e-13,
Organism=Homo sapiens, GI24797151, Length=392, Percent_Identity=25.2551020408163, Blast_Score=67, Evalue=2e-11,
Organism=Caenorhabditis elegans, GI17541536, Length=431, Percent_Identity=33.6426914153132, Blast_Score=229, Evalue=2e-60,
Organism=Drosophila melanogaster, GI20129729, Length=418, Percent_Identity=39.4736842105263, Blast_Score=280, Evalue=1e-75,
Organism=Drosophila melanogaster, GI17985989, Length=396, Percent_Identity=32.3232323232323, Blast_Score=216, Evalue=3e-56,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 42523; Mature: 42392

Theoretical pI: Translated: 5.00; Mature: 5.00

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSSQIVIVGGGVIGSSIAYFLRATDPTVAVTVIERDPSYAKSSSALSAASIRQQFSTPLS
CCCCEEEEECCHHHHHHEEEEEECCCEEEEEEEECCCCCCCCCHHHHHHHHHHHHCCCCE
IEMSLFGIEFLRTLGERLEVDGNRPSIDLHEGGYLFLATPAGDATLRENHALQTHLGADI
EEHHHHHHHHHHHHHHHEECCCCCCEEEEECCCEEEEECCCCCCCHHCCCCEEHHCCCCE
RLMDRDALRAKFPWLNVDDLVSGAYGASGEGWFDGYGLVQALRKKAQALGARYVASDVTN
EEECCHHHHHCCCCCCHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
VVRDGRRITHVVTKDGERYACDTLVNAAGAWTRALSAMMGIDIPVYARRRSIFNVSSPAK
HHHCCCEEEEEEECCCCEEEHHHHHHHHHHHHHHHHHHHCCCCCHHHHHCCEECCCCCCH
LADCPLLIDPSGVYFRPEGRTYICGTSPSADNDPDDLPLDEVDHALFDDVIWPTLAHRVP
HCCCCEEECCCCCEECCCCCEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCC
EFEALRVENCWSGYYEYNVFDHNAIIGYHPDLDNVVFANGYSGHGLQQGPATGRGVSELI
CCCEEEHHHHHCCEEEEEEEECCEEEEECCCCCCEEEECCCCCCCCCCCCCCCCCHHHHH
LGGRYATLDLSPLGWSRVLENRPIVEKNVV
HCCEEEEEECCCCCHHHHHCCCCCCCCCCC
>Mature Secondary Structure 
SSQIVIVGGGVIGSSIAYFLRATDPTVAVTVIERDPSYAKSSSALSAASIRQQFSTPLS
CCCEEEEECCHHHHHHEEEEEECCCEEEEEEEECCCCCCCCCHHHHHHHHHHHHCCCCE
IEMSLFGIEFLRTLGERLEVDGNRPSIDLHEGGYLFLATPAGDATLRENHALQTHLGADI
EEHHHHHHHHHHHHHHHEECCCCCCEEEEECCCEEEEECCCCCCCHHCCCCEEHHCCCCE
RLMDRDALRAKFPWLNVDDLVSGAYGASGEGWFDGYGLVQALRKKAQALGARYVASDVTN
EEECCHHHHHCCCCCCHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
VVRDGRRITHVVTKDGERYACDTLVNAAGAWTRALSAMMGIDIPVYARRRSIFNVSSPAK
HHHCCCEEEEEEECCCCEEEHHHHHHHHHHHHHHHHHHHCCCCCHHHHHCCEECCCCCCH
LADCPLLIDPSGVYFRPEGRTYICGTSPSADNDPDDLPLDEVDHALFDDVIWPTLAHRVP
HCCCCEEECCCCCEECCCCCEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCC
EFEALRVENCWSGYYEYNVFDHNAIIGYHPDLDNVVFANGYSGHGLQQGPATGRGVSELI
CCCEEEHHHHHCCEEEEEEEECCEEEEECCCCCCEEEECCCCCCCCCCCCCCCCCHHHHH
LGGRYATLDLSPLGWSRVLENRPIVEKNVV
HCCEEEEEECCCCCHHHHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA