Definition | Orientia tsutsugamushi str. Ikeda, complete genome. |
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Accession | NC_010793 |
Length | 2,008,987 |
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The map label for this gene is 189184637
Identifier: 189184637
GI number: 189184637
Start: 1751181
End: 1751648
Strand: Reverse
Name: 189184637
Synonym: OTT_1730
Alternate gene names: NA
Gene position: 1751648-1751181 (Counterclockwise)
Preceding gene: 189184638
Following gene: 189184636
Centisome position: 87.19
GC content: 30.77
Gene sequence:
>468_bases TTGCTGAACAATGGAGCTAATGTAAACGCAAAAAATAATGATGGTTACACTGCTTTACATCTTGTTGTTGACACAATTCA AGTATATTATGAATTTTTCGAAAAATATCCTGTCTATTGCAATGATCATATAGCATTACTGCTAAAATATAATGCTGATG TAAATATCGAGAATAATCAAGGTAATACACCTTTATCTGATGCTGTTGAATGCAAATGTGTAGAACCTTTAGCAATTATG CTAAAACATAATTCTACTGGTATTAATAAAAAATATGATGAAGGAGAAACACTACTACATATTGCTATTCGTAATAAAAT CATAGATATTATACAGCTTTTGATTGATTATGGAGCAGATATTGATGCAAAAGATGATAACGGCATGACTACTATAGATT ATGCTGCTAAAAGCGGTAATGCAGATATATTCAACTTTCTAACGGAACAATGGGTCCCATGGTATTAG
Upstream 100 bases:
>100_bases TATTAATAAGGATAGTACACTTGTCAATTCAAAATATAAAGACGGTACTACAGCTTTATCTGTTGCTTTGAAATATAAGA ATCTACCTATTGCTAAGATT
Downstream 100 bases:
>100_bases GTTTCAACAGATAGCTAATATGTTAATGCTAATAAAGAGAAGTTAATATGAATGTTTTGAAATCAATTTTACAACCGTGT TATGCTGTTATATTAGCATT
Product: ankyrin repeat-containing protein 03_14
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 155; Mature: 155
Protein sequence:
>155_residues MLNNGANVNAKNNDGYTALHLVVDTIQVYYEFFEKYPVYCNDHIALLLKYNADVNIENNQGNTPLSDAVECKCVEPLAIM LKHNSTGINKKYDEGETLLHIAIRNKIIDIIQLLIDYGADIDAKDDNGMTTIDYAAKSGNADIFNFLTEQWVPWY
Sequences:
>Translated_155_residues MLNNGANVNAKNNDGYTALHLVVDTIQVYYEFFEKYPVYCNDHIALLLKYNADVNIENNQGNTPLSDAVECKCVEPLAIM LKHNSTGINKKYDEGETLLHIAIRNKIIDIIQLLIDYGADIDAKDDNGMTTIDYAAKSGNADIFNFLTEQWVPWY >Mature_155_residues MLNNGANVNAKNNDGYTALHLVVDTIQVYYEFFEKYPVYCNDHIALLLKYNADVNIENNQGNTPLSDAVECKCVEPLAIM LKHNSTGINKKYDEGETLLHIAIRNKIIDIIQLLIDYGADIDAKDDNGMTTIDYAAKSGNADIFNFLTEQWVPWY
Specific function: Unknown
COG id: COG0666
COG function: function code R; FOG: Ankyrin repeat
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 18 ANK repeats [H]
Homologues:
Organism=Homo sapiens, GI268607595, Length=146, Percent_Identity=32.1917808219178, Blast_Score=74, Evalue=4e-14, Organism=Homo sapiens, GI62988328, Length=146, Percent_Identity=32.1917808219178, Blast_Score=74, Evalue=4e-14, Organism=Homo sapiens, GI18252778, Length=170, Percent_Identity=27.6470588235294, Blast_Score=66, Evalue=1e-11, Organism=Homo sapiens, GI32967601, Length=149, Percent_Identity=30.2013422818792, Blast_Score=65, Evalue=2e-11, Organism=Homo sapiens, GI52426737, Length=150, Percent_Identity=29.3333333333333, Blast_Score=63, Evalue=9e-11, Organism=Homo sapiens, GI52426735, Length=150, Percent_Identity=29.3333333333333, Blast_Score=63, Evalue=9e-11, Organism=Homo sapiens, GI188595682, Length=150, Percent_Identity=29.3333333333333, Blast_Score=63, Evalue=9e-11, Organism=Drosophila melanogaster, GI281364453, Length=151, Percent_Identity=31.7880794701987, Blast_Score=69, Evalue=9e-13, Organism=Drosophila melanogaster, GI24581842, Length=151, Percent_Identity=31.7880794701987, Blast_Score=69, Evalue=9e-13, Organism=Drosophila melanogaster, GI281359521, Length=149, Percent_Identity=29.5302013422819, Blast_Score=67, Evalue=6e-12, Organism=Drosophila melanogaster, GI281359519, Length=149, Percent_Identity=29.5302013422819, Blast_Score=67, Evalue=6e-12, Organism=Drosophila melanogaster, GI28558752, Length=149, Percent_Identity=29.5302013422819, Blast_Score=67, Evalue=6e-12, Organism=Drosophila melanogaster, GI28558750, Length=149, Percent_Identity=29.5302013422819, Blast_Score=67, Evalue=6e-12, Organism=Drosophila melanogaster, GI28558756, Length=149, Percent_Identity=29.5302013422819, Blast_Score=67, Evalue=6e-12, Organism=Drosophila melanogaster, GI28558754, Length=149, Percent_Identity=29.5302013422819, Blast_Score=67, Evalue=6e-12, Organism=Drosophila melanogaster, GI161082085, Length=153, Percent_Identity=31.3725490196078, Blast_Score=66, Evalue=7e-12, Organism=Drosophila melanogaster, GI161082106, Length=153, Percent_Identity=31.3725490196078, Blast_Score=66, Evalue=7e-12, Organism=Drosophila melanogaster, GI161082096, Length=153, Percent_Identity=31.3725490196078, Blast_Score=66, Evalue=7e-12, Organism=Drosophila melanogaster, GI161082081, Length=153, Percent_Identity=31.3725490196078, Blast_Score=66, Evalue=7e-12, Organism=Drosophila melanogaster, GI161082110, Length=153, Percent_Identity=31.3725490196078, Blast_Score=66, Evalue=7e-12, Organism=Drosophila melanogaster, GI161082099, Length=153, Percent_Identity=31.3725490196078, Blast_Score=66, Evalue=7e-12, Organism=Drosophila melanogaster, GI161082089, Length=153, Percent_Identity=31.3725490196078, Blast_Score=66, Evalue=1e-11, Organism=Drosophila melanogaster, GI24639454, Length=148, Percent_Identity=31.7567567567568, Blast_Score=65, Evalue=2e-11, Organism=Drosophila melanogaster, GI161082092, Length=150, Percent_Identity=28, Blast_Score=64, Evalue=3e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002110 - InterPro: IPR020683 - InterPro: IPR007685 [H]
Pfam domain/function: PF00023 Ank; PF04607 RelA_SpoT [H]
EC number: NA
Molecular weight: Translated: 17524; Mature: 17524
Theoretical pI: Translated: 4.32; Mature: 4.32
Prosite motif: PS50088 ANK_REPEAT ; PS50297 ANK_REP_REGION
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLNNGANVNAKNNDGYTALHLVVDTIQVYYEFFEKYPVYCNDHIALLLKYNADVNIENNQ CCCCCCCCCCCCCCCEEHHHHHHHHHHHHHHHHHCCCCEECCCEEEEEEECCCEEEECCC GNTPLSDAVECKCVEPLAIMLKHNSTGINKKYDEGETLLHIAIRNKIIDIIQLLIDYGAD CCCCCCCCCEEEECCCEEEEEECCCCCCCCCCCCCCEEEEHHHHHHHHHHHHHHHHCCCC IDAKDDNGMTTIDYAAKSGNADIFNFLTEQWVPWY CCCCCCCCCEEEEECCCCCCCHHHHHHHHHCCCCC >Mature Secondary Structure MLNNGANVNAKNNDGYTALHLVVDTIQVYYEFFEKYPVYCNDHIALLLKYNADVNIENNQ CCCCCCCCCCCCCCCEEHHHHHHHHHHHHHHHHHCCCCEECCCEEEEEEECCCEEEECCC GNTPLSDAVECKCVEPLAIMLKHNSTGINKKYDEGETLLHIAIRNKIIDIIQLLIDYGAD CCCCCCCCCEEEECCCEEEEEECCCCCCCCCCCCCCEEEEHHHHHHHHHHHHHHHHCCCC IDAKDDNGMTTIDYAAKSGNADIFNFLTEQWVPWY CCCCCCCCCEEEEECCCCCCCHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA