Definition | Orientia tsutsugamushi str. Ikeda, complete genome. |
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Accession | NC_010793 |
Length | 2,008,987 |
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The map label for this gene is 189184631
Identifier: 189184631
GI number: 189184631
Start: 1746029
End: 1746991
Strand: Reverse
Name: 189184631
Synonym: OTT_1724
Alternate gene names: NA
Gene position: 1746991-1746029 (Counterclockwise)
Preceding gene: 189184632
Following gene: 189184606
Centisome position: 86.96
GC content: 30.63
Gene sequence:
>963_bases ATGCATTTATCAAGATTTTTAGATCCAAAGAATGATGTAGCATTTAAAAAGATATTTGGATCAGAAAAAAACAAGGACAT ACTAATACATTTTCTGAACGATATATTGTTGTTTGAAGGGAATAGAGAAATAACAGAAGTAGAGTTTTTAGGAACGATAT TAGATGCAGACATAGCGTCTAAAAAAGAATCAATAGTAGATGTTTTGTGTAAAGATAAAAACGGTGCGCAATATATAATA GAAATGCAAGTAGATCCTACACAAGGATTTGAAAAAAGAGCCCAGTATTATGCAGCAAAGGCATATGGCAGGCAACCAAA TAGAGGAAAAGAAGGAAAATACTCAGACCTAAAGGAAGTTATATTTATAGCTATAGCAGATTATAAATTGTTTCCAAACA AAGAAGACTATATATCAAGGCATGTAATATTGGATAAAAAGACATATGAGCATGATCTAAAAGACTTTTCATTTACCTTT ATAGAATTACCAAAATTTAAAAAAAATAGAGTGGAAGAGTTAAATGATATAACAGAGAAGTGGTGCTATTTTTTTAAACA TGCAAAAGAAACAACATTAGATGGATATAATAAAATAATAGGTGAAGATTTAATAATAAAAAGAGCGTATGAGGCATTAG ATCAGTTTAACTGGAGCGAAGACGAACTAATAACCTACGAACAAGAGTTAAAGCGTATATGGGATAATAAAGCAGTAGAA GATTATAAACTCGAACGCGCTAAAGCTGAAGGCAAAGCCGAAGGTAAAGCTGAAGGAATAAAGCTCGGTGAGGCTAAAGG TAAAGCTGAAGGTAAAGCTGAAGGTAAAGCTGAAGGTAAAGCTGAAGCAAAAAAAGATTTTGCAATAAAATTATTGAAAT CTGAATTATCAGTTGAGACAATTGCTGAATATACGGATTTATCAATACAAGAAGTATTAAATTTAAAAAATAGTGTAAAA TAA
Upstream 100 bases:
>100_bases GTTAATGTAGTGAATTGCAGAAATTAAAATTCAATAAGAGAATGTTCATGTAAGTTATTTTATTGTATAATTTAAAAAGA ATAGAAAATATGAAAAATAT
Downstream 100 bases:
>100_bases TAATATACTTCTTTCGAAACTATAGTCATTTACAATGAAGTTTGCGTATAAAATATCCTGTTGATAAATCTTATGATGCT ATTGTCGCTTTTTTCTATAC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 320; Mature: 320
Protein sequence:
>320_residues MHLSRFLDPKNDVAFKKIFGSEKNKDILIHFLNDILLFEGNREITEVEFLGTILDADIASKKESIVDVLCKDKNGAQYII EMQVDPTQGFEKRAQYYAAKAYGRQPNRGKEGKYSDLKEVIFIAIADYKLFPNKEDYISRHVILDKKTYEHDLKDFSFTF IELPKFKKNRVEELNDITEKWCYFFKHAKETTLDGYNKIIGEDLIIKRAYEALDQFNWSEDELITYEQELKRIWDNKAVE DYKLERAKAEGKAEGKAEGIKLGEAKGKAEGKAEGKAEGKAEAKKDFAIKLLKSELSVETIAEYTDLSIQEVLNLKNSVK
Sequences:
>Translated_320_residues MHLSRFLDPKNDVAFKKIFGSEKNKDILIHFLNDILLFEGNREITEVEFLGTILDADIASKKESIVDVLCKDKNGAQYII EMQVDPTQGFEKRAQYYAAKAYGRQPNRGKEGKYSDLKEVIFIAIADYKLFPNKEDYISRHVILDKKTYEHDLKDFSFTF IELPKFKKNRVEELNDITEKWCYFFKHAKETTLDGYNKIIGEDLIIKRAYEALDQFNWSEDELITYEQELKRIWDNKAVE DYKLERAKAEGKAEGKAEGIKLGEAKGKAEGKAEGKAEGKAEAKKDFAIKLLKSELSVETIAEYTDLSIQEVLNLKNSVK >Mature_320_residues MHLSRFLDPKNDVAFKKIFGSEKNKDILIHFLNDILLFEGNREITEVEFLGTILDADIASKKESIVDVLCKDKNGAQYII EMQVDPTQGFEKRAQYYAAKAYGRQPNRGKEGKYSDLKEVIFIAIADYKLFPNKEDYISRHVILDKKTYEHDLKDFSFTF IELPKFKKNRVEELNDITEKWCYFFKHAKETTLDGYNKIIGEDLIIKRAYEALDQFNWSEDELITYEQELKRIWDNKAVE DYKLERAKAEGKAEGKAEGIKLGEAKGKAEGKAEGKAEGKAEAKKDFAIKLLKSELSVETIAEYTDLSIQEVLNLKNSVK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 36940; Mature: 36940
Theoretical pI: Translated: 5.61; Mature: 5.61
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 0.6 %Met (Translated Protein) 1.2 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 1.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHLSRFLDPKNDVAFKKIFGSEKNKDILIHFLNDILLFEGNREITEVEFLGTILDADIAS CCCHHHCCCCCCHHHHHHHCCCCCCHHHHHHHHHHHEECCCCCHHHHHHHHHHHHHHHHH KKESIVDVLCKDKNGAQYIIEMQVDPTQGFEKRAQYYAAKAYGRQPNRGKEGKYSDLKEV HHHHHHHHHHCCCCCCEEEEEEEECCCCCHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHH IFIAIADYKLFPNKEDYISRHVILDKKTYEHDLKDFSFTFIELPKFKKNRVEELNDITEK HHHEEECCEECCCCHHHHHHHEEECCHHHHHHHHHCCEEEEECCCHHHHHHHHHHHHHHH WCYFFKHAKETTLDGYNKIIGEDLIIKRAYEALDQFNWSEDELITYEQELKRIWDNKAVE HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCHH DYKLERAKAEGKAEGKAEGIKLGEAKGKAEGKAEGKAEGKAEAKKDFAIKLLKSELSVET HHHHHHHHCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH IAEYTDLSIQEVLNLKNSVK HHHHHCCCHHHHHHHHHCCC >Mature Secondary Structure MHLSRFLDPKNDVAFKKIFGSEKNKDILIHFLNDILLFEGNREITEVEFLGTILDADIAS CCCHHHCCCCCCHHHHHHHCCCCCCHHHHHHHHHHHEECCCCCHHHHHHHHHHHHHHHHH KKESIVDVLCKDKNGAQYIIEMQVDPTQGFEKRAQYYAAKAYGRQPNRGKEGKYSDLKEV HHHHHHHHHHCCCCCCEEEEEEEECCCCCHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHH IFIAIADYKLFPNKEDYISRHVILDKKTYEHDLKDFSFTFIELPKFKKNRVEELNDITEK HHHEEECCEECCCCHHHHHHHEEECCHHHHHHHHHCCEEEEECCCHHHHHHHHHHHHHHH WCYFFKHAKETTLDGYNKIIGEDLIIKRAYEALDQFNWSEDELITYEQELKRIWDNKAVE HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCHH DYKLERAKAEGKAEGKAEGIKLGEAKGKAEGKAEGKAEGKAEAKKDFAIKLLKSELSVET HHHHHHHHCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH IAEYTDLSIQEVLNLKNSVK HHHHHCCCHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA