Definition Orientia tsutsugamushi str. Ikeda, complete genome.
Accession NC_010793
Length 2,008,987

Click here to switch to the map view.

The map label for this gene is 189184606

Identifier: 189184606

GI number: 189184606

Start: 1724810

End: 1725481

Strand: Reverse

Name: 189184606

Synonym: OTT_1699

Alternate gene names: NA

Gene position: 1725481-1724810 (Counterclockwise)

Preceding gene: 189184631

Following gene: 189184605

Centisome position: 85.89

GC content: 31.1

Gene sequence:

>672_bases
ATGGCAAAAGCGTTAGCGAATGAATTACGAACTACTGATCAGGCAAATAGAGACAACTGTAAATTTGATAACGAATTTAA
TAAGGAAAAATATCTTACTCAAATTGAAACAAGCGCAAATCTTAGTAAGGAAAGTCAGTTGAAGCATAAAATTGCTGGTT
CTTTTGAAGCAGCTATGGCTTATCAAATTTTGACTTCTTGTAGTTTTGGGCCAGCGGTTCGAACTAGGTTTTTTGTTAAG
TTGCTTAAAAATATCACACTAACAGAATGTGATGAATCAAAGATATTACAAGTTGTACAAGATGTATATGGATACGAAAT
TCAAGAATTACAAGTTAAACCATTTGAGCAACTCAAAACTGTTTCACAGAAACAAATCAATGAAGAAGAGTATCTCTTGA
ATCTCAGTAAACAACTGGGCTCCAACTCAACTTGGTACAAAGTACGAGAATCTTTGATTAAAAGTTACGGTCAAGCTATC
GATAAATCATGGTTTAGCAAATTAGAAGTTATAAATGAAGATAGTGTTAACAAAAAAATATTCATCAAAGCAAAAACAGA
ATTTGAAGATAGTTACATCAGAGAGAACTATCTGAAAGATCTTGAGTCCTCTTTTAAAGCTCAAGGATTTTCTTTTGAGT
TAGTTAAGTTTAGTAATTTTAATAAAATTTAA

Upstream 100 bases:

>100_bases
CAATGTTTTTAACATATACTTTATCAACAAATTACTATTAAAGCTAGCAGATCAATATTCGAATTATCATTTTGGCTGCA
AGGCATCAGTTCTAAACTAT

Downstream 100 bases:

>100_bases
AGGGTGATATGGAAAAAGATCTTGCAAAGATTGCTCCAAGTAATATTCAGGCAGAGCAAATGATACTTGGAGCAATTCTG
ATTAACAATCGTGCGCTATA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 223; Mature: 222

Protein sequence:

>223_residues
MAKALANELRTTDQANRDNCKFDNEFNKEKYLTQIETSANLSKESQLKHKIAGSFEAAMAYQILTSCSFGPAVRTRFFVK
LLKNITLTECDESKILQVVQDVYGYEIQELQVKPFEQLKTVSQKQINEEEYLLNLSKQLGSNSTWYKVRESLIKSYGQAI
DKSWFSKLEVINEDSVNKKIFIKAKTEFEDSYIRENYLKDLESSFKAQGFSFELVKFSNFNKI

Sequences:

>Translated_223_residues
MAKALANELRTTDQANRDNCKFDNEFNKEKYLTQIETSANLSKESQLKHKIAGSFEAAMAYQILTSCSFGPAVRTRFFVK
LLKNITLTECDESKILQVVQDVYGYEIQELQVKPFEQLKTVSQKQINEEEYLLNLSKQLGSNSTWYKVRESLIKSYGQAI
DKSWFSKLEVINEDSVNKKIFIKAKTEFEDSYIRENYLKDLESSFKAQGFSFELVKFSNFNKI
>Mature_222_residues
AKALANELRTTDQANRDNCKFDNEFNKEKYLTQIETSANLSKESQLKHKIAGSFEAAMAYQILTSCSFGPAVRTRFFVKL
LKNITLTECDESKILQVVQDVYGYEIQELQVKPFEQLKTVSQKQINEEEYLLNLSKQLGSNSTWYKVRESLIKSYGQAID
KSWFSKLEVINEDSVNKKIFIKAKTEFEDSYIRENYLKDLESSFKAQGFSFELVKFSNFNKI

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 25880; Mature: 25748

Theoretical pI: Translated: 8.00; Mature: 8.00

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
0.5 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAKALANELRTTDQANRDNCKFDNEFNKEKYLTQIETSANLSKESQLKHKIAGSFEAAMA
CCHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHCHHHHHHH
YQILTSCSFGPAVRTRFFVKLLKNITLTECDESKILQVVQDVYGYEIQELQVKPFEQLKT
HHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCHHHHCCCCHHHHHH
VSQKQINEEEYLLNLSKQLGSNSTWYKVRESLIKSYGQAIDKSWFSKLEVINEDSVNKKI
HHHHHCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEE
FIKAKTEFEDSYIRENYLKDLESSFKAQGFSFELVKFSNFNKI
EEEECCCHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCC
>Mature Secondary Structure 
AKALANELRTTDQANRDNCKFDNEFNKEKYLTQIETSANLSKESQLKHKIAGSFEAAMA
CHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHCHHHHHHH
YQILTSCSFGPAVRTRFFVKLLKNITLTECDESKILQVVQDVYGYEIQELQVKPFEQLKT
HHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCHHHHCCCCHHHHHH
VSQKQINEEEYLLNLSKQLGSNSTWYKVRESLIKSYGQAIDKSWFSKLEVINEDSVNKKI
HHHHHCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEE
FIKAKTEFEDSYIRENYLKDLESSFKAQGFSFELVKFSNFNKI
EEEECCCHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA