| Definition | Orientia tsutsugamushi str. Ikeda, complete genome. |
|---|---|
| Accession | NC_010793 |
| Length | 2,008,987 |
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The map label for this gene is 189184557
Identifier: 189184557
GI number: 189184557
Start: 1682646
End: 1683041
Strand: Reverse
Name: 189184557
Synonym: OTT_1650
Alternate gene names: NA
Gene position: 1683041-1682646 (Counterclockwise)
Preceding gene: 189184558
Following gene: 189184556
Centisome position: 83.78
GC content: 29.29
Gene sequence:
>396_bases ATGTCAGTTAAAATTACTAAAGGAAATAAAAGCGATCTATCTGTAGCTTTAGTTATTTCTAAAGGCTTATCTGGTAAATT GTTTTGTGATAAAGCTTACATATCTAAAGAGTTATTTCATCAACTGTTGACCAATGGTCTACGTTTATTTACTAATCTTA GTAAAGATATGAAAACATATTTATTGGACATAGATGATAAGCGTTTATTAAATAAACGTTCCTTAATTGAGTCTGTCTTT AATGTACTAAAAAAACATATGCATTTAGAGCATACTCAACATCGCTCTCCTATTAATTTCTTTGTTCATATAATTGCTTC TCTTGCTAGTTATTCTATCTCCAAACTTAATCCCTATCTTATCTCCTCTTCTTTCTCTTCTAATCCCCTATCCTAA
Upstream 100 bases:
>100_bases CAATAGAGTTTTTAACAGAATTTCTAAAATTGGTAAGAGTAGTTATGGCTGGTTCTTAGGTTTTAAGCTACATCTCGTAA TTAATAATAAAGGTGAATTA
Downstream 100 bases:
>100_bases TCTGGCGTTATGAAAGTTGATATTTTAAAAAGAATTTTGATAAAATTTCTGATAGTATTATAAGACTGTAAAAAATAAAA TTTGATAACAGTACATGCTA
Product: transposase
Products: NA
Alternate protein names: Transposase IS4 Family Protein; ISPg3 Transposase; Transposase IS4 Family; Transposase And Inactivated Derivative; IS4 Family Transposase; Membrane-Associated Metal-Dependent Hydrolase; Transposase IS
Number of amino acids: Translated: 131; Mature: 130
Protein sequence:
>131_residues MSVKITKGNKSDLSVALVISKGLSGKLFCDKAYISKELFHQLLTNGLRLFTNLSKDMKTYLLDIDDKRLLNKRSLIESVF NVLKKHMHLEHTQHRSPINFFVHIIASLASYSISKLNPYLISSSFSSNPLS
Sequences:
>Translated_131_residues MSVKITKGNKSDLSVALVISKGLSGKLFCDKAYISKELFHQLLTNGLRLFTNLSKDMKTYLLDIDDKRLLNKRSLIESVF NVLKKHMHLEHTQHRSPINFFVHIIASLASYSISKLNPYLISSSFSSNPLS >Mature_130_residues SVKITKGNKSDLSVALVISKGLSGKLFCDKAYISKELFHQLLTNGLRLFTNLSKDMKTYLLDIDDKRLLNKRSLIESVFN VLKKHMHLEHTQHRSPINFFVHIIASLASYSISKLNPYLISSSFSSNPLS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14841; Mature: 14709
Theoretical pI: Translated: 10.44; Mature: 10.44
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSVKITKGNKSDLSVALVISKGLSGKLFCDKAYISKELFHQLLTNGLRLFTNLSKDMKTY CEEEECCCCCCCCEEEEEEECCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LLDIDDKRLLNKRSLIESVFNVLKKHMHLEHTQHRSPINFFVHIIASLASYSISKLNPYL HHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCHHH ISSSFSSNPLS EECCCCCCCCC >Mature Secondary Structure SVKITKGNKSDLSVALVISKGLSGKLFCDKAYISKELFHQLLTNGLRLFTNLSKDMKTY EEEECCCCCCCCEEEEEEECCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LLDIDDKRLLNKRSLIESVFNVLKKHMHLEHTQHRSPINFFVHIIASLASYSISKLNPYL HHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCHHH ISSSFSSNPLS EECCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA