Definition Orientia tsutsugamushi str. Ikeda, complete genome.
Accession NC_010793
Length 2,008,987

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The map label for this gene is 189184558

Identifier: 189184558

GI number: 189184558

Start: 1683136

End: 1683507

Strand: Reverse

Name: 189184558

Synonym: OTT_1651

Alternate gene names: NA

Gene position: 1683507-1683136 (Counterclockwise)

Preceding gene: 189184563

Following gene: 189184557

Centisome position: 83.8

GC content: 29.84

Gene sequence:

>372_bases
ATGAAAAAATGTATTATAACAGTATACTATTTAATAGATAATTTTTGCAAGATATATCAAGAGTGGGAAAGAAAGAGATT
AATACCAAGTAGTAATCAAAGGAACAGAGAGGGAAAGTTGTCCTTAGCTGAGTTATTAACAATAACGATATATTTTTATT
TATCTCCATGCAAGGATTTTAAAAATTATTATCTATATTACTTGAGTCATAAGTATAAGGGATACTTCTGTTTGCCAAGC
TATAGTAGAATAATACAACTGTGTCCTAGAATGTTGCTACCATTAGCAGTATTAATGCATTATCTGAAAGGAGATGAGAC
TGGTTATTACATCGATTCTACAAAGTTAGCAATAACGTACTTCCAGCAATAG

Upstream 100 bases:

>100_bases
AATAGGATAAGAGTAAATATGAAAGGTAGTAAATAAAAGTTATACAAAGAGAGAATGTTGAGTTAAAAAGAAAATTTAAA
TAAAAATAAAATAACCCAAC

Downstream 100 bases:

>100_bases
AGTTTTTAACAGAATTTCTAAAATTGGTAAGAGTAGTTATGGCTGGTTCTTAGGTTTTAAGCTACATCTCGTAATTAATA
ATAAAGGTGAATTAATGTCA

Product: transposase

Products: NA

Alternate protein names: Transposase And Inactivated Derivative; Transposase IS4 Family Protein; ISPg3 Transposase; Transposase IS4 Family; Transposase IS; IS4 Family Transposase; Protease

Number of amino acids: Translated: 123; Mature: 123

Protein sequence:

>123_residues
MKKCIITVYYLIDNFCKIYQEWERKRLIPSSNQRNREGKLSLAELLTITIYFYLSPCKDFKNYYLYYLSHKYKGYFCLPS
YSRIIQLCPRMLLPLAVLMHYLKGDETGYYIDSTKLAITYFQQ

Sequences:

>Translated_123_residues
MKKCIITVYYLIDNFCKIYQEWERKRLIPSSNQRNREGKLSLAELLTITIYFYLSPCKDFKNYYLYYLSHKYKGYFCLPS
YSRIIQLCPRMLLPLAVLMHYLKGDETGYYIDSTKLAITYFQQ
>Mature_123_residues
MKKCIITVYYLIDNFCKIYQEWERKRLIPSSNQRNREGKLSLAELLTITIYFYLSPCKDFKNYYLYYLSHKYKGYFCLPS
YSRIIQLCPRMLLPLAVLMHYLKGDETGYYIDSTKLAITYFQQ

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 14882; Mature: 14882

Theoretical pI: Translated: 9.35; Mature: 9.35

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

4.1 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
6.5 %Cys+Met (Translated Protein)
4.1 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
6.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKCIITVYYLIDNFCKIYQEWERKRLIPSSNQRNREGKLSLAELLTITIYFYLSPCKDF
CCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH
KNYYLYYLSHKYKGYFCLPSYSRIIQLCPRMLLPLAVLMHYLKGDETGYYIDSTKLAITY
HHHEEEEEEECCCCEEECCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCEEEEEE
FQQ
ECC
>Mature Secondary Structure
MKKCIITVYYLIDNFCKIYQEWERKRLIPSSNQRNREGKLSLAELLTITIYFYLSPCKDF
CCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH
KNYYLYYLSHKYKGYFCLPSYSRIIQLCPRMLLPLAVLMHYLKGDETGYYIDSTKLAITY
HHHEEEEEEECCCCEEECCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCEEEEEE
FQQ
ECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA