Definition | Orientia tsutsugamushi str. Ikeda, complete genome. |
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Accession | NC_010793 |
Length | 2,008,987 |
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The map label for this gene is 189184558
Identifier: 189184558
GI number: 189184558
Start: 1683136
End: 1683507
Strand: Reverse
Name: 189184558
Synonym: OTT_1651
Alternate gene names: NA
Gene position: 1683507-1683136 (Counterclockwise)
Preceding gene: 189184563
Following gene: 189184557
Centisome position: 83.8
GC content: 29.84
Gene sequence:
>372_bases ATGAAAAAATGTATTATAACAGTATACTATTTAATAGATAATTTTTGCAAGATATATCAAGAGTGGGAAAGAAAGAGATT AATACCAAGTAGTAATCAAAGGAACAGAGAGGGAAAGTTGTCCTTAGCTGAGTTATTAACAATAACGATATATTTTTATT TATCTCCATGCAAGGATTTTAAAAATTATTATCTATATTACTTGAGTCATAAGTATAAGGGATACTTCTGTTTGCCAAGC TATAGTAGAATAATACAACTGTGTCCTAGAATGTTGCTACCATTAGCAGTATTAATGCATTATCTGAAAGGAGATGAGAC TGGTTATTACATCGATTCTACAAAGTTAGCAATAACGTACTTCCAGCAATAG
Upstream 100 bases:
>100_bases AATAGGATAAGAGTAAATATGAAAGGTAGTAAATAAAAGTTATACAAAGAGAGAATGTTGAGTTAAAAAGAAAATTTAAA TAAAAATAAAATAACCCAAC
Downstream 100 bases:
>100_bases AGTTTTTAACAGAATTTCTAAAATTGGTAAGAGTAGTTATGGCTGGTTCTTAGGTTTTAAGCTACATCTCGTAATTAATA ATAAAGGTGAATTAATGTCA
Product: transposase
Products: NA
Alternate protein names: Transposase And Inactivated Derivative; Transposase IS4 Family Protein; ISPg3 Transposase; Transposase IS4 Family; Transposase IS; IS4 Family Transposase; Protease
Number of amino acids: Translated: 123; Mature: 123
Protein sequence:
>123_residues MKKCIITVYYLIDNFCKIYQEWERKRLIPSSNQRNREGKLSLAELLTITIYFYLSPCKDFKNYYLYYLSHKYKGYFCLPS YSRIIQLCPRMLLPLAVLMHYLKGDETGYYIDSTKLAITYFQQ
Sequences:
>Translated_123_residues MKKCIITVYYLIDNFCKIYQEWERKRLIPSSNQRNREGKLSLAELLTITIYFYLSPCKDFKNYYLYYLSHKYKGYFCLPS YSRIIQLCPRMLLPLAVLMHYLKGDETGYYIDSTKLAITYFQQ >Mature_123_residues MKKCIITVYYLIDNFCKIYQEWERKRLIPSSNQRNREGKLSLAELLTITIYFYLSPCKDFKNYYLYYLSHKYKGYFCLPS YSRIIQLCPRMLLPLAVLMHYLKGDETGYYIDSTKLAITYFQQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14882; Mature: 14882
Theoretical pI: Translated: 9.35; Mature: 9.35
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
4.1 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 6.5 %Cys+Met (Translated Protein) 4.1 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 6.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKCIITVYYLIDNFCKIYQEWERKRLIPSSNQRNREGKLSLAELLTITIYFYLSPCKDF CCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH KNYYLYYLSHKYKGYFCLPSYSRIIQLCPRMLLPLAVLMHYLKGDETGYYIDSTKLAITY HHHEEEEEEECCCCEEECCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCEEEEEE FQQ ECC >Mature Secondary Structure MKKCIITVYYLIDNFCKIYQEWERKRLIPSSNQRNREGKLSLAELLTITIYFYLSPCKDF CCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH KNYYLYYLSHKYKGYFCLPSYSRIIQLCPRMLLPLAVLMHYLKGDETGYYIDSTKLAITY HHHEEEEEEECCCCEEECCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCEEEEEE FQQ ECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA