| Definition | Orientia tsutsugamushi str. Ikeda, complete genome. |
|---|---|
| Accession | NC_010793 |
| Length | 2,008,987 |
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The map label for this gene is 189184555
Identifier: 189184555
GI number: 189184555
Start: 1680944
End: 1681336
Strand: Reverse
Name: 189184555
Synonym: OTT_1648
Alternate gene names: NA
Gene position: 1681336-1680944 (Counterclockwise)
Preceding gene: 189184556
Following gene: 189184554
Centisome position: 83.69
GC content: 36.64
Gene sequence:
>393_bases ATGAATCCTTTTTCAATAGCAGCAGCTAAAGCACTATCATTTGCCACTCAATCTATGAGCGATGCAGTTGAATGCGTTAA TAAGATTATGTTGAATTCTGTGAGTGCTAACTGTAATGTGACTACATTTAGGAAAATACCTCCAGCTGACAACTTGTTTG CCAGTACAGGCAGTATGCTTGTATGTGATAGTACCAAGGTAGATCCATATATGCATCTCCGCAACACTTTGGATTCAATT CGTATGTTTGGAATAACATATAACCCTGACCTTCTTCATGAGTGTACAGGTCAGGAAGTATTAACATCGAGAATGCTATA TCGTGTGAAAGAAATGAGTTACTATATGAACATAATGTTCCAAATTATGATGATAGTATCCAAAACACTGTAG
Upstream 100 bases:
>100_bases CTTATTTAGTGTTTTAGCTATTACATTGCATAAGTATATTGACAACTATTAGTAAATGCATGTTATAATACAAAATATAG AGATTAAGCAAGGTATTATA
Downstream 100 bases:
>100_bases TTAGATACTGTATTAGCTCTTGCAAAATAATCAACTGCAACTTGATCAAGCTGAAAGAATTTTGCTCTGGCATTGGGTGT GATAATTATGATAATACTAC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 130; Mature: 130
Protein sequence:
>130_residues MNPFSIAAAKALSFATQSMSDAVECVNKIMLNSVSANCNVTTFRKIPPADNLFASTGSMLVCDSTKVDPYMHLRNTLDSI RMFGITYNPDLLHECTGQEVLTSRMLYRVKEMSYYMNIMFQIMMIVSKTL
Sequences:
>Translated_130_residues MNPFSIAAAKALSFATQSMSDAVECVNKIMLNSVSANCNVTTFRKIPPADNLFASTGSMLVCDSTKVDPYMHLRNTLDSI RMFGITYNPDLLHECTGQEVLTSRMLYRVKEMSYYMNIMFQIMMIVSKTL >Mature_130_residues MNPFSIAAAKALSFATQSMSDAVECVNKIMLNSVSANCNVTTFRKIPPADNLFASTGSMLVCDSTKVDPYMHLRNTLDSI RMFGITYNPDLLHECTGQEVLTSRMLYRVKEMSYYMNIMFQIMMIVSKTL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14628; Mature: 14628
Theoretical pI: Translated: 7.93; Mature: 7.93
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.1 %Cys (Translated Protein) 9.2 %Met (Translated Protein) 12.3 %Cys+Met (Translated Protein) 3.1 %Cys (Mature Protein) 9.2 %Met (Mature Protein) 12.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNPFSIAAAKALSFATQSMSDAVECVNKIMLNSVSANCNVTTFRKIPPADNLFASTGSML CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCHHHCCCCEE VCDSTKVDPYMHLRNTLDSIRMFGITYNPDLLHECTGQEVLTSRMLYRVKEMSYYMNIMF EECCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHH QIMMIVSKTL HHHHHHHHCC >Mature Secondary Structure MNPFSIAAAKALSFATQSMSDAVECVNKIMLNSVSANCNVTTFRKIPPADNLFASTGSML CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCHHHCCCCEE VCDSTKVDPYMHLRNTLDSIRMFGITYNPDLLHECTGQEVLTSRMLYRVKEMSYYMNIMF EECCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHH QIMMIVSKTL HHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA