| Definition | Orientia tsutsugamushi str. Ikeda, complete genome. |
|---|---|
| Accession | NC_010793 |
| Length | 2,008,987 |
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The map label for this gene is 189184554
Identifier: 189184554
GI number: 189184554
Start: 1680414
End: 1680713
Strand: Reverse
Name: 189184554
Synonym: OTT_1647
Alternate gene names: NA
Gene position: 1680713-1680414 (Counterclockwise)
Preceding gene: 189184555
Following gene: 189184552
Centisome position: 83.66
GC content: 34.0
Gene sequence:
>300_bases TTGATAGTGCCAGCAGTACTAGCAGTTTCTGGAGGTATAGCATTATATGGAATATATCATTTGTGCTCCTCAAAAAATAA AACCAGTTCTTTGCCTGTAAAAAGTTTAGACGTAGGTACAAATGCTAATACTAGTGTTAAAAATTTAAATGCAGAAAAAA TTCTAACAGATTTCCTAGATAATGATGAACAAGCACATTTTTATGAAGATCCAAAGACATGTAAATATGAAGAAGCAGCA TATGATGACACTGCACTGCCAATATCAGGTCAAGATGCAATAAGGGCTGAGGCTGTATAA
Upstream 100 bases:
>100_bases AGTTAGTTCTAGTGTAAATTTTGTTAATGTTACAACTAGTCCTGAAGAGGAAAATTTTTTCACTTCTGCTCCAGAAACAG TAGCAGGTGTAATAGTTCCA
Downstream 100 bases:
>100_bases CAATATTCTCTATACCTCTTATCATAATCTTTATTATTAATAGATACTTTTTTCTTATTTAAGATATAAGTTCTAAATTA TATTGAACATTGAGAAGGCC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 99; Mature: 99
Protein sequence:
>99_residues MIVPAVLAVSGGIALYGIYHLCSSKNKTSSLPVKSLDVGTNANTSVKNLNAEKILTDFLDNDEQAHFYEDPKTCKYEEAA YDDTALPISGQDAIRAEAV
Sequences:
>Translated_99_residues MIVPAVLAVSGGIALYGIYHLCSSKNKTSSLPVKSLDVGTNANTSVKNLNAEKILTDFLDNDEQAHFYEDPKTCKYEEAA YDDTALPISGQDAIRAEAV >Mature_99_residues MIVPAVLAVSGGIALYGIYHLCSSKNKTSSLPVKSLDVGTNANTSVKNLNAEKILTDFLDNDEQAHFYEDPKTCKYEEAA YDDTALPISGQDAIRAEAV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 10651; Mature: 10651
Theoretical pI: Translated: 4.41; Mature: 4.41
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIVPAVLAVSGGIALYGIYHLCSSKNKTSSLPVKSLDVGTNANTSVKNLNAEKILTDFLD CCCCCEEECCCCHHHHHHHHHHCCCCCCCCCCCEEEECCCCCCCCCCCCCHHHHHHHHHC NDEQAHFYEDPKTCKYEEAAYDDTALPISGQDAIRAEAV CCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCEEECCC >Mature Secondary Structure MIVPAVLAVSGGIALYGIYHLCSSKNKTSSLPVKSLDVGTNANTSVKNLNAEKILTDFLD CCCCCEEECCCCHHHHHHHHHHCCCCCCCCCCCEEEECCCCCCCCCCCCCHHHHHHHHHC NDEQAHFYEDPKTCKYEEAAYDDTALPISGQDAIRAEAV CCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCEEECCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA