| Definition | Orientia tsutsugamushi str. Ikeda, complete genome. |
|---|---|
| Accession | NC_010793 |
| Length | 2,008,987 |
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The map label for this gene is yjeE [C]
Identifier: 189184488
GI number: 189184488
Start: 1612045
End: 1612467
Strand: Reverse
Name: yjeE [C]
Synonym: OTT_1581
Alternate gene names: 189184488
Gene position: 1612467-1612045 (Counterclockwise)
Preceding gene: 189184489
Following gene: 189184487
Centisome position: 80.26
GC content: 32.39
Gene sequence:
>423_bases ATGGTTGAAATAAAATTAGGAAATCGAAGTGCCACTAAAGCTTTTGCTCAGCACTTAGCTGTAAATTTGAAGCCAGGATC AATAGTTACTTTCAGTGGAGATTTAGGAGCTGGAAAGACTTTTATATGCAGAGAAATTATTCGTACAATATGTGGAATGA ATACTATAGTATCAAGTCCAACTTTTAATGTACTACAAAGATATCAGGCTGATACCTTTGCAATTTATCATTTTGATTTA TATCGTCTAAGAGATAGTAGTGAGATTTATGAGCTTGGCATTGAAGATGCATGGCAACAAAATATTTGCTTGATTGAATG GCCAGAACTGATAGAAGCTATAATACCTAGGCCTTACATTAGTATAAGGATAACAATGAATGCTAATTTAGAAAGGATTA TTTCAGTTGTAAATTTACTGTAA
Upstream 100 bases:
>100_bases CGGTATTTCTAAGGGATTAAATAAAATGTGGCGATATGTTATTACTGATAAAGAATTTCCTTCAAATATTTTCCTACCTT CTTAGAAGTGATATATCAAG
Downstream 100 bases:
>100_bases TGATAGTGCTTTTTTACAAATTGTATCTTTATAAGATATGTTGATTGCCTTAAAAAAATAAAAATTTACAGATCTAAAAT AAAATCTAGCATTGAAACTA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 140; Mature: 140
Protein sequence:
>140_residues MVEIKLGNRSATKAFAQHLAVNLKPGSIVTFSGDLGAGKTFICREIIRTICGMNTIVSSPTFNVLQRYQADTFAIYHFDL YRLRDSSEIYELGIEDAWQQNICLIEWPELIEAIIPRPYISIRITMNANLERIISVVNLL
Sequences:
>Translated_140_residues MVEIKLGNRSATKAFAQHLAVNLKPGSIVTFSGDLGAGKTFICREIIRTICGMNTIVSSPTFNVLQRYQADTFAIYHFDL YRLRDSSEIYELGIEDAWQQNICLIEWPELIEAIIPRPYISIRITMNANLERIISVVNLL >Mature_140_residues MVEIKLGNRSATKAFAQHLAVNLKPGSIVTFSGDLGAGKTFICREIIRTICGMNTIVSSPTFNVLQRYQADTFAIYHFDL YRLRDSSEIYELGIEDAWQQNICLIEWPELIEAIIPRPYISIRITMNANLERIISVVNLL
Specific function: Unknown
COG id: COG0802
COG function: function code R; Predicted ATPase or kinase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0079 family [H]
Homologues:
Organism=Escherichia coli, GI1790610, Length=127, Percent_Identity=35.4330708661417, Blast_Score=91, Evalue=4e-20,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003442 [H]
Pfam domain/function: PF02367 UPF0079 [H]
EC number: NA
Molecular weight: Translated: 15893; Mature: 15893
Theoretical pI: Translated: 6.51; Mature: 6.51
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVEIKLGNRSATKAFAQHLAVNLKPGSIVTFSGDLGAGKTFICREIIRTICGMNTIVSSP CEEEEECCCHHHHHHHHHHEEECCCCEEEEECCCCCCCHHHHHHHHHHHHCCCHHHHCCC TFNVLQRYQADTFAIYHFDLYRLRDSSEIYELGIEDAWQQNICLIEWPELIEAIIPRPYI HHHHHHHHCCCEEEEEEEEEEEECCCCHHEECCCCCHHHCCEEEEECHHHHHHHCCCCEE SIRITMNANLERIISVVNLL EEEEEECCCHHHHHHHHHCC >Mature Secondary Structure MVEIKLGNRSATKAFAQHLAVNLKPGSIVTFSGDLGAGKTFICREIIRTICGMNTIVSSP CEEEEECCCHHHHHHHHHHEEECCCCEEEEECCCCCCCHHHHHHHHHHHHCCCHHHHCCC TFNVLQRYQADTFAIYHFDLYRLRDSSEIYELGIEDAWQQNICLIEWPELIEAIIPRPYI HHHHHHHHCCCEEEEEEEEEEEECCCCHHEECCCCCHHHCCEEEEECHHHHHHHCCCCEE SIRITMNANLERIISVVNLL EEEEEECCCHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP [C]
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11557893 [H]