| Definition | Orientia tsutsugamushi str. Ikeda, complete genome. |
|---|---|
| Accession | NC_010793 |
| Length | 2,008,987 |
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The map label for this gene is mpg
Identifier: 189184489
GI number: 189184489
Start: 1612483
End: 1613019
Strand: Reverse
Name: mpg
Synonym: OTT_1582
Alternate gene names: NA
Gene position: 1613019-1612483 (Counterclockwise)
Preceding gene: 189184490
Following gene: 189184488
Centisome position: 80.29
GC content: 29.61
Gene sequence:
>537_bases ATGGTTTTAGGTAGAGAATTTTTTTTGCAGGATACAAATATAGTTAGTACCAATTTAATTGGTAAGCTGTTATGTTATAA GAATTTCTGTGGTATTATTACTGAGACAGAAAGCTATATTGGACAAGATGATCCTGCTTGTCATGCTGCTAAAGGCATGA CAAAAAGAACTAAAATTATGTTTGGGCAGGCTGGATTTAGTTATGTATATTTTATATATGGTATGTACTATTGTCTAAAT ATTGTTACTGAGGCTTTAAATTTTCCAGCTGCCACTTTAATTAGAGGAATAAAATTAATTCATCCTCCATATACCCATCT TAATGGGCCAGGTAAAGTTTGCAAATTTTTAGGTATTAATTTAACTCATAATGCTATCGATATTACTTTATCAAAAGAAT TATATATTAAGGATATAGGCTGCACATTAAATTATATGTCTACACCTAGAATCGGTATTTCTAAGGGATTAAATAAAATG TGGCGATATGTTATTACTGATAAAGAATTTCCTTCAAATATTTTCCTACCTTCTTAG
Upstream 100 bases:
>100_bases AAGAAAAATACTCAATCAAAAATAAAGATCGCTTCTGAAAAAAATGATGAAGCTGCAGCAGGATAAATAAATTTTGTTTT CTTGAAATAGAAAAGACAAA
Downstream 100 bases:
>100_bases AAGTGATATATCAAGATGGTTGAAATAAAATTAGGAAATCGAAGTGCCACTAAAGCTTTTGCTCAGCACTTAGCTGTAAA TTTGAAGCCAGGATCAATAG
Product: 3-methyladenine DNA glycosylase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 178; Mature: 178
Protein sequence:
>178_residues MVLGREFFLQDTNIVSTNLIGKLLCYKNFCGIITETESYIGQDDPACHAAKGMTKRTKIMFGQAGFSYVYFIYGMYYCLN IVTEALNFPAATLIRGIKLIHPPYTHLNGPGKVCKFLGINLTHNAIDITLSKELYIKDIGCTLNYMSTPRIGISKGLNKM WRYVITDKEFPSNIFLPS
Sequences:
>Translated_178_residues MVLGREFFLQDTNIVSTNLIGKLLCYKNFCGIITETESYIGQDDPACHAAKGMTKRTKIMFGQAGFSYVYFIYGMYYCLN IVTEALNFPAATLIRGIKLIHPPYTHLNGPGKVCKFLGINLTHNAIDITLSKELYIKDIGCTLNYMSTPRIGISKGLNKM WRYVITDKEFPSNIFLPS >Mature_178_residues MVLGREFFLQDTNIVSTNLIGKLLCYKNFCGIITETESYIGQDDPACHAAKGMTKRTKIMFGQAGFSYVYFIYGMYYCLN IVTEALNFPAATLIRGIKLIHPPYTHLNGPGKVCKFLGINLTHNAIDITLSKELYIKDIGCTLNYMSTPRIGISKGLNKM WRYVITDKEFPSNIFLPS
Specific function: Unknown
COG id: COG2094
COG function: function code L; 3-methyladenine DNA glycosylase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the DNA glycosylase MPG family [H]
Homologues:
Organism=Homo sapiens, GI62632769, Length=162, Percent_Identity=29.0123456790123, Blast_Score=74, Evalue=8e-14, Organism=Homo sapiens, GI62632765, Length=162, Percent_Identity=29.0123456790123, Blast_Score=74, Evalue=1e-13, Organism=Homo sapiens, GI62632771, Length=162, Percent_Identity=29.0123456790123, Blast_Score=74, Evalue=1e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011034 - InterPro: IPR003180 [H]
Pfam domain/function: PF02245 Pur_DNA_glyco [H]
EC number: 3.2.2.-
Molecular weight: Translated: 20073; Mature: 20073
Theoretical pI: Translated: 8.95; Mature: 8.95
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.4 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 6.7 %Cys+Met (Translated Protein) 3.4 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 6.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVLGREFFLQDTNIVSTNLIGKLLCYKNFCGIITETESYIGQDDPACHAAKGMTKRTKIM CCCCCHHEECCCCCHHHHHHHHHHHHHHHCCEEECCHHHCCCCCCCHHHHCCCCHHHEEE FGQAGFSYVYFIYGMYYCLNIVTEALNFPAATLIRGIKLIHPPYTHLNGPGKVCKFLGIN ECCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHCCC LTHNAIDITLSKELYIKDIGCTLNYMSTPRIGISKGLNKMWRYVITDKEFPSNIFLPS EECCEEEEEECCEEEEEECCCEEECCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCC >Mature Secondary Structure MVLGREFFLQDTNIVSTNLIGKLLCYKNFCGIITETESYIGQDDPACHAAKGMTKRTKIM CCCCCHHEECCCCCHHHHHHHHHHHHHHHCCEEECCHHHCCCCCCCHHHHCCCCHHHEEE FGQAGFSYVYFIYGMYYCLNIVTEALNFPAATLIRGIKLIHPPYTHLNGPGKVCKFLGIN ECCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHCCC LTHNAIDITLSKELYIKDIGCTLNYMSTPRIGISKGLNKMWRYVITDKEFPSNIFLPS EECCEEEEEECCEEEEEECCCEEECCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA