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The map label for this gene is traN [H]

Identifier: 189183557

GI number: 189183557

Start: 681563

End: 682765

Strand: Direct

Name: traN [H]

Synonym: OTT_0650

Alternate gene names: 189183557

Gene position: 681563-682765 (Clockwise)

Preceding gene: 189183556

Following gene: 189183559

Centisome position: 33.93

GC content: 33.5

Gene sequence:

>1203_bases
ATGTTATTTCAAGCTGAAAACAGTAAAAACAATGCCTTAACTCAACACAATATCAATGATCAAAATTATATGATAGCTAA
TTCAATTAGAATTGAATCTGATCCTTTAAGTGCCCTTGATAGCAGTAACTTCGTAACTCAGACAAGTACAACTAATACTG
AAATTATTCAAAGTTGTACTGAAGGCAGTAAGTTCAATATTGAACTTATTCGAGAATTAAATGTTGAGTGCAGATTAGAA
AATGTATGGCTTCCATGGCAAAACCGGCAAATTGAATTTGCAAAAAAAGAAATAGTGAAGAATCATAGCAATTGGCTTAA
GAGTCGTAGCGATGTCTATGATGAATCAGGTGCACAAATATACTGCCTAGTAGATGATCCCGAAGCAATTGAAAGACAAA
TGAAATGGGCTATTGTTAATAGGCTCGGTGTACCTACACAGCATATTGGTAGAAATTTTTTATTACATGAAAAAAATGAA
ATATGTATACTTGAATATGACTACAGAGATAAGACTCAAGAACTAAGGGAAGTAGCAGAATATTGGAAAGTTTTAAACCC
TGAACTTGAGCAATTAACAGAAAGTAACGAATGCTATGAGGTCAATAGAATCAACTATGATGGTGGTGATAGAGTATTTT
TTGACAAGTTTAAAGTCAATCGTCCATATTGGAAACAAAAGATTGTTTTTTCATGTACCAGCGATCCAAAAGATGGTTGC
AAACACCTTAAAATTCAAAATTGCGAATTAAAAAATAGCACTTGCCAAAAATCAGTAGCAAATATTTGTTTACTCTGGCA
GCACGATTATAGCTGTTCAACTGAGAAGCAAACAATGCTACACTCATCGTTGCGTAATAACTCGATCTTCTGTTTGGGAG
GCAATTGCAACACTCCGACTATTATACAAAACAGGGATATAGCTAAAGTAGCTCATCTAGCGATGCTAAATCAGATGAGC
AAGGACATTAAAACAAATCCCGTTTCTGTATTTTCAGGGAAACATCGCAAATGCAAAAAAGATGTATTTAGTTTTTTGAA
TTGCTGCTCTTCAATGACTGGCTGGGGGCGTGATATAGGCTTATCACAATGCAAATCTAAGGAACAAGAATTAGCTCTAT
ATAGAAAAAAAGGTTACTGCTACTATATAGATACCGTGATAAGAATCAAGAAAAGAAATAATAATTTTATAAAAAAGATG
TAA

Upstream 100 bases:

>100_bases
AGACAATTAATTATGTGATATTGGAAGATTTGTAAATCCTAATAATGATGAGGATTTAACCTATCATGGCCGTAATCAGC
TTAGTACAGAAAGTGGAACA

Downstream 100 bases:

>100_bases
GTTTTTATAAAATTATTATTTCTGATTGATTAAAACATTAGGATTAAAAGGAGAATTATGCTTTAAAACACCATAAATGA
TATGTAATAACTTACGCATA

Product: putative conjugative transfer protein TraN

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 400; Mature: 400

Protein sequence:

>400_residues
MLFQAENSKNNALTQHNINDQNYMIANSIRIESDPLSALDSSNFVTQTSTTNTEIIQSCTEGSKFNIELIRELNVECRLE
NVWLPWQNRQIEFAKKEIVKNHSNWLKSRSDVYDESGAQIYCLVDDPEAIERQMKWAIVNRLGVPTQHIGRNFLLHEKNE
ICILEYDYRDKTQELREVAEYWKVLNPELEQLTESNECYEVNRINYDGGDRVFFDKFKVNRPYWKQKIVFSCTSDPKDGC
KHLKIQNCELKNSTCQKSVANICLLWQHDYSCSTEKQTMLHSSLRNNSIFCLGGNCNTPTIIQNRDIAKVAHLAMLNQMS
KDIKTNPVSVFSGKHRKCKKDVFSFLNCCSSMTGWGRDIGLSQCKSKEQELALYRKKGYCYYIDTVIRIKKRNNNFIKKM

Sequences:

>Translated_400_residues
MLFQAENSKNNALTQHNINDQNYMIANSIRIESDPLSALDSSNFVTQTSTTNTEIIQSCTEGSKFNIELIRELNVECRLE
NVWLPWQNRQIEFAKKEIVKNHSNWLKSRSDVYDESGAQIYCLVDDPEAIERQMKWAIVNRLGVPTQHIGRNFLLHEKNE
ICILEYDYRDKTQELREVAEYWKVLNPELEQLTESNECYEVNRINYDGGDRVFFDKFKVNRPYWKQKIVFSCTSDPKDGC
KHLKIQNCELKNSTCQKSVANICLLWQHDYSCSTEKQTMLHSSLRNNSIFCLGGNCNTPTIIQNRDIAKVAHLAMLNQMS
KDIKTNPVSVFSGKHRKCKKDVFSFLNCCSSMTGWGRDIGLSQCKSKEQELALYRKKGYCYYIDTVIRIKKRNNNFIKKM
>Mature_400_residues
MLFQAENSKNNALTQHNINDQNYMIANSIRIESDPLSALDSSNFVTQTSTTNTEIIQSCTEGSKFNIELIRELNVECRLE
NVWLPWQNRQIEFAKKEIVKNHSNWLKSRSDVYDESGAQIYCLVDDPEAIERQMKWAIVNRLGVPTQHIGRNFLLHEKNE
ICILEYDYRDKTQELREVAEYWKVLNPELEQLTESNECYEVNRINYDGGDRVFFDKFKVNRPYWKQKIVFSCTSDPKDGC
KHLKIQNCELKNSTCQKSVANICLLWQHDYSCSTEKQTMLHSSLRNNSIFCLGGNCNTPTIIQNRDIAKVAHLAMLNQMS
KDIKTNPVSVFSGKHRKCKKDVFSFLNCCSSMTGWGRDIGLSQCKSKEQELALYRKKGYCYYIDTVIRIKKRNNNFIKKM

Specific function: Essential for F plasmid conjugative transfer. May interact with the recipient cell surface to stabilize mating pairs initiated by F-pili. May interact with traG [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell outer membrane [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009726
- InterPro:   IPR014121 [H]

Pfam domain/function: PF06986 TraN [H]

EC number: NA

Molecular weight: Translated: 46607; Mature: 46607

Theoretical pI: Translated: 8.26; Mature: 8.26

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

4.5 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
6.5 %Cys+Met (Translated Protein)
4.5 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
6.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLFQAENSKNNALTQHNINDQNYMIANSIRIESDPLSALDSSNFVTQTSTTNTEIIQSCT
CCCCCCCCCCCCEEECCCCCCCEEEEEEEEECCCCCHHCCCCCCEEECCCCCHHHHHHHC
EGSKFNIELIRELNVECRLENVWLPWQNRQIEFAKKEIVKNHSNWLKSRSDVYDESGAQI
CCCCEEEEEHECCCCEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCEE
YCLVDDPEAIERQMKWAIVNRLGVPTQHIGRNFLLHEKNEICILEYDYRDKTQELREVAE
EEEECCHHHHHHHHHHHHHHHCCCCHHHHCCCCEEECCCCEEEEEECCCCHHHHHHHHHH
YWKVLNPELEQLTESNECYEVNRINYDGGDRVFFDKFKVNRPYWKQKIVFSCTSDPKDGC
HHHHCCCHHHHHCCCCCCEEEEEECCCCCCEEEEEEEECCCCHHHCEEEEEECCCCHHHH
KHLKIQNCELKNSTCQKSVANICLLWQHDYSCSTEKQTMLHSSLRNNSIFCLGGNCNTPT
HCCEEECCCCCCHHHHHHHHCEEEEEECCCCCCCHHHHHHHHHHCCCEEEEECCCCCCCE
IIQNRDIAKVAHLAMLNQMSKDIKTNPVSVFSGKHRKCKKDVFSFLNCCSSMTGWGRDIG
EECCCCHHHHHHHHHHHHHHHHCCCCCEEECCCCCHHHHHHHHHHHHHHHHCCCCCCCCC
LSQCKSKEQELALYRKKGYCYYIDTVIRIKKRNNNFIKKM
HHHHHCHHHHHHHHHHCCCEEEEEEEEEEEECCCCHHCCC
>Mature Secondary Structure
MLFQAENSKNNALTQHNINDQNYMIANSIRIESDPLSALDSSNFVTQTSTTNTEIIQSCT
CCCCCCCCCCCCEEECCCCCCCEEEEEEEEECCCCCHHCCCCCCEEECCCCCHHHHHHHC
EGSKFNIELIRELNVECRLENVWLPWQNRQIEFAKKEIVKNHSNWLKSRSDVYDESGAQI
CCCCEEEEEHECCCCEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCEE
YCLVDDPEAIERQMKWAIVNRLGVPTQHIGRNFLLHEKNEICILEYDYRDKTQELREVAE
EEEECCHHHHHHHHHHHHHHHCCCCHHHHCCCCEEECCCCEEEEEECCCCHHHHHHHHHH
YWKVLNPELEQLTESNECYEVNRINYDGGDRVFFDKFKVNRPYWKQKIVFSCTSDPKDGC
HHHHCCCHHHHHCCCCCCEEEEEECCCCCCEEEEEEEECCCCHHHCEEEEEECCCCHHHH
KHLKIQNCELKNSTCQKSVANICLLWQHDYSCSTEKQTMLHSSLRNNSIFCLGGNCNTPT
HCCEEECCCCCCHHHHHHHHCEEEEEECCCCCCCHHHHHHHHHHCCCEEEEECCCCCCCE
IIQNRDIAKVAHLAMLNQMSKDIKTNPVSVFSGKHRKCKKDVFSFLNCCSSMTGWGRDIG
EECCCCHHHHHHHHHHHHHHHHCCCCCEEECCCCCHHHHHHHHHHHHHHHHCCCCCCCCC
LSQCKSKEQELALYRKKGYCYYIDTVIRIKKRNNNFIKKM
HHHHHCHHHHHHHHHHCCCEEEEEEEEEEEECCCCHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 1593622; 7915817; 2050638 [H]