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The map label for this gene is traC [H]

Identifier: 189183556

GI number: 189183556

Start: 680535

End: 681497

Strand: Direct

Name: traC [H]

Synonym: OTT_0649

Alternate gene names: 189183556

Gene position: 680535-681497 (Clockwise)

Preceding gene: 189183555

Following gene: 189183557

Centisome position: 33.87

GC content: 35.41

Gene sequence:

>963_bases
ATGAAAAATCCTGTATCAATTAATCCATTTTCAGAGGTGCCAGAGAATGATAGTGCAAAGTCTATAGAGGCTAGATCAGA
TTTTTTATCTAACTTTCCATTTATTTTAGCAACTATGGCTGCTCCACAGTATGGAACAAGCGATTTGCAACAACCAATGC
TACAGAGAGCTTTGATATCAGTCTGGCAAAAAAAGGGAGCTAAAGCTGAAATTACCGATATTGCAGACTGGTTATCAAAT
AGAGAAGAATCATATGCTAAAGAGCTTGGAAATATGCTCTTTCCTTTTACTAAAGATGGGCAACATGGAAGATTTTTTAG
TGGTAAGGCGCAATTATCCTTGAATTCAGACATAGTAGTGATTGAAACAGATCATTTAAGGTCTGTACCAGAGCTGTTAG
CTATGATAGTTCAGATTATGATTGTTCATATTAATCAAACAATGGTTAAAGGAGATAGAAGTAGACCATTTTTAATTATG
ATAGATGAAGCCTGGAAACTGTTAGCTGGAAAGCGTTCAGGAGAGTTTATTGAAGAAGCTGGAAGAATAGCTCGAAAATA
TAATGGATCGATTGCTTTAGCTACTCAGCAACTCACGGATTACTTTCGTCAAGAGGGTTCTGCATCTGAAAAAGCATTTG
AGAACTCATCACATAAGATAATTTTGAAGCAAAATTCTGAATCATTTAAGGCAATGCGAGCTAAACCTAAGCTTGCAGGC
TTTGTTGATGAAGATTGGAAGCTGAATTTGCTGCAATCTGTACATTCAAATCCTCCATATTATAGTGAAATAGCTATTTA
CAGCCCTAATGTTTCAGGTGTTGTAGGCAGATTAATGATTGATCCATTTACTCTACTGTTAACTTCGACGAATGCTAGAG
ATTATCAAGCAATAGAAGATTACATGGCTAAAGGTATGAATGTTAGTGAGACAATTAATTATGTGATATTGGAAGATTTG
TAA

Upstream 100 bases:

>100_bases
ATCGGTTCTAGGAGTTGGTGGGAAAGTTTTTGTTCTTGATTACTGAAGATCATTTAAGCGTACATGTTTGATTCTAGGCG
GAAGCTACATAGAATTTGAC

Downstream 100 bases:

>100_bases
ATCCTAATAATGATGAGGATTTAACCTATCATGGCCGTAATCAGCTTAGTACAGAAAGTGGAACAATGTTATTTCAAGCT
GAAAACAGTAAAAACAATGC

Product: putative conjugative transfer protein TraC

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 320; Mature: 320

Protein sequence:

>320_residues
MKNPVSINPFSEVPENDSAKSIEARSDFLSNFPFILATMAAPQYGTSDLQQPMLQRALISVWQKKGAKAEITDIADWLSN
REESYAKELGNMLFPFTKDGQHGRFFSGKAQLSLNSDIVVIETDHLRSVPELLAMIVQIMIVHINQTMVKGDRSRPFLIM
IDEAWKLLAGKRSGEFIEEAGRIARKYNGSIALATQQLTDYFRQEGSASEKAFENSSHKIILKQNSESFKAMRAKPKLAG
FVDEDWKLNLLQSVHSNPPYYSEIAIYSPNVSGVVGRLMIDPFTLLLTSTNARDYQAIEDYMAKGMNVSETINYVILEDL

Sequences:

>Translated_320_residues
MKNPVSINPFSEVPENDSAKSIEARSDFLSNFPFILATMAAPQYGTSDLQQPMLQRALISVWQKKGAKAEITDIADWLSN
REESYAKELGNMLFPFTKDGQHGRFFSGKAQLSLNSDIVVIETDHLRSVPELLAMIVQIMIVHINQTMVKGDRSRPFLIM
IDEAWKLLAGKRSGEFIEEAGRIARKYNGSIALATQQLTDYFRQEGSASEKAFENSSHKIILKQNSESFKAMRAKPKLAG
FVDEDWKLNLLQSVHSNPPYYSEIAIYSPNVSGVVGRLMIDPFTLLLTSTNARDYQAIEDYMAKGMNVSETINYVILEDL
>Mature_320_residues
MKNPVSINPFSEVPENDSAKSIEARSDFLSNFPFILATMAAPQYGTSDLQQPMLQRALISVWQKKGAKAEITDIADWLSN
REESYAKELGNMLFPFTKDGQHGRFFSGKAQLSLNSDIVVIETDHLRSVPELLAMIVQIMIVHINQTMVKGDRSRPFLIM
IDEAWKLLAGKRSGEFIEEAGRIARKYNGSIALATQQLTDYFRQEGSASEKAFENSSHKIILKQNSESFKAMRAKPKLAG
FVDEDWKLNLLQSVHSNPPYYSEIAIYSPNVSGVVGRLMIDPFTLLLTSTNARDYQAIEDYMAKGMNVSETINYVILEDL

Specific function: Required for the assembly of mature F-pilin subunits into extended F pili [H]

COG id: COG3451

COG function: function code U; Type IV secretory pathway, VirB4 components

Gene ontology:

Cell location: Cell inner membrane; Peripheral membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002789
- InterPro:   IPR014117 [H]

Pfam domain/function: PF01935 DUF87 [H]

EC number: NA

Molecular weight: Translated: 35986; Mature: 35986

Theoretical pI: Translated: 5.74; Mature: 5.74

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKNPVSINPFSEVPENDSAKSIEARSDFLSNFPFILATMAAPQYGTSDLQQPMLQRALIS
CCCCCCCCCHHCCCCCCCCCHHHHHHHHHHCCCHHHHHHCCCCCCHHHHHHHHHHHHHHH
VWQKKGAKAEITDIADWLSNREESYAKELGNMLFPFTKDGQHGRFFSGKAQLSLNSDIVV
HHHHCCCCCHHHHHHHHHHCHHHHHHHHHHHHCCCCCCCCCCCCEECCEEEEEECCCEEE
IETDHLRSVPELLAMIVQIMIVHINQTMVKGDRSRPFLIMIDEAWKLLAGKRSGEFIEEA
EECHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEHHHHHHHHCCCCCHHHHHH
GRIARKYNGSIALATQQLTDYFRQEGSASEKAFENSSHKIILKQNSESFKAMRAKPKLAG
HHHHHHHCCCEEEEHHHHHHHHHHCCCCHHHHHCCCCCEEEEECCCHHHHHHHCCCCCCC
FVDEDWKLNLLQSVHSNPPYYSEIAIYSPNVSGVVGRLMIDPFTLLLTSTNARDYQAIED
CCCCCHHHHHHHHHHCCCCCCCEEEEECCCHHHHHHHHHHCCEEEEEECCCCCHHHHHHH
YMAKGMNVSETINYVILEDL
HHHCCCCHHHHEEEEEEECC
>Mature Secondary Structure
MKNPVSINPFSEVPENDSAKSIEARSDFLSNFPFILATMAAPQYGTSDLQQPMLQRALIS
CCCCCCCCCHHCCCCCCCCCHHHHHHHHHHCCCHHHHHHCCCCCCHHHHHHHHHHHHHHH
VWQKKGAKAEITDIADWLSNREESYAKELGNMLFPFTKDGQHGRFFSGKAQLSLNSDIVV
HHHHCCCCCHHHHHHHHHHCHHHHHHHHHHHHCCCCCCCCCCCCEECCEEEEEECCCEEE
IETDHLRSVPELLAMIVQIMIVHINQTMVKGDRSRPFLIMIDEAWKLLAGKRSGEFIEEA
EECHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEHHHHHHHHCCCCCHHHHHH
GRIARKYNGSIALATQQLTDYFRQEGSASEKAFENSSHKIILKQNSESFKAMRAKPKLAG
HHHHHHHCCCEEEEHHHHHHHHHHCCCCHHHHHCCCCCEEEEECCCHHHHHHHCCCCCCC
FVDEDWKLNLLQSVHSNPPYYSEIAIYSPNVSGVVGRLMIDPFTLLLTSTNARDYQAIED
CCCCCHHHHHHHHHHCCCCCCCEEEEECCCHHHHHHHHHHCCEEEEEECCCCCHHHHHHH
YMAKGMNVSETINYVILEDL
HHHCCCCHHHHEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 2265751; 7915817; 1355084 [H]