| Definition | Orientia tsutsugamushi str. Ikeda, complete genome. |
|---|---|
| Accession | NC_010793 |
| Length | 2,008,987 |
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The map label for this gene is 189183559
Identifier: 189183559
GI number: 189183559
Start: 684080
End: 684274
Strand: Direct
Name: 189183559
Synonym: OTT_0652
Alternate gene names: NA
Gene position: 684080-684274 (Clockwise)
Preceding gene: 189183557
Following gene: 189183560
Centisome position: 34.05
GC content: 33.85
Gene sequence:
>195_bases TTGAACTTTGGAACACCTGAATGTCCAAAGTGTAGAGGACTAACTGTTGAGGAATTACAAAAAGTTGATTTCACTAAAAT CAATATGGATGAACTATTTGGTGATATACTCACTAAGGCTCAAAACAGCATGAACAAAGACATTATTGCAGGAATCAAAG ATAAAGTTCATCGTATGCAACAAAGTCGTCATTAA
Upstream 100 bases:
>100_bases TCAGATATTAGGTATTTGCTTAGCTAGAAAGTCTACTTATTGCTGCTTTCAGTCGAAACTTGCTAGAATTTTTCAGGAAG AAGCAAGAAAACAGCTAAAA
Downstream 100 bases:
>100_bases TACTACCGCTAATCCCTATAGACTTTATATTAATGACTTTACCTATAGAAAATCACGCGTATTTAATGCAACATAATTTG TTATAACATGTTGTAATAAT
Product: putative conjugative transfer protein TraN
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 64; Mature: 64
Protein sequence:
>64_residues MNFGTPECPKCRGLTVEELQKVDFTKINMDELFGDILTKAQNSMNKDIIAGIKDKVHRMQQSRH
Sequences:
>Translated_64_residues MNFGTPECPKCRGLTVEELQKVDFTKINMDELFGDILTKAQNSMNKDIIAGIKDKVHRMQQSRH >Mature_64_residues MNFGTPECPKCRGLTVEELQKVDFTKINMDELFGDILTKAQNSMNKDIIAGIKDKVHRMQQSRH
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 7351; Mature: 7351
Theoretical pI: Translated: 8.24; Mature: 8.24
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.1 %Cys (Translated Protein) 6.2 %Met (Translated Protein) 9.4 %Cys+Met (Translated Protein) 3.1 %Cys (Mature Protein) 6.2 %Met (Mature Protein) 9.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNFGTPECPKCRGLTVEELQKVDFTKINMDELFGDILTKAQNSMNKDIIAGIKDKVHRMQ CCCCCCCCCCCCCCCHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH QSRH HCCC >Mature Secondary Structure MNFGTPECPKCRGLTVEELQKVDFTKINMDELFGDILTKAQNSMNKDIIAGIKDKVHRMQ CCCCCCCCCCCCCCCHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH QSRH HCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA