| Definition | Orientia tsutsugamushi str. Ikeda, complete genome. |
|---|---|
| Accession | NC_010793 |
| Length | 2,008,987 |
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The map label for this gene is leuS [H]
Identifier: 189183513
GI number: 189183513
Start: 627669
End: 627932
Strand: Direct
Name: leuS [H]
Synonym: OTT_0606
Alternate gene names: 189183513
Gene position: 627669-627932 (Clockwise)
Preceding gene: 189183512
Following gene: 189183514
Centisome position: 31.24
GC content: 29.17
Gene sequence:
>264_bases TTGTGCTCAAACCTCGTTGTAAATGACTATATATATGTAAATACTATACCAAAAATTCAAGAATTTATTAATAAATGCAG TAACATTGGCACATTAAATGTTAATATTGATAAAATGAGTAAAATTGCCGTGCTAATAAATCTTATAGAATTGACTGTTA TTCTTAGTAATTTTGTCTTAATGGATTATGGTACTGGGGCATTATTTGGATGTCCAACACGGGATGAGAAGGATTATGCT GAAGAATTTTTGCACAACACATAA
Upstream 100 bases:
>100_bases AGCTTGAAATCATTTTTTCAATAGGATTTAAATCAGGAGAATAAGGTAGCAGAAAAATAACTTTACAACCAACAGATTTT ATTAATTTTATTGCTTCTTT
Downstream 100 bases:
>100_bases ATTCTTCTAATTATAATTAGACATTATCTCTTGTAGACTTTTCATCTTTTTTCTTATCCTAAACTGACATTAAAAGTGAT TTTTAATTTTTTACTGAAGT
Product: leucyl-tRNA synthetase
Products: NA
Alternate protein names: Leucine--tRNA ligase; LeuRS [H]
Number of amino acids: Translated: 87; Mature: 87
Protein sequence:
>87_residues MCSNLVVNDYIYVNTIPKIQEFINKCSNIGTLNVNIDKMSKIAVLINLIELTVILSNFVLMDYGTGALFGCPTRDEKDYA EEFLHNT
Sequences:
>Translated_87_residues MCSNLVVNDYIYVNTIPKIQEFINKCSNIGTLNVNIDKMSKIAVLINLIELTVILSNFVLMDYGTGALFGCPTRDEKDYA EEFLHNT >Mature_87_residues MCSNLVVNDYIYVNTIPKIQEFINKCSNIGTLNVNIDKMSKIAVLINLIELTVILSNFVLMDYGTGALFGCPTRDEKDYA EEFLHNT
Specific function: Unknown
COG id: COG0495
COG function: function code J; Leucyl-tRNA synthetase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the class-I aminoacyl-tRNA synthetase family [H]
Homologues:
None
Paralogues:
None
Copy number: 800 Molecules/Cell In: Glucose minimal media [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002300 - InterPro: IPR002302 - InterPro: IPR014729 - InterPro: IPR009080 - InterPro: IPR013155 - InterPro: IPR009008 [H]
Pfam domain/function: PF08264 Anticodon_1; PF00133 tRNA-synt_1 [H]
EC number: =6.1.1.4 [H]
Molecular weight: Translated: 9822; Mature: 9822
Theoretical pI: Translated: 4.40; Mature: 4.40
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.4 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 6.9 %Cys+Met (Translated Protein) 3.4 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 6.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MCSNLVVNDYIYVNTIPKIQEFINKCSNIGTLNVNIDKMSKIAVLINLIELTVILSNFVL CCCCEEECCEEEEECCHHHHHHHHHHCCCCEEEECHHHHHHHHHHHHHHHHHHHHHHHHE MDYGTGALFGCPTRDEKDYAEEFLHNT EECCCCCEEECCCCCCHHHHHHHHCCC >Mature Secondary Structure MCSNLVVNDYIYVNTIPKIQEFINKCSNIGTLNVNIDKMSKIAVLINLIELTVILSNFVL CCCCEEECCEEEEECCHHHHHHHHHHCCCCEEEECHHHHHHHHHHHHHHHHHHHHHHHHE MDYGTGALFGCPTRDEKDYAEEFLHNT EECCCCCEEECCCCCCHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA