Definition Orientia tsutsugamushi str. Ikeda, complete genome.
Accession NC_010793
Length 2,008,987

Click here to switch to the map view.

The map label for this gene is 189183514

Identifier: 189183514

GI number: 189183514

Start: 628176

End: 628889

Strand: Direct

Name: 189183514

Synonym: OTT_0607

Alternate gene names: NA

Gene position: 628176-628889 (Clockwise)

Preceding gene: 189183513

Following gene: 189183519

Centisome position: 31.27

GC content: 33.89

Gene sequence:

>714_bases
ATGCATCGTGGGAGCAGTACGCAATTTAATATCCAGGCAATGGGTAGCATCCAATTATGTAAGATGCTTAAAGATAGAGA
TGTATTATCCAAACCTATTATAACAGAGATTTACAATAGAGCTTTGTTTTTACTGCAAACTGAAGATGCAAGATACAATA
GAGTGCAGTTTGATGCTAGAGGCTTAGCAACAATTCTATATCAATTTGCAAAATTAAACTATGTTATAGGTTCTGAGTTT
ATTGAGGCTTGGACAAATAAAGCTATAAATCTAATGGATGAGTTTAACCCTCAGGAGTTAGCTAATTCCATATGGGCATT
TGGACGGTTAGAAATTCATCCATCAGATCAATTCATTCAGGCTTGGATACATCATGCTACTAAAACTATTGATAACTTTA
ATACTCAAGGGTTAGCTAATTCCATATGGGCATTTGGACGGTTAGAAATTCATCCATCAGATCAATTCATTCAGGCTTGG
ATACATCATGCTACTAAAACTATTGATAACTTTAATACTCAAGGGTTAGCTAATTCAATATTGGCATTAGGACAGTTAGA
AATTCATCCATCAGATCAATTCATTCAGGCTTGGATACATCATGCTACTAAAACTATTGATAACTTTAATACTCAAAATT
TAGCTAATTCCATATGGGCATTTGGACAGTTAGAAATTCATCCATCAGATCAATTCATTCAAGCTTGGATATAG

Upstream 100 bases:

>100_bases
AATGGCATGATATATATATTACTCGATTAATGTATATTATATTCTTTATCAAAAGACGTATTTAGTATTACAAAGTCAAA
CTATATAAGGAGCTTAGAAC

Downstream 100 bases:

>100_bases
CAATAACGTAGGAAATAGGTACAATCAGATAAACTGCATTACGTGTGCTACAGCCATGCTAATATCTTTGAATTGAGGAG
TAACTTTTCTTATTTCGTTC

Product: repeat-containing protein A_03

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 237; Mature: 237

Protein sequence:

>237_residues
MHRGSSTQFNIQAMGSIQLCKMLKDRDVLSKPIITEIYNRALFLLQTEDARYNRVQFDARGLATILYQFAKLNYVIGSEF
IEAWTNKAINLMDEFNPQELANSIWAFGRLEIHPSDQFIQAWIHHATKTIDNFNTQGLANSIWAFGRLEIHPSDQFIQAW
IHHATKTIDNFNTQGLANSILALGQLEIHPSDQFIQAWIHHATKTIDNFNTQNLANSIWAFGQLEIHPSDQFIQAWI

Sequences:

>Translated_237_residues
MHRGSSTQFNIQAMGSIQLCKMLKDRDVLSKPIITEIYNRALFLLQTEDARYNRVQFDARGLATILYQFAKLNYVIGSEF
IEAWTNKAINLMDEFNPQELANSIWAFGRLEIHPSDQFIQAWIHHATKTIDNFNTQGLANSIWAFGRLEIHPSDQFIQAW
IHHATKTIDNFNTQGLANSILALGQLEIHPSDQFIQAWIHHATKTIDNFNTQNLANSIWAFGQLEIHPSDQFIQAWI
>Mature_237_residues
MHRGSSTQFNIQAMGSIQLCKMLKDRDVLSKPIITEIYNRALFLLQTEDARYNRVQFDARGLATILYQFAKLNYVIGSEF
IEAWTNKAINLMDEFNPQELANSIWAFGRLEIHPSDQFIQAWIHHATKTIDNFNTQGLANSIWAFGRLEIHPSDQFIQAW
IHHATKTIDNFNTQGLANSILALGQLEIHPSDQFIQAWIHHATKTIDNFNTQNLANSIWAFGQLEIHPSDQFIQAWI

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 27280; Mature: 27280

Theoretical pI: Translated: 6.43; Mature: 6.43

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHRGSSTQFNIQAMGSIQLCKMLKDRDVLSKPIITEIYNRALFLLQTEDARYNRVQFDAR
CCCCCCCEEEEEECCHHHHHHHHHHHHHHHCHHHHHHHHHEEEEEEECCCCCCEEEECHH
GLATILYQFAKLNYVIGSEFIEAWTNKAINLMDEFNPQELANSIWAFGRLEIHPSDQFIQ
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHEEEEECCCHHHHH
AWIHHATKTIDNFNTQGLANSIWAFGRLEIHPSDQFIQAWIHHATKTIDNFNTQGLANSI
HHHHHHHHHHHCCCCCHHHHHHHHHEEEEECCCHHHHHHHHHHHHHHHHCCCCHHHHHHH
LALGQLEIHPSDQFIQAWIHHATKTIDNFNTQNLANSIWAFGQLEIHPSDQFIQAWI
HHHCEEEECCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCEEEEECCCHHHHHHCC
>Mature Secondary Structure
MHRGSSTQFNIQAMGSIQLCKMLKDRDVLSKPIITEIYNRALFLLQTEDARYNRVQFDAR
CCCCCCCEEEEEECCHHHHHHHHHHHHHHHCHHHHHHHHHEEEEEEECCCCCCEEEECHH
GLATILYQFAKLNYVIGSEFIEAWTNKAINLMDEFNPQELANSIWAFGRLEIHPSDQFIQ
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHEEEEECCCHHHHH
AWIHHATKTIDNFNTQGLANSIWAFGRLEIHPSDQFIQAWIHHATKTIDNFNTQGLANSI
HHHHHHHHHHHCCCCCHHHHHHHHHEEEEECCCHHHHHHHHHHHHHHHHCCCCHHHHHHH
LALGQLEIHPSDQFIQAWIHHATKTIDNFNTQNLANSIWAFGQLEIHPSDQFIQAWI
HHHCEEEECCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCEEEEECCCHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA