| Definition | Orientia tsutsugamushi str. Ikeda, complete genome. |
|---|---|
| Accession | NC_010793 |
| Length | 2,008,987 |
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The map label for this gene is 189183298
Identifier: 189183298
GI number: 189183298
Start: 409532
End: 410122
Strand: Direct
Name: 189183298
Synonym: OTT_0391
Alternate gene names: NA
Gene position: 409532-410122 (Clockwise)
Preceding gene: 189183296
Following gene: 189183299
Centisome position: 20.39
GC content: 26.73
Gene sequence:
>591_bases ATGCCATATGGTGAACAAGATAATTTATATACTTTCAACCAATACCTTGATAACAAAGATAACTTAGGAATAAAATCATT AGAATCTCATCTGCGGTCTAAGGAATTTTTAAGTAAAATTTTTCAGTACAGTGAAAGATGTATTTACTCAAATGAAGATT TTGATGAATTCATTCGTAAGCTAGACTTAGATAACTTAGAAAAACTACTATATCCAGCTAGAATAATAGAAGCTTCCAAT ATCATAAGTATGTTATGCTATAGCATGCATTGTAGAATCAATCTAGATGTATTAGCAGACACATTAAAGGTATTAACTTC AAATATTAATACATTAGAAGTCTTATATAACTTAAATATACCTTTTTCTACTTTTTTCACTAAGTTACATCATGCAGTAT ATAAGACACCAGATTGTTTGAAAATGATATTTGAATTTTTTGAGCTAAAGCTGGAAAAGCTGCCAAAACCCACATATGAA GAAATATGTAAAATAAAAGAATATTTTTTGAGCTTTTGTAAAAAATTTTCACAAAAATTTCATAGGATAACAAACAGTCA AAACCCACATATGAAGAAATATGTAAAATAA
Upstream 100 bases:
>100_bases ATTTTGAATCAAGTAATGCTATATTTGCATTATTGATTATTTAGAAAATGAGTATATAGAGGAGGCTGTTTTATTTAATG AATCAATAAAAGGAATTTAT
Downstream 100 bases:
>100_bases AAGAATATTTTTTGAGCTTTTGTAAAAAATTTTCACAAAAATTTCATAGGATAACAAACAGTAACATAGTAAAGGTTAAA GAGTTTTTTAAAGAAGAAGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 196; Mature: 195
Protein sequence:
>196_residues MPYGEQDNLYTFNQYLDNKDNLGIKSLESHLRSKEFLSKIFQYSERCIYSNEDFDEFIRKLDLDNLEKLLYPARIIEASN IISMLCYSMHCRINLDVLADTLKVLTSNINTLEVLYNLNIPFSTFFTKLHHAVYKTPDCLKMIFEFFELKLEKLPKPTYE EICKIKEYFLSFCKKFSQKFHRITNSQNPHMKKYVK
Sequences:
>Translated_196_residues MPYGEQDNLYTFNQYLDNKDNLGIKSLESHLRSKEFLSKIFQYSERCIYSNEDFDEFIRKLDLDNLEKLLYPARIIEASN IISMLCYSMHCRINLDVLADTLKVLTSNINTLEVLYNLNIPFSTFFTKLHHAVYKTPDCLKMIFEFFELKLEKLPKPTYE EICKIKEYFLSFCKKFSQKFHRITNSQNPHMKKYVK >Mature_195_residues PYGEQDNLYTFNQYLDNKDNLGIKSLESHLRSKEFLSKIFQYSERCIYSNEDFDEFIRKLDLDNLEKLLYPARIIEASNI ISMLCYSMHCRINLDVLADTLKVLTSNINTLEVLYNLNIPFSTFFTKLHHAVYKTPDCLKMIFEFFELKLEKLPKPTYEE ICKIKEYFLSFCKKFSQKFHRITNSQNPHMKKYVK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23465; Mature: 23334
Theoretical pI: Translated: 8.11; Mature: 8.11
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.1 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 5.6 %Cys+Met (Translated Protein) 3.1 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 5.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPYGEQDNLYTFNQYLDNKDNLGIKSLESHLRSKEFLSKIFQYSERCIYSNEDFDEFIRK CCCCCCCCEEEHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHH LDLDNLEKLLYPARIIEASNIISMLCYSMHCRINLDVLADTLKVLTSNINTLEVLYNLNI HCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCHHHHEEECCC PFSTFFTKLHHAVYKTPDCLKMIFEFFELKLEKLPKPTYEEICKIKEYFLSFCKKFSQKF CHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHH HRITNSQNPHMKKYVK HHHHCCCCCHHHHHCC >Mature Secondary Structure PYGEQDNLYTFNQYLDNKDNLGIKSLESHLRSKEFLSKIFQYSERCIYSNEDFDEFIRK CCCCCCCEEEHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHH LDLDNLEKLLYPARIIEASNIISMLCYSMHCRINLDVLADTLKVLTSNINTLEVLYNLNI HCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCHHHHEEECCC PFSTFFTKLHHAVYKTPDCLKMIFEFFELKLEKLPKPTYEEICKIKEYFLSFCKKFSQKF CHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHH HRITNSQNPHMKKYVK HHHHCCCCCHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA