Definition Orientia tsutsugamushi str. Ikeda, complete genome.
Accession NC_010793
Length 2,008,987

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The map label for this gene is 189183296

Identifier: 189183296

GI number: 189183296

Start: 403317

End: 403991

Strand: Direct

Name: 189183296

Synonym: OTT_0389

Alternate gene names: NA

Gene position: 403317-403991 (Clockwise)

Preceding gene: 189183289

Following gene: 189183298

Centisome position: 20.08

GC content: 25.48

Gene sequence:

>675_bases
ATGCGTCAAAAGAATATATTAATATTAACTGATCAGAATAAATTATACATAGCATTATGTGTTCTATTTTCTGTATTAGT
TATAACTAACAATATGGTTTATCAAAAATTTGTTTATTTGCCGTTTTTTGGGTTGCATATTTTTGAACTTTCTGTAGGAG
CTATATTGTATCCTATAAACTTTCTAATTACAGATATAATAGCTGAATTTTATGGAAAAAATCATGCAAGATACTGCATT
AGGATGGCAATATTAATGAATATATTAGTTGCTGTGATCATTAAGGTTTTCAGTTTACTTAATGCAACTAGCTGGTCTAA
AATTGATAATAATCTTTTTAATCAAATGTTTAGTATGTATCATATAGCTTTTGTTGGTTCGTTATTAGCTAGTTATACAT
CGCAAATTGTTGATATAAACATATATCTAGGATTAAAATCACTGACTAAGGGAAAATATTTATTAGTCAGAAATAATGTC
AGTACTGCAATTTCTTTGTTTATTGATACGTGTATTGTTGTAGGATTTTTATGTATATTTAAAATTCTGCCTATTCAGAT
AGCATTTAATTTAATATTTAACAGCTATACTTTTAAATTATTATTTACTATATTAAGTACTCCACTATTTTACCTAGCAG
TAACTATACTAACCAGAGTTCAATATAAGGAATAG

Upstream 100 bases:

>100_bases
TTATTTAAATTTTCTTTGTAACTCAATATTTTCCCTTTATATACCTTTTATGCTATAATTTTCATACTTTTCATCATCAT
AATCTAGCATTTATAGAGTA

Downstream 100 bases:

>100_bases
GTCATATAGAGATGTAAGCTTATTACTATTTCTTATTTAGTTTTGAGATCTTTATACTCCATCTTATCTTTTTTTATTCC
TTCTATTACGCTTCTGTATA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 224; Mature: 224

Protein sequence:

>224_residues
MRQKNILILTDQNKLYIALCVLFSVLVITNNMVYQKFVYLPFFGLHIFELSVGAILYPINFLITDIIAEFYGKNHARYCI
RMAILMNILVAVIIKVFSLLNATSWSKIDNNLFNQMFSMYHIAFVGSLLASYTSQIVDINIYLGLKSLTKGKYLLVRNNV
STAISLFIDTCIVVGFLCIFKILPIQIAFNLIFNSYTFKLLFTILSTPLFYLAVTILTRVQYKE

Sequences:

>Translated_224_residues
MRQKNILILTDQNKLYIALCVLFSVLVITNNMVYQKFVYLPFFGLHIFELSVGAILYPINFLITDIIAEFYGKNHARYCI
RMAILMNILVAVIIKVFSLLNATSWSKIDNNLFNQMFSMYHIAFVGSLLASYTSQIVDINIYLGLKSLTKGKYLLVRNNV
STAISLFIDTCIVVGFLCIFKILPIQIAFNLIFNSYTFKLLFTILSTPLFYLAVTILTRVQYKE
>Mature_224_residues
MRQKNILILTDQNKLYIALCVLFSVLVITNNMVYQKFVYLPFFGLHIFELSVGAILYPINFLITDIIAEFYGKNHARYCI
RMAILMNILVAVIIKVFSLLNATSWSKIDNNLFNQMFSMYHIAFVGSLLASYTSQIVDINIYLGLKSLTKGKYLLVRNNV
STAISLFIDTCIVVGFLCIFKILPIQIAFNLIFNSYTFKLLFTILSTPLFYLAVTILTRVQYKE

Specific function: Unknown

COG id: COG1738

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 25726; Mature: 25726

Theoretical pI: Translated: 9.67; Mature: 9.67

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRQKNILILTDQNKLYIALCVLFSVLVITNNMVYQKFVYLPFFGLHIFELSVGAILYPIN
CCCCCEEEEECCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FLITDIIAEFYGKNHARYCIRMAILMNILVAVIIKVFSLLNATSWSKIDNNLFNQMFSMY
HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH
HIAFVGSLLASYTSQIVDINIYLGLKSLTKGKYLLVRNNVSTAISLFIDTCIVVGFLCIF
HHHHHHHHHHHHHHHHEEEEEEEEHHHHCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHH
KILPIQIAFNLIFNSYTFKLLFTILSTPLFYLAVTILTRVQYKE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MRQKNILILTDQNKLYIALCVLFSVLVITNNMVYQKFVYLPFFGLHIFELSVGAILYPIN
CCCCCEEEEECCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FLITDIIAEFYGKNHARYCIRMAILMNILVAVIIKVFSLLNATSWSKIDNNLFNQMFSMY
HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH
HIAFVGSLLASYTSQIVDINIYLGLKSLTKGKYLLVRNNVSTAISLFIDTCIVVGFLCIF
HHHHHHHHHHHHHHHHEEEEEEEEHHHHCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHH
KILPIQIAFNLIFNSYTFKLLFTILSTPLFYLAVTILTRVQYKE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA