Definition Orientia tsutsugamushi str. Ikeda, complete genome.
Accession NC_010793
Length 2,008,987

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The map label for this gene is 189183299

Identifier: 189183299

GI number: 189183299

Start: 410134

End: 411795

Strand: Direct

Name: 189183299

Synonym: OTT_0392

Alternate gene names: NA

Gene position: 410134-411795 (Clockwise)

Preceding gene: 189183298

Following gene: 189183300

Centisome position: 20.41

GC content: 29.36

Gene sequence:

>1662_bases
TTGAGCTTTTGTAAAAAATTTTCACAAAAATTTCATAGGATAACAAACAGTAACATAGTAAAGGTTAAAGAGTTTTTTAA
AGAAGAAGAATATCATAATAGTCAAGAAATAGATGATGTTGACAATAATATTATAAATCAGACAATTATAAAACAAAACC
TCTTTAACCTATACATTAGTAATAAAGATAACTTAGGCACAAAATTATTAGAAAATCGTCTAAGTGTTAAGATATTTTTA
AGTGAAATTTTTCAACAAGCTTGGGCAGGTACTTACTCAAATAAAGATTTTGATGAATTCATTTCTAAGCTAGACTTAGA
TAACTTAGAAAAACTACTATATCCAGCTAGAATAATAGAAGCTTGCAGAATCACAAGTATGTTACTCAAGTGTAATAGAT
TTAATATATGTGTATTAGAGAAAACATTAAAAGAATTTACTTTAAATATTAATACATTAGAAGTTTTATACACACTAAAT
ATACCTTTTTCTACTTTTTTCAGTAAGTTACATCATATAGGATCTAAGGCACCAGATTTTTTATATAAAATATTTAAGAT
TCTTGATATAATGATAAAAGTGCATAAAAATGCCGAAGAGCGTTTAATATCTTTCTACGCATTAGAACTGACATTAGCTA
GTGTGAAAGATAAGTGTCAAAAAGATCGTGAAAACATCATAAATAGGCTGCTAGAAAAATATAGCAATAGTCAAGAGCAA
AATAACTTAACAATCAATAATCATCAATCTCAGACAATAGATGGACACAGAGAAGATGATGATATTGAAACCAATAGTAA
TGAAATAAATACGCATAGTGATAGTCAAGAATTAGCGGCTAATATATCAAATTCTGAGCTAACAACTAATGAAATATTAA
ATAGAGCGCTAGCTATAGATGATAATGATATTAAAGAAATAGAACTGGACTTAAACAATGACATTACACATCAATTTGAA
AATCAATCACAGACAACAGATAAGTATCTAGAAAATGATAGAGAAGATATACTATATCAATCTATGAAAGCTATTGATGG
TACTACTTCAAGTAGTTCGAACAGTATATGTATTACTTCGTATCAGATTATGCCATCGGTAGAAGAAGTAGCGCAGCAAC
CTATGCAAGATGATATTCAGAACAGTAGTGATGAGATAAATACACATAGCGATGGTCAAGAGTTAACGGCTAACATGTCA
AATTCTGAGCTAACAACTGATGAAATATTCAATAGAATGCTAGATATAGATGATGATGATAATATTAAAGAAATAGTACT
GAAATTAAACAATTACATTGCCAATCAATCTGAAAATCAATCTCAACCAATAGAAAGCTATCAAGAAAATAATATTGAAA
ATTTGCAAATAATAAGAGAGACGCATACTGAAGAAGTTATGCAATCAGTAAAAAAGCGAAAATCATGTTATGATGAGCAT
GAAGATCTTTACACTCGTAAACGTCAGTGTAATAATCCTGCGTTAAATAGCGATCATGGCACAGAAGTAGCACTAAATGA
ACAAGATAGCATTAATGTAGATTGCTATACTTTTGGCACTATTAGTCATCTAGCCGGCGAATCGATTTGCATCCTTAGTA
GTGATACCGAAAGATTCATCATTACTGGTACAGCAGGGTATTCAGCTTCCATTTTGGAATAA

Upstream 100 bases:

>100_bases
ATTTTTTGAGCTTTTGTAAAAAATTTTCACAAAAATTTCATAGGATAACAAACAGTCAAAACCCACATATGAAGAAATAT
GTAAAATAAAAGAATATTTT

Downstream 100 bases:

>100_bases
GTATTACAAAAGATATCAGATTAAGTAAGAATTAATAATAACTCCAGTTTAGGACAATAAAAAGAGATGGAAAGTATCAG
GCAAAAGCTATACAAGAGAT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 553; Mature: 552

Protein sequence:

>553_residues
MSFCKKFSQKFHRITNSNIVKVKEFFKEEEYHNSQEIDDVDNNIINQTIIKQNLFNLYISNKDNLGTKLLENRLSVKIFL
SEIFQQAWAGTYSNKDFDEFISKLDLDNLEKLLYPARIIEACRITSMLLKCNRFNICVLEKTLKEFTLNINTLEVLYTLN
IPFSTFFSKLHHIGSKAPDFLYKIFKILDIMIKVHKNAEERLISFYALELTLASVKDKCQKDRENIINRLLEKYSNSQEQ
NNLTINNHQSQTIDGHREDDDIETNSNEINTHSDSQELAANISNSELTTNEILNRALAIDDNDIKEIELDLNNDITHQFE
NQSQTTDKYLENDREDILYQSMKAIDGTTSSSSNSICITSYQIMPSVEEVAQQPMQDDIQNSSDEINTHSDGQELTANMS
NSELTTDEIFNRMLDIDDDDNIKEIVLKLNNYIANQSENQSQPIESYQENNIENLQIIRETHTEEVMQSVKKRKSCYDEH
EDLYTRKRQCNNPALNSDHGTEVALNEQDSINVDCYTFGTISHLAGESICILSSDTERFIITGTAGYSASILE

Sequences:

>Translated_553_residues
MSFCKKFSQKFHRITNSNIVKVKEFFKEEEYHNSQEIDDVDNNIINQTIIKQNLFNLYISNKDNLGTKLLENRLSVKIFL
SEIFQQAWAGTYSNKDFDEFISKLDLDNLEKLLYPARIIEACRITSMLLKCNRFNICVLEKTLKEFTLNINTLEVLYTLN
IPFSTFFSKLHHIGSKAPDFLYKIFKILDIMIKVHKNAEERLISFYALELTLASVKDKCQKDRENIINRLLEKYSNSQEQ
NNLTINNHQSQTIDGHREDDDIETNSNEINTHSDSQELAANISNSELTTNEILNRALAIDDNDIKEIELDLNNDITHQFE
NQSQTTDKYLENDREDILYQSMKAIDGTTSSSSNSICITSYQIMPSVEEVAQQPMQDDIQNSSDEINTHSDGQELTANMS
NSELTTDEIFNRMLDIDDDDNIKEIVLKLNNYIANQSENQSQPIESYQENNIENLQIIRETHTEEVMQSVKKRKSCYDEH
EDLYTRKRQCNNPALNSDHGTEVALNEQDSINVDCYTFGTISHLAGESICILSSDTERFIITGTAGYSASILE
>Mature_552_residues
SFCKKFSQKFHRITNSNIVKVKEFFKEEEYHNSQEIDDVDNNIINQTIIKQNLFNLYISNKDNLGTKLLENRLSVKIFLS
EIFQQAWAGTYSNKDFDEFISKLDLDNLEKLLYPARIIEACRITSMLLKCNRFNICVLEKTLKEFTLNINTLEVLYTLNI
PFSTFFSKLHHIGSKAPDFLYKIFKILDIMIKVHKNAEERLISFYALELTLASVKDKCQKDRENIINRLLEKYSNSQEQN
NLTINNHQSQTIDGHREDDDIETNSNEINTHSDSQELAANISNSELTTNEILNRALAIDDNDIKEIELDLNNDITHQFEN
QSQTTDKYLENDREDILYQSMKAIDGTTSSSSNSICITSYQIMPSVEEVAQQPMQDDIQNSSDEINTHSDGQELTANMSN
SELTTDEIFNRMLDIDDDDNIKEIVLKLNNYIANQSENQSQPIESYQENNIENLQIIRETHTEEVMQSVKKRKSCYDEHE
DLYTRKRQCNNPALNSDHGTEVALNEQDSINVDCYTFGTISHLAGESICILSSDTERFIITGTAGYSASILE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 63759; Mature: 63627

Theoretical pI: Translated: 4.40; Mature: 4.40

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSFCKKFSQKFHRITNSNIVKVKEFFKEEEYHNSQEIDDVDNNIINQTIIKQNLFNLYIS
CCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHEEEC
NKDNLGTKLLENRLSVKIFLSEIFQQAWAGTYSNKDFDEFISKLDLDNLEKLLYPARIIE
CCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHCHHHHHHHHHHHHHHH
ACRITSMLLKCNRFNICVLEKTLKEFTLNINTLEVLYTLNIPFSTFFSKLHHIGSKAPDF
HHHHHHHHHHCCCCCEEHHHHHHHHHHCCCEEEEEEEEECCCHHHHHHHHHHHCCCCHHH
LYKIFKILDIMIKVHKNAEERLISFYALELTLASVKDKCQKDRENIINRLLEKYSNSQEQ
HHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHH
NNLTINNHQSQTIDGHREDDDIETNSNEINTHSDSQELAANISNSELTTNEILNRALAID
CCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCHHHHHHHHHCCC
DNDIKEIELDLNNDITHQFENQSQTTDKYLENDREDILYQSMKAIDGTTSSSSNSICITS
CCCCEEEEEECCCCHHHHHCCCCHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCCCEEEEE
YQIMPSVEEVAQQPMQDDIQNSSDEINTHSDGQELTANMSNSELTTDEIFNRMLDIDDDD
EECCCCHHHHHHCCHHHHHCCCCCCCCCCCCCHHHCCCCCCCCCCHHHHHHHHCCCCCCC
NIKEIVLKLNNYIANQSENQSQPIESYQENNIENLQIIRETHTEEVMQSVKKRKSCYDEH
CHHHHHHHHHHHHCCCCCCCCCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
EDLYTRKRQCNNPALNSDHGTEVALNEQDSINVDCYTFGTISHLAGESICILSSDTERFI
HHHHHHHHHCCCCCCCCCCCCEEEECCCCCCCEEEEECCHHHHHCCCEEEEEECCCCEEE
ITGTAGYSASILE
EEECCCCCCCCCC
>Mature Secondary Structure 
SFCKKFSQKFHRITNSNIVKVKEFFKEEEYHNSQEIDDVDNNIINQTIIKQNLFNLYIS
CHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHEEEC
NKDNLGTKLLENRLSVKIFLSEIFQQAWAGTYSNKDFDEFISKLDLDNLEKLLYPARIIE
CCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHCHHHHHHHHHHHHHHH
ACRITSMLLKCNRFNICVLEKTLKEFTLNINTLEVLYTLNIPFSTFFSKLHHIGSKAPDF
HHHHHHHHHHCCCCCEEHHHHHHHHHHCCCEEEEEEEEECCCHHHHHHHHHHHCCCCHHH
LYKIFKILDIMIKVHKNAEERLISFYALELTLASVKDKCQKDRENIINRLLEKYSNSQEQ
HHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHH
NNLTINNHQSQTIDGHREDDDIETNSNEINTHSDSQELAANISNSELTTNEILNRALAID
CCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCHHHHHHHHHCCC
DNDIKEIELDLNNDITHQFENQSQTTDKYLENDREDILYQSMKAIDGTTSSSSNSICITS
CCCCEEEEEECCCCHHHHHCCCCHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCCCEEEEE
YQIMPSVEEVAQQPMQDDIQNSSDEINTHSDGQELTANMSNSELTTDEIFNRMLDIDDDD
EECCCCHHHHHHCCHHHHHCCCCCCCCCCCCCHHHCCCCCCCCCCHHHHHHHHCCCCCCC
NIKEIVLKLNNYIANQSENQSQPIESYQENNIENLQIIRETHTEEVMQSVKKRKSCYDEH
CHHHHHHHHHHHHCCCCCCCCCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
EDLYTRKRQCNNPALNSDHGTEVALNEQDSINVDCYTFGTISHLAGESICILSSDTERFI
HHHHHHHHHCCCCCCCCCCCCEEEECCCCCCCEEEEECCHHHHHCCCEEEEEECCCCEEE
ITGTAGYSASILE
EEECCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA