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The map label for this gene is tpF1

Identifier: 189026261

GI number: 189026261

Start: 1136255

End: 1136788

Strand: Reverse

Name: tpF1

Synonym: TPASS_1038

Alternate gene names: 189026261

Gene position: 1136788-1136255 (Counterclockwise)

Preceding gene: 189026263

Following gene: 189026260

Centisome position: 99.77

GC content: 50.75

Gene sequence:

>534_bases
ATGAACATGTGTACAGATGGAAAAAAATACCACAGCACCGCCACGAGCGCTGCAGTTGGAGCCAGCGCCCCCGGTGTACC
GGACGCTCGTGCCATTGCTGCTATCTGCGAGCAATTGCGCCAGCATGTAGCGGATCTGGGAGTACTGTATATCAAGCTAC
ATAACTATCACTGGCACATCTACGGCATTGAGTTTAAACAGGTGCATGAGCTCCTTGAAGAGTATTATGTATCAGTTACT
GAAGCCTTTGATACGATTGCCGAGCGGTTGTTACAGCTGGGCGCGCAGGCTCCTGCGTCTATGGCTGAATACCTTGCGTT
GAGTGGAATTGCAGAAGAGACGGAGAAAGAGATCACTATCGTCTCTGCGCTTGCGCGCGTAAAGCGGGATTTTGAATACC
TAAGTACGCGATTCAGCCAAACGCAAGTACTTGCAGCTGAAAGTGGGGATGCAGTGACTGACGGCATTATCACAGACATA
CTGAGGACGTTGGGAAAGGCCATTTGGATGCTTGGTGCTACCCTGAAAGCCTAG

Upstream 100 bases:

>100_bases
AAAAAGCCGGGAAAAGTCCAAAAAGACAGTGGTTATGCTCCATTTCTTTCGATTTTTTGTTGGCATGGTTTTTGCTTTAA
AGTTTGGAGGAGAAAGAACG

Downstream 100 bases:

>100_bases
GTAGAGCAGGCTGTACGTACAACACACGTACGGCCATGCGCTGGAAGTCCTGTATTTTGCACATAAGGCCTCTCTCCCGT
TACAGCATGAGGGGAGGGAG

Product: bacterioferrin TpF1

Products: NA

Alternate protein names: Antigen 4D; Antigen C1-5

Number of amino acids: Translated: 177; Mature: 177

Protein sequence:

>177_residues
MNMCTDGKKYHSTATSAAVGASAPGVPDARAIAAICEQLRQHVADLGVLYIKLHNYHWHIYGIEFKQVHELLEEYYVSVT
EAFDTIAERLLQLGAQAPASMAEYLALSGIAEETEKEITIVSALARVKRDFEYLSTRFSQTQVLAAESGDAVTDGIITDI
LRTLGKAIWMLGATLKA

Sequences:

>Translated_177_residues
MNMCTDGKKYHSTATSAAVGASAPGVPDARAIAAICEQLRQHVADLGVLYIKLHNYHWHIYGIEFKQVHELLEEYYVSVT
EAFDTIAERLLQLGAQAPASMAEYLALSGIAEETEKEITIVSALARVKRDFEYLSTRFSQTQVLAAESGDAVTDGIITDI
LRTLGKAIWMLGATLKA
>Mature_177_residues
MNMCTDGKKYHSTATSAAVGASAPGVPDARAIAAICEQLRQHVADLGVLYIKLHNYHWHIYGIEFKQVHELLEEYYVSVT
EAFDTIAERLLQLGAQAPASMAEYLALSGIAEETEKEITIVSALARVKRDFEYLSTRFSQTQVLAAESGDAVTDGIITDI
LRTLGKAIWMLGATLKA

Specific function: May play an important structural role in the outer membrane

COG id: COG0783

COG function: function code P; DNA-binding ferritin-like protein (oxidative damage protectant)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the dps family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): TPF1_TREPA (P16665)

Other databases:

- EMBL:   M32401
- EMBL:   AE000520
- PIR:   JS0097
- RefSeq:   NP_219475.1
- PDB:   2FJC
- PDBsum:   2FJC
- ProteinModelPortal:   P16665
- SMR:   P16665
- IntAct:   P16665
- GeneID:   2610937
- GenomeReviews:   AE000520_GR
- KEGG:   tpa:TP1038
- NMPDR:   fig|243276.1.peg.1033
- TIGR:   TP_1038
- HOGENOM:   HBG672882
- OMA:   HTLHVKL
- ProtClustDB:   CLSK2300356
- BioCyc:   TPAL243276:TP_1038-MONOMER
- InterPro:   IPR002177
- InterPro:   IPR023188
- InterPro:   IPR012347
- InterPro:   IPR009078
- InterPro:   IPR008331
- Gene3D:   G3DSA:1.20.1260.10
- PIRSF:   PIRSF005900
- PRINTS:   PR01346

Pfam domain/function: PF00210 Ferritin; SSF47240 Ferritin/RR_like

EC number: NA

Molecular weight: Translated: 19361; Mature: 19361

Theoretical pI: Translated: 5.24; Mature: 5.24

Prosite motif: PS00818 DPS_1; PS00819 DPS_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNMCTDGKKYHSTATSAAVGASAPGVPDARAIAAICEQLRQHVADLGVLYIKLHNYHWHI
CCCCCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHEEEEECCEEEE
YGIEFKQVHELLEEYYVSVTEAFDTIAERLLQLGAQAPASMAEYLALSGIAEETEKEITI
EECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHH
VSALARVKRDFEYLSTRFSQTQVLAAESGDAVTDGIITDILRTLGKAIWMLGATLKA
HHHHHHHHHHHHHHHHHHHHHHEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MNMCTDGKKYHSTATSAAVGASAPGVPDARAIAAICEQLRQHVADLGVLYIKLHNYHWHI
CCCCCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHEEEEECCEEEE
YGIEFKQVHELLEEYYVSVTEAFDTIAERLLQLGAQAPASMAEYLALSGIAEETEKEITI
EECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHH
VSALARVKRDFEYLSTRFSQTQVLAAESGDAVTDGIITDILRTLGKAIWMLGATLKA
HHHHHHHHHHHHHHHHHHHHHHEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 2471912; 2643579; 9665876; 3549683