Definition | Treponema pallidum subsp. pallidum SS14, complete genome. |
---|---|
Accession | NC_010741 |
Length | 1,139,457 |
Click here to switch to the map view.
The map label for this gene is 189026090
Identifier: 189026090
GI number: 189026090
Start: 948246
End: 948431
Strand: Reverse
Name: 189026090
Synonym: TPASS_0867
Alternate gene names: NA
Gene position: 948431-948246 (Counterclockwise)
Preceding gene: 189026094
Following gene: 189026089
Centisome position: 83.24
GC content: 57.53
Gene sequence:
>186_bases GTGCGTTGGCTATGCAGGTTGATCGGCTATCGTTATGGGTATGCGGTATGCGGCGGCTACCGTAGGCAGGGTGGCAGGTG TAGCGCCCAGCTCCATGCACAGTACACGCGTGCATCGCACTGCGTCCTGCGCATCGCATGGGAGGTAAACGGTGCAGATT ATGAGCTTTTCCGCCTTTGGATATGA
Upstream 100 bases:
>100_bases CGAGAGCAGAAACGGGCCAGTCCTATTTTCGGAAAAACGGAAAAGGACTTGAGGTTTTTTTCGCCTTTTTTGTTACGTTC CTTGGTAGGTACGTCCGGGT
Downstream 100 bases:
>100_bases AGGCGAGGTCATAAAGGTGGAAGTGGATCTTCGGAGGGGACTGCCGGTAGTGGATATTGTGGGACTGCCAGGGTCTGCGG TTAAAGAAGCGAAGGAGCGG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 61; Mature: 61
Protein sequence:
>61_residues MRWLCRLIGYRYGYAVCGGYRRQGGRCSAQLHAQYTRASHCVLRIAWEVNGADYELFRLWI
Sequences:
>Translated_61_residues MRWLCRLIGYRYGYAVCGGYRRQGGRCSAQLHAQYTRASHCVLRIAWEVNGADYELFRLWI >Mature_61_residues MRWLCRLIGYRYGYAVCGGYRRQGGRCSAQLHAQYTRASHCVLRIAWEVNGADYELFRLWI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 7215; Mature: 7215
Theoretical pI: Translated: 9.58; Mature: 9.58
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
6.6 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 8.2 %Cys+Met (Translated Protein) 6.6 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 8.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRWLCRLIGYRYGYAVCGGYRRQGGRCSAQLHAQYTRASHCVLRIAWEVNGADYELFRLW CHHHHHHHHHHCCCEECCCCCCCCCCCEEEEHHHHCCCCEEEEEEEEEECCCCEEEEEEE I C >Mature Secondary Structure MRWLCRLIGYRYGYAVCGGYRRQGGRCSAQLHAQYTRASHCVLRIAWEVNGADYELFRLW CHHHHHHHHHHCCCEECCCCCCCCCCCEEEEHHHHCCCCEEEEEEEEEECCCCEEEEEEE I C
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9665876 [H]