Click here to switch to the map view.

The map label for this gene is 189026089

Identifier: 189026089

GI number: 189026089

Start: 944811

End: 946253

Strand: Reverse

Name: 189026089

Synonym: TPASS_0865

Alternate gene names: NA

Gene position: 946253-944811 (Counterclockwise)

Preceding gene: 189026090

Following gene: 189026088

Centisome position: 83.04

GC content: 54.33

Gene sequence:

>1443_bases
GTGGTACGGATGAGGCGGAGAAGAGCTTGTTCAAGCGGTGGCGCGTGCGGATGTGCTGCGGTGCGCGGTGCGCGCAGCTT
TCTATCAGTTCGGGTTCTGGGGATGCGTATTGGGATGTCTGCCTTGTGTCTTGCCCCGCTTTTTGCGCGGACAGCTTCTT
TGGGCGCGTGGTCTTCGCAAGGGGGTGAAGTTCTGGGGGAAGTTCGCGCACGAGTGCCGGCGCACCGCAGGGTGCGGCGT
GCCGTGTCTGGAACGTCCGTGACGCCGGTTGTTGCAATGGCAGCAAAGACATCCGAGAAGCAGAAGGGAGTGGGCCGTCG
TGCCCTCTCGCTGAGGACAGGCGGCAGATATGAAATGCTCGGCTTGGCATTTACCGCTTTAGCAGACGATGCAAGTTTTT
TTGAGGCGAATGCAGCAGGGAGTGCCGCGTTCCCCTATCTCCTGGTGGGAGGGTTTCACTTTGCCCGGGTTAATCAATCG
CACACAGATACGATTGCACTTGTGCACAGCATAGGACGGACCGGCTACGGTTTTTCTGCGAGTGTTCAGTATCCCTACCT
GACAATGGAGGGAAAGACAGTAGGCGGCGTTGCCATTTTCAATGTGGCGCACCGTTTTTTGTCTGCCTATCGTTTTAAAG
GCATCAGTGTGGGAACCAACGTGAAAGTTGGCTACCGCGATTCTTCAGCCGGCGGGGAGAGGAATAAAAAAAACAACCAG
GGGGGTAAGAAGCACGTGGTGGTGACCGCAGACATCGGTCTGCAGGGGACGTGGTCGGTGGCCAAGAATTTTGGTTCCCA
TGAGCCGAATCTGTGGGTGGGCGGTACTGTCAAAAACGTTGGACTTTCAGTTGAGGTGGACGCATCCAACAGCGGTTCTA
GCATGAGTGGCGGCAGGACGGTGCACGCTACAAACTCGAGTTTTATTCTCGCATGTGCGTATCAACCGATACGGTGGTTT
CTCTTTGGCACGGGGATTGAGTGGAAGTACAACGTGCAAGAATTTGCAGACAACAATAGATTCAGATACGGCGTAGCGTT
CCTGCTCCTGCCGGTGCAGTACGTTGCGTTTGGCTCAAATGTGTTTCTCACCGGGCTCGCCTCAGATATCCGTGCAAATG
CAGGAGTAGAATTCAAAAGTACGTGGGTGCGTGTGGATCTCACATACACCTATGAGTCAGACAAGGATGAGCATGTCATT
TCCTGCGGAATTGCAGGATTTTTTAATCGAGACCGACGCAAGCACTTGGAAAAGGAAGTATACACTTCATACCTGCGGGG
GCTGCGTCACTATGATGCGCAGCACTATGAGGAAGCGATTGCCGAATGGCGCCGCACCCTGCAGCGTGCCGGTAGCTTTG
AGCCGGCGCGAGAAGGTATCGAGCGTGCAACGAAGCTTTTGCAATTAAACCGGCAGGTTTACGATTTTCATTTTCTTCAC
TGA

Upstream 100 bases:

>100_bases
TTCTCTGACGTAATCGGGGCACTGGTAGGGGCGCAGCGTATGGGAAAGGGAAGGGACTGTGCGCAAGGGTTGCACGGAGC
GGATGCGGTGAGGTAGTCTA

Downstream 100 bases:

>100_bases
ACTCTGCTTTATCGGGAAAGACACCCTCGGCGGTTGCGCCCGGCGAGGTGTGTTCTTTATACGGGGCGTGCGCCGTGCGG
TTCAAAAACAAGTGGCACGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 480; Mature: 480

Protein sequence:

>480_residues
MVRMRRRRACSSGGACGCAAVRGARSFLSVRVLGMRIGMSALCLAPLFARTASLGAWSSQGGEVLGEVRARVPAHRRVRR
AVSGTSVTPVVAMAAKTSEKQKGVGRRALSLRTGGRYEMLGLAFTALADDASFFEANAAGSAAFPYLLVGGFHFARVNQS
HTDTIALVHSIGRTGYGFSASVQYPYLTMEGKTVGGVAIFNVAHRFLSAYRFKGISVGTNVKVGYRDSSAGGERNKKNNQ
GGKKHVVVTADIGLQGTWSVAKNFGSHEPNLWVGGTVKNVGLSVEVDASNSGSSMSGGRTVHATNSSFILACAYQPIRWF
LFGTGIEWKYNVQEFADNNRFRYGVAFLLLPVQYVAFGSNVFLTGLASDIRANAGVEFKSTWVRVDLTYTYESDKDEHVI
SCGIAGFFNRDRRKHLEKEVYTSYLRGLRHYDAQHYEEAIAEWRRTLQRAGSFEPAREGIERATKLLQLNRQVYDFHFLH

Sequences:

>Translated_480_residues
MVRMRRRRACSSGGACGCAAVRGARSFLSVRVLGMRIGMSALCLAPLFARTASLGAWSSQGGEVLGEVRARVPAHRRVRR
AVSGTSVTPVVAMAAKTSEKQKGVGRRALSLRTGGRYEMLGLAFTALADDASFFEANAAGSAAFPYLLVGGFHFARVNQS
HTDTIALVHSIGRTGYGFSASVQYPYLTMEGKTVGGVAIFNVAHRFLSAYRFKGISVGTNVKVGYRDSSAGGERNKKNNQ
GGKKHVVVTADIGLQGTWSVAKNFGSHEPNLWVGGTVKNVGLSVEVDASNSGSSMSGGRTVHATNSSFILACAYQPIRWF
LFGTGIEWKYNVQEFADNNRFRYGVAFLLLPVQYVAFGSNVFLTGLASDIRANAGVEFKSTWVRVDLTYTYESDKDEHVI
SCGIAGFFNRDRRKHLEKEVYTSYLRGLRHYDAQHYEEAIAEWRRTLQRAGSFEPAREGIERATKLLQLNRQVYDFHFLH
>Mature_480_residues
MVRMRRRRACSSGGACGCAAVRGARSFLSVRVLGMRIGMSALCLAPLFARTASLGAWSSQGGEVLGEVRARVPAHRRVRR
AVSGTSVTPVVAMAAKTSEKQKGVGRRALSLRTGGRYEMLGLAFTALADDASFFEANAAGSAAFPYLLVGGFHFARVNQS
HTDTIALVHSIGRTGYGFSASVQYPYLTMEGKTVGGVAIFNVAHRFLSAYRFKGISVGTNVKVGYRDSSAGGERNKKNNQ
GGKKHVVVTADIGLQGTWSVAKNFGSHEPNLWVGGTVKNVGLSVEVDASNSGSSMSGGRTVHATNSSFILACAYQPIRWF
LFGTGIEWKYNVQEFADNNRFRYGVAFLLLPVQYVAFGSNVFLTGLASDIRANAGVEFKSTWVRVDLTYTYESDKDEHVI
SCGIAGFFNRDRRKHLEKEVYTSYLRGLRHYDAQHYEEAIAEWRRTLQRAGSFEPAREGIERATKLLQLNRQVYDFHFLH

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0164 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005362 [H]

Pfam domain/function: PF03687 UPF0164 [H]

EC number: NA

Molecular weight: Translated: 52610; Mature: 52610

Theoretical pI: Translated: 10.43; Mature: 10.43

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVRMRRRRACSSGGACGCAAVRGARSFLSVRVLGMRIGMSALCLAPLFARTASLGAWSSQ
CCCCCHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHCCCCCCCC
GGEVLGEVRARVPAHRRVRRAVSGTSVTPVVAMAAKTSEKQKGVGRRALSLRTGGRYEML
CHHHHHHHHHCCCHHHHHHHHHCCCCCCHHHHHHHHCCHHHHCCCCEEEEEECCCCEEHH
GLAFTALADDASFFEANAAGSAAFPYLLVGGFHFARVNQSHTDTIALVHSIGRTGYGFSA
HHHHHHHHCCCHHHCCCCCCCCCCCHHHHCCEEEEECCCCCCHHHHHHHHHCCCCCCCEE
SVQYPYLTMEGKTVGGVAIFNVAHRFLSAYRFKGISVGTNVKVGYRDSSAGGERNKKNNQ
EEECCEEEECCCCCCCHHHHHHHHHHHHHHHCCCEEECCCEEEEECCCCCCCCCCCCCCC
GGKKHVVVTADIGLQGTWSVAKNFGSHEPNLWVGGTVKNVGLSVEVDASNSGSSMSGGRT
CCCEEEEEEECCCCCCCHHHHHCCCCCCCCEEECCEEECCCEEEEEECCCCCCCCCCCEE
VHATNSSFILACAYQPIRWFLFGTGIEWKYNVQEFADNNRFRYGVAFLLLPVQYVAFGSN
EEECCCCEEEEEECCCEEEEEEECCCCEEECHHHHCCCCCEEHHHHHHHHHHHHHHCCCC
VFLTGLASDIRANAGVEFKSTWVRVDLTYTYESDKDEHVISCGIAGFFNRDRRKHLEKEV
EEEEECHHHHHCCCCCEEEEEEEEEEEEEEECCCCCCEEEEECHHHHHCHHHHHHHHHHH
YTSYLRGLRHYDAQHYEEAIAEWRRTLQRAGSFEPAREGIERATKLLQLNRQVYDFHFLH
HHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHEEEECC
>Mature Secondary Structure
MVRMRRRRACSSGGACGCAAVRGARSFLSVRVLGMRIGMSALCLAPLFARTASLGAWSSQ
CCCCCHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHCCCCCCCC
GGEVLGEVRARVPAHRRVRRAVSGTSVTPVVAMAAKTSEKQKGVGRRALSLRTGGRYEML
CHHHHHHHHHCCCHHHHHHHHHCCCCCCHHHHHHHHCCHHHHCCCCEEEEEECCCCEEHH
GLAFTALADDASFFEANAAGSAAFPYLLVGGFHFARVNQSHTDTIALVHSIGRTGYGFSA
HHHHHHHHCCCHHHCCCCCCCCCCCHHHHCCEEEEECCCCCCHHHHHHHHHCCCCCCCEE
SVQYPYLTMEGKTVGGVAIFNVAHRFLSAYRFKGISVGTNVKVGYRDSSAGGERNKKNNQ
EEECCEEEECCCCCCCHHHHHHHHHHHHHHHCCCEEECCCEEEEECCCCCCCCCCCCCCC
GGKKHVVVTADIGLQGTWSVAKNFGSHEPNLWVGGTVKNVGLSVEVDASNSGSSMSGGRT
CCCEEEEEEECCCCCCCHHHHHCCCCCCCCEEECCEEECCCEEEEEECCCCCCCCCCCEE
VHATNSSFILACAYQPIRWFLFGTGIEWKYNVQEFADNNRFRYGVAFLLLPVQYVAFGSN
EEECCCCEEEEEECCCEEEEEEECCCCEEECHHHHCCCCCEEHHHHHHHHHHHHHHCCCC
VFLTGLASDIRANAGVEFKSTWVRVDLTYTYESDKDEHVISCGIAGFFNRDRRKHLEKEV
EEEEECHHHHHCCCCCEEEEEEEEEEEEEEECCCCCCEEEEECHHHHHCHHHHHHHHHHH
YTSYLRGLRHYDAQHYEEAIAEWRRTLQRAGSFEPAREGIERATKLLQLNRQVYDFHFLH
HHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9665876 [H]