Click here to switch to the map view.

The map label for this gene is 189026094

Identifier: 189026094

GI number: 189026094

Start: 950650

End: 950811

Strand: Reverse

Name: 189026094

Synonym: TPASS_0871

Alternate gene names: NA

Gene position: 950811-950650 (Counterclockwise)

Preceding gene: 189026101

Following gene: 189026090

Centisome position: 83.44

GC content: 46.3

Gene sequence:

>162_bases
TTGTCGGCTTACAGATACGCAAACTTAACAAATACAAAGTACATCCCCAGCGTTTACGCCGTAATGGCAACCGCAGGGTG
TGATGACAGAAAGATAAAGAGAAAAGAAAAGGGAAAGAGGCATGCGGCTCCTCTTTCCCTCATGGGCGTTCACAAGAGAT
GA

Upstream 100 bases:

>100_bases
CTCCGGGGATGCGGACATCAGACACAATGACTCCTCGAAAGCTGCGGAGAGTGGATCAAGACTCCAGCCGAGTTCCCTTC
AAAAAAACCCCACGCGCGGC

Downstream 100 bases:

>100_bases
CATCCGAAACTCTCTAATGAAGACGCTGAACGTTTAAAAATATACCGTCGCGATATGCGCTTACTGCATCAAGCGGAGCA
CTGCCTGTGGCTGTGTATTT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 53; Mature: 52

Protein sequence:

>53_residues
MSAYRYANLTNTKYIPSVYAVMATAGCDDRKIKRKEKGKRHAAPLSLMGVHKR

Sequences:

>Translated_53_residues
MSAYRYANLTNTKYIPSVYAVMATAGCDDRKIKRKEKGKRHAAPLSLMGVHKR
>Mature_52_residues
SAYRYANLTNTKYIPSVYAVMATAGCDDRKIKRKEKGKRHAAPLSLMGVHKR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y871_TREPA (O83841)

Other databases:

- EMBL:   AE000520
- PIR:   E71270
- RefSeq:   NP_219306.1
- ProteinModelPortal:   O83841
- GeneID:   2611113
- GenomeReviews:   AE000520_GR
- KEGG:   tpa:TP0871
- NMPDR:   fig|243276.1.peg.865
- TIGR:   TP_0871
- HOGENOM:   HBG732141
- ProtClustDB:   CLSK2300323
- BioCyc:   TPAL243276:TP_0871-MONOMER

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 5998; Mature: 5867

Theoretical pI: Translated: 10.81; Mature: 10.81

Prosite motif: PS51257 PROKAR_LIPOPROTEIN; PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
5.7 %Met     (Translated Protein)
7.5 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
5.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSAYRYANLTNTKYIPSVYAVMATAGCDDRKIKRKEKGKRHAAPLSLMGVHKR
CCCCCCCCCCCCCCCHHHHHHHHHCCCCCCHHHHHHCCCCCCCCCCEECCCCC
>Mature Secondary Structure 
SAYRYANLTNTKYIPSVYAVMATAGCDDRKIKRKEKGKRHAAPLSLMGVHKR
CCCCCCCCCCCCCCHHHHHHHHHCCCCCCHHHHHHCCCCCCCCCCEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9665876