Definition | Treponema pallidum subsp. pallidum SS14, complete genome. |
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Accession | NC_010741 |
Length | 1,139,457 |
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The map label for this gene is 189025402
Identifier: 189025402
GI number: 189025402
Start: 191173
End: 191271
Strand: Direct
Name: 189025402
Synonym: TPASS_0169
Alternate gene names: NA
Gene position: 191173-191271 (Clockwise)
Preceding gene: 189025401
Following gene: 189025403
Centisome position: 16.78
GC content: 55.56
Gene sequence:
>99_bases TTGTGGTCGGGGCTTTTTCCTGACCTTCAAGGGACAGCTTTTTTCCGTGCCTGGGTTGCGAGTGCGCGTTTTCGTGTTTT TCACGGGGAGGGTGCGTGA
Upstream 100 bases:
>100_bases ACCGCAGGGTGGAGCAGTTGGCAGCTCGTCGGGCTCATAACCCGGAGGCCGGAGGTTCGAGTCCTCTCCCTGCTATATTC CGTTCATTTATCGGTGTGCC
Downstream 100 bases:
>100_bases CGGTCGGCGTTTTTGCTGCACTGGGAGAGGAGGTTGCGCGCGTACGTGAGTGTCTCGGGGGAGTAGGTACAGAGCGGGCA GGGCTCACGTTCTATGTTGT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 32; Mature: 32
Protein sequence:
>32_residues MWSGLFPDLQGTAFFRAWVASARFRVFHGEGA
Sequences:
>Translated_32_residues MWSGLFPDLQGTAFFRAWVASARFRVFHGEGA >Mature_32_residues MWSGLFPDLQGTAFFRAWVASARFRVFHGEGA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): Y169_TREPA (O83199)
Other databases:
- EMBL: AE000520 - PIR: F71357 - RefSeq: NP_218608.1 - GeneID: 2611346 - GenomeReviews: AE000520_GR - KEGG: tpa:TP0169 - NMPDR: fig|243276.1.peg.167 - TIGR: TP_0169 - HOGENOM: HBG731920 - ProtClustDB: CLSK2300151 - BioCyc: TPAL243276:TP_0169-MONOMER
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 3616; Mature: 3616
Theoretical pI: Translated: 10.31; Mature: 10.31
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MWSGLFPDLQGTAFFRAWVASARFRVFHGEGA CCCCCCCCCCCHHHHHHHHHCCCEEEEECCCC >Mature Secondary Structure MWSGLFPDLQGTAFFRAWVASARFRVFHGEGA CCCCCCCCCCCHHHHHHHHHCCCEEEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9665876