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The map label for this gene is troD [H]

Identifier: 189025399

GI number: 189025399

Start: 188540

End: 189643

Strand: Direct

Name: troD [H]

Synonym: TPASS_0166

Alternate gene names: 189025399

Gene position: 188540-189643 (Clockwise)

Preceding gene: 189025398

Following gene: 189025400

Centisome position: 16.55

GC content: 52.31

Gene sequence:

>1104_bases
ATGACCATGGAGGTTGTGCTTATTGCAGTGGTCGTGTCGGTTGCGTGCGCGCTGTGTGGGGTTTTCTTAGTGTTGCGTAG
AATATCGCTGATGAGTGACGCGATCAGTCATTCGGTTATCCTGGGGATAGTACTCGGTTATTTTCTGAGTCGTACGCTTT
CTTCTTTCGTGCCTTTTGTGGGGGCAGTGATTGCGGGGATATGTTCGGTAATCTGTGCAGAACTTTTGCAGAAGACAGGG
ATGGTAAAGAGCGATGCAGCAGTCGGGCTTGTGTTCCCTGCAATGTTTGGGTTGGGGGTGATCCTTGTGTCGTTGTATGC
AGGGAATGTACATCTTGATACAGATGCGGTACTGCTTGGGGAAATTGGACTTGCGCCCTTGGATAGGGTTTCGTTTTTTG
CTTGGTCCTTGCCTAGGAGTCTGGTACAGATGGGGTCCGTCTTGTGTGGATTACTGCTGTTGCTTGCGCTCTTTTTCAAG
GAACTCAAGATTTCTACGTTTGATCCGGTGCTTGCCACGAGTTTGGGTTTTTCTCCTACGCTTATTAATTATGGGCTTAT
GCTCGCGGTGAGTATTACCTGTGTGGGAGCCTTCGATTCGGTGGGTGCAGTGTTGGTCATTGCATTGATGATTACACCGC
CTGCAGCAGCGCTTTTGTTGACAGATAACTTGTTGTTGATGTTGGTCCTTGCTTCATTGCTCGCCTCTTGTGCGTCCATT
AGTGGGCTTTTTCTTGCGGTGAAGATAGACGGCAGCATTGCAGGAGCAATGGCTACCATGGCGGGCGTTCTGTTCGCGTT
GGTGTACCTTTTCTCTCCAAAACACGGGGTTGTGCGCAGGTGTCTGGTAATGCGTGCTTTGAAACTTGATCTAGATGTGG
TGACACTTGCCGTGCATCTTGCAACACACCGTTACACGGTGGAGCGCAGCGWGGAGTGCGCTGAAGTGCACCTGACAGAA
CATGTGAGTTGGTCTGCGCGCAGGGCGGCCCGCGTGGTGCGTACCGCGCTCAGGCGAGGGATGGTAGAGCGTCACGGTGC
CTTGCTGCTACTCACTGCGCAGGGTGTGTCGCTCGCGCAGGCGCGATTGGATGTATCCGTGTAG

Upstream 100 bases:

>100_bases
TATTGCGCTTGTCTCTATTATGCTTGGTCCTCAGCGGGGTGTTTTGTATCAACTGTGGCGGAGAAGACGGGTTTCGCTTC
TTCAAGAGGAGGGGTAGAAT

Downstream 100 bases:

>100_bases
GCTGAGTCGATGTCGTTAGTGTCAGATATTGCAGCAGAGAATTATTTGAAGACAGTGGTAAAGGCGTTGGCGCGGTCTCG
TCGGGAGCGCGTGGGTACCG

Product: ABC transporter, permease protein

Products: Zn (II) [Cytoplasm]; ADP; phosphate [C]

Alternate protein names: NA

Number of amino acids: Translated: 367; Mature: 366

Protein sequence:

>367_residues
MTMEVVLIAVVVSVACALCGVFLVLRRISLMSDAISHSVILGIVLGYFLSRTLSSFVPFVGAVIAGICSVICAELLQKTG
MVKSDAAVGLVFPAMFGLGVILVSLYAGNVHLDTDAVLLGEIGLAPLDRVSFFAWSLPRSLVQMGSVLCGLLLLLALFFK
ELKISTFDPVLATSLGFSPTLINYGLMLAVSITCVGAFDSVGAVLVIALMITPPAAALLLTDNLLLMLVLASLLASCASI
SGLFLAVKIDGSIAGAMATMAGVLFALVYLFSPKHGVVRRCLVMRALKLDLDVVTLAVHLATHRYTVERSXECAEVHLTE
HVSWSARRAARVVRTALRRGMVERHGALLLLTAQGVSLAQARLDVSV

Sequences:

>Translated_367_residues
MTMEVVLIAVVVSVACALCGVFLVLRRISLMSDAISHSVILGIVLGYFLSRTLSSFVPFVGAVIAGICSVICAELLQKTG
MVKSDAAVGLVFPAMFGLGVILVSLYAGNVHLDTDAVLLGEIGLAPLDRVSFFAWSLPRSLVQMGSVLCGLLLLLALFFK
ELKISTFDPVLATSLGFSPTLINYGLMLAVSITCVGAFDSVGAVLVIALMITPPAAALLLTDNLLLMLVLASLLASCASI
SGLFLAVKIDGSIAGAMATMAGVLFALVYLFSPKHGVVRRCLVMRALKLDLDVVTLAVHLATHRYTVERSXECAEVHLTE
HVSWSARRAARVVRTALRRGMVERHGALLLLTAQGVSLAQARLDVSV
>Mature_366_residues
TMEVVLIAVVVSVACALCGVFLVLRRISLMSDAISHSVILGIVLGYFLSRTLSSFVPFVGAVIAGICSVICAELLQKTGM
VKSDAAVGLVFPAMFGLGVILVSLYAGNVHLDTDAVLLGEIGLAPLDRVSFFAWSLPRSLVQMGSVLCGLLLLLALFFKE
LKISTFDPVLATSLGFSPTLINYGLMLAVSITCVGAFDSVGAVLVIALMITPPAAALLLTDNLLLMLVLASLLASCASIS
GLFLAVKIDGSIAGAMATMAGVLFALVYLFSPKHGVVRRCLVMRALKLDLDVVTLAVHLATHRYTVERSXECAEVHLTEH
VSWSARRAARVVRTALRRGMVERHGALLLLTAQGVSLAQARLDVSV

Specific function: Part of an ATP-driven transport system troABCD for zinc [H]

COG id: COG1108

COG function: function code P; ABC-type Mn2+/Zn2+ transport systems, permease components

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ABC-3 integral membrane protein family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001626 [H]

Pfam domain/function: PF00950 ABC-3 [H]

EC number: NA

Molecular weight: Translated: 38722; Mature: 38591

Theoretical pI: Translated: 8.34; Mature: 8.34

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.5 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
6.0 %Cys+Met (Translated Protein)
2.5 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
5.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTMEVVLIAVVVSVACALCGVFLVLRRISLMSDAISHSVILGIVLGYFLSRTLSSFVPFV
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GAVIAGICSVICAELLQKTGMVKSDAAVGLVFPAMFGLGVILVSLYAGNVHLDTDAVLLG
HHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCEEECCCHHEEC
EIGLAPLDRVSFFAWSLPRSLVQMGSVLCGLLLLLALFFKELKISTFDPVLATSLGFSPT
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHCCCCHH
LINYGLMLAVSITCVGAFDSVGAVLVIALMITPPAAALLLTDNLLLMLVLASLLASCASI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
SGLFLAVKIDGSIAGAMATMAGVLFALVYLFSPKHGVVRRCLVMRALKLDLDVVTLAVHL
CCEEEEEEECCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
ATHRYTVERSXECAEVHLTEHVSWSARRAARVVRTALRRGMVERHGALLLLTAQGVSLAQ
HHHHHHHHCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCHHHH
ARLDVSV
HHHCCCC
>Mature Secondary Structure 
TMEVVLIAVVVSVACALCGVFLVLRRISLMSDAISHSVILGIVLGYFLSRTLSSFVPFV
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GAVIAGICSVICAELLQKTGMVKSDAAVGLVFPAMFGLGVILVSLYAGNVHLDTDAVLLG
HHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCEEECCCHHEEC
EIGLAPLDRVSFFAWSLPRSLVQMGSVLCGLLLLLALFFKELKISTFDPVLATSLGFSPT
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHCCCCHH
LINYGLMLAVSITCVGAFDSVGAVLVIALMITPPAAALLLTDNLLLMLVLASLLASCASI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
SGLFLAVKIDGSIAGAMATMAGVLFALVYLFSPKHGVVRRCLVMRALKLDLDVVTLAVHL
CCEEEEEEECCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
ATHRYTVERSXECAEVHLTEHVSWSARRAARVVRTALRRGMVERHGALLLLTAQGVSLAQ
HHHHHHHHCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCHHHH
ARLDVSV
HHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: Zn (II) [Periplasm]; H2O; ATP [C]

Specific reaction: Zn (II) [Periplasm] + H2O + ATP = Zn (II) [Cytoplasm] + ADP + phosphate [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9332349; 9665876 [H]