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The map label for this gene is troR [C]

Identifier: 189025400

GI number: 189025400

Start: 189653

End: 190114

Strand: Direct

Name: troR [C]

Synonym: TPASS_0167

Alternate gene names: 189025400

Gene position: 189653-190114 (Clockwise)

Preceding gene: 189025399

Following gene: 189025401

Centisome position: 16.64

GC content: 50.87

Gene sequence:

>462_bases
ATGTCGTTAGTGTCAGATATTGCAGCAGAGAATTATTTGAAGACAGTGGTAAAGGCGTTGGCGCGGTCTCGTCGGGAGCG
CGTGGGTACCGGGGAGTTGTCTCGCCTTTTACACGTGACGCCGGGGACTATCAGCACAATGGTGAAGCGCTTGGAAAAGG
GTGGCTATGTGCAACGCACGCATCGTCTTGGCTGTACGTTAACCAGAAAGGGGGCAGTTTTTGGATCTGCAGTGTTAAGG
AAGCATCGCTTGTTGGAGAGTTTTCTTTCCCAGGTATTGTGTTTAGAAGCAGGGGTGGTGCACAAAGAAGCGGAAATGCT
TGAGCATGCGTGTTCTGACGAGCTCATCGACGTTATTGATCGCTATTTGCAGTATCCTACGCGGGATCCTCACGGGCAGC
CGATCCCAAGAAAGGATACGCTTTTGGATTTGTATGTTGAGGACGATGTGCCAGGTGTATGA

Upstream 100 bases:

>100_bases
GCGAGGGATGGTAGAGCGTCACGGTGCCTTGCTGCTACTCACTGCGCAGGGTGTGTCGCTCGCGCAGGCGCGATTGGATG
TATCCGTGTAGGCTGAGTCG

Downstream 100 bases:

>100_bases
TCTTTTTGTATGGGGTGAGGATGCGCCTTTTGTCAGATAAAAGGGGATGTGCAAAACGTATTGTTGAGAGGAGAGGGCCA
TGAAGCTTGTGTTGATCCGT

Product: cation-activated repressor protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 153; Mature: 152

Protein sequence:

>153_residues
MSLVSDIAAENYLKTVVKALARSRRERVGTGELSRLLHVTPGTISTMVKRLEKGGYVQRTHRLGCTLTRKGAVFGSAVLR
KHRLLESFLSQVLCLEAGVVHKEAEMLEHACSDELIDVIDRYLQYPTRDPHGQPIPRKDTLLDLYVEDDVPGV

Sequences:

>Translated_153_residues
MSLVSDIAAENYLKTVVKALARSRRERVGTGELSRLLHVTPGTISTMVKRLEKGGYVQRTHRLGCTLTRKGAVFGSAVLR
KHRLLESFLSQVLCLEAGVVHKEAEMLEHACSDELIDVIDRYLQYPTRDPHGQPIPRKDTLLDLYVEDDVPGV
>Mature_152_residues
SLVSDIAAENYLKTVVKALARSRRERVGTGELSRLLHVTPGTISTMVKRLEKGGYVQRTHRLGCTLTRKGAVFGSAVLRK
HRLLESFLSQVLCLEAGVVHKEAEMLEHACSDELIDVIDRYLQYPTRDPHGQPIPRKDTLLDLYVEDDVPGV

Specific function: In the presence of manganese, it represses the manganese transporter mnth [C]

COG id: COG1321

COG function: function code K; Mn-dependent transcriptional regulator

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH dtxR-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001367
- InterPro:   IPR022689
- InterPro:   IPR022687
- InterPro:   IPR011991 [H]

Pfam domain/function: PF02742 Fe_dep_repr_C; PF01325 Fe_dep_repress [H]

EC number: NA

Molecular weight: Translated: 17122; Mature: 16991

Theoretical pI: Translated: 8.48; Mature: 8.48

Prosite motif: PS50944 HTH_DTXR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSLVSDIAAENYLKTVVKALARSRRERVGTGELSRLLHVTPGTISTMVKRLEKGGYVQRT
CCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCHHHHHHHHHHHCCCHHHH
HRLGCTLTRKGAVFGSAVLRKHRLLESFLSQVLCLEAGVVHKEAEMLEHACSDELIDVID
HHHCCEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHH
RYLQYPTRDPHGQPIPRKDTLLDLYVEDDVPGV
HHHCCCCCCCCCCCCCCCCCEEEEEECCCCCCC
>Mature Secondary Structure 
SLVSDIAAENYLKTVVKALARSRRERVGTGELSRLLHVTPGTISTMVKRLEKGGYVQRT
CHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCHHHHHHHHHHHCCCHHHH
HRLGCTLTRKGAVFGSAVLRKHRLLESFLSQVLCLEAGVVHKEAEMLEHACSDELIDVID
HHHCCEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHH
RYLQYPTRDPHGQPIPRKDTLLDLYVEDDVPGV
HHHCCCCCCCCCCCCCCCCCEEEEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]