Click here to switch to the map view.

The map label for this gene is 188584724

Identifier: 188584724

GI number: 188584724

Start: 99610

End: 100155

Strand: Direct

Name: 188584724

Synonym: Nther_0082

Alternate gene names: NA

Gene position: 99610-100155 (Clockwise)

Preceding gene: 188584723

Following gene: 188584725

Centisome position: 3.15

GC content: 42.67

Gene sequence:

>546_bases
GTGCATAGCAGAGCGATAATTAATAGCAGTACTCGAAAACTTGCTGTAGGCGGATTATTGTCGGCGATCAGCATAGTTAT
GAGCTTTACCCCCCTTGGTTATGTACCAGTGCCTACACCCGCCGGTTCAGTCACTACCATGCATGTTCCAGTCATAATTG
CGGCATTACTAGAAGGGCCTTATATAGGAACTATGGTAGGCAGTATTTTTGGATTAACGAGTTTTATCAGAGGGGCAAAT
TTCTTTGTAGATCCGGTGGTCGCCATTATCCCTAGGTTGTTTATTGGGATGGGGTCTTACTTTGCAATGAGGTTAACAGC
TAGGCTTCTATCTGATAAGACAAAAAGAGATTTTCTCCCCTATGCAGCTGGAGCTTTTACGGGAACAGTTATAAACACAG
CGGGGGTTTTATCACTTGCAACATTACGTGGGTATTTACCTGGCTATGCAGCAGCAGGTGTGGCTGTCAGTCATGGAATA
CCTGAAATCATTGTTGCAATAATCCTTACTATTTTAATTTGTCGCACAGTAAGGAAATTGTATTAA

Upstream 100 bases:

>100_bases
AGCAAGCCTTTATCTTAATATCACAAATGTTTTGAAGAAGAATTTAATAAAAATTAATTGTCCGGCATCCTTTTAAGGAG
CTGGAACGGAGGTGGAAAAA

Downstream 100 bases:

>100_bases
TTTATTGAATTAATATTAAATGTTAGTTGTATTAAACTAGTGTGGTAACAATTTTTTAAAATATCTGAAAATACTGAAGG
AGGGGTTAACTCGTGAAAAG

Product: membrane protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 181; Mature: 181

Protein sequence:

>181_residues
MHSRAIINSSTRKLAVGGLLSAISIVMSFTPLGYVPVPTPAGSVTTMHVPVIIAALLEGPYIGTMVGSIFGLTSFIRGAN
FFVDPVVAIIPRLFIGMGSYFAMRLTARLLSDKTKRDFLPYAAGAFTGTVINTAGVLSLATLRGYLPGYAAAGVAVSHGI
PEIIVAIILTILICRTVRKLY

Sequences:

>Translated_181_residues
MHSRAIINSSTRKLAVGGLLSAISIVMSFTPLGYVPVPTPAGSVTTMHVPVIIAALLEGPYIGTMVGSIFGLTSFIRGAN
FFVDPVVAIIPRLFIGMGSYFAMRLTARLLSDKTKRDFLPYAAGAFTGTVINTAGVLSLATLRGYLPGYAAAGVAVSHGI
PEIIVAIILTILICRTVRKLY
>Mature_181_residues
MHSRAIINSSTRKLAVGGLLSAISIVMSFTPLGYVPVPTPAGSVTTMHVPVIIAALLEGPYIGTMVGSIFGLTSFIRGAN
FFVDPVVAIIPRLFIGMGSYFAMRLTARLLSDKTKRDFLPYAAGAFTGTVINTAGVLSLATLRGYLPGYAAAGVAVSHGI
PEIIVAIILTILICRTVRKLY

Specific function: Unknown

COG id: COG4684

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 19071; Mature: 19071

Theoretical pI: Translated: 10.60; Mature: 10.60

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHSRAIINSSTRKLAVGGLLSAISIVMSFTPLGYVPVPTPAGSVTTMHVPVIIAALLEGP
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCC
YIGTMVGSIFGLTSFIRGANFFVDPVVAIIPRLFIGMGSYFAMRLTARLLSDKTKRDFLP
HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHCCC
YAAGAFTGTVINTAGVLSLATLRGYLPGYAAAGVAVSHGIPEIIVAIILTILICRTVRKL
HHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHH
Y
C
>Mature Secondary Structure
MHSRAIINSSTRKLAVGGLLSAISIVMSFTPLGYVPVPTPAGSVTTMHVPVIIAALLEGP
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCC
YIGTMVGSIFGLTSFIRGANFFVDPVVAIIPRLFIGMGSYFAMRLTARLLSDKTKRDFLP
HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHCCC
YAAGAFTGTVINTAGVLSLATLRGYLPGYAAAGVAVSHGIPEIIVAIILTILICRTVRKL
HHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHH
Y
C

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA